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Lag0036183 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036183
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationchr3:41070879..41071342
RNA-Seq ExpressionLag0036183
SyntenyLag0036183
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148070.1 small ubiquitin-related modifier 1-like [Momordica charantia]9.1e-0643.53Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNN-----LFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+P ++    YV+ KV GQDGSEVYFRVRK T L K++  Y      +      L D   +  +    QL ++DGD IDAM HH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNN-----LFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]2.8e-0748.84Show/hide
Query:  RQPRTQFGS-NYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        R+P  + G+ NYV+ KV GQDGSEVYFR+ K T LSK++K Y       L +    L           D +LGMEDGD+IDAMKHH
Subjt:  RQPRTQFGS-NYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]5.2e-0951.16Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+P  Q G+NYV+ KV GQDGSEVYFR+ K T LSK++K Y       L +    L           D +LGMEDGD IDAMKHH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]8.8e-0950Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+P  + GS YV+ KV GQDGSEVYFR+ K T LS+++K Y       L +    L     V     D +LGMEDGD IDAMKHH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]1.1e-0645.05Show/hide
Query:  RQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF-------QLGMEDGDRIDAMKHHCSTTD
        R+P ++  S YV+ KV GQDGSEVYFR+ K T L K++K Y     G  L  + F+  D           +L MEDGD IDAMKHH   +D
Subjt:  RQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF-------QLGMEDGDRIDAMKHHCSTTD

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 14.9e-0544.71Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIY-----FLWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+   +  S YV+ KV GQDGSEVYFR+ K + LSK++  Y       +S    L D   +       +LG+EDGD IDAMKHH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIY-----FLWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

A0A6J1D1W9 small ubiquitin-related modifier 1-like4.4e-0643.53Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNN-----LFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+P ++    YV+ KV GQDGSEVYFRVRK T L K++  Y      +      L D   +  +    QL ++DGD IDAM HH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNN-----LFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

A0A6J1GLF8 Small ubiquitin-related modifier1.4e-0748.84Show/hide
Query:  RQPRTQFGS-NYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        R+P  + G+ NYV+ KV GQDGSEVYFR+ K T LSK++K Y       L +    L           D +LGMEDGD+IDAMKHH
Subjt:  RQPRTQFGS-NYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

A0A6J1HW85 small ubiquitin-related modifier 1-like isoform X16.4e-0564.29Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIY
        TR+P  Q G+NYV+ KV GQDGSEVYFR+ K T LSK++K Y
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIY

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X22.5e-0951.16Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH
        TR+P  Q G+NYV+ KV GQDGSEVYFR+ K T LSK++K Y       L +    L           D +LGMEDGD IDAMKHH
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF------LWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHH

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.1e-0434.94Show/hide
Query:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVF------VDFDVFDFQLGMEDGDRIDAM
        T Q   +  + +++ KV GQD +EV+F+++KTT  SK++KIY     G ++  + F      +  D    +L MEDGD+I+A+
Subjt:  TRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVF------VDFDVFDFQLGMEDGDRIDAM

P55852 Small ubiquitin-related modifier 12.8e-0540.79Show/hide
Query:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH
        G  +++ KV GQDG+EV+FR++++T L K++  Y    S   N    LFD   +  +    +L MEDGD IDAM H
Subjt:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH

P55857 Small ubiquitin-related modifier 14.7e-0540.79Show/hide
Query:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH
        G  +++ KV GQDG+EV+FR++++T L K++  Y    S   N    LFD   +  +    +L MEDGD IDAM H
Subjt:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH

Q9FLP6 Small ubiquitin-related modifier 28.0e-0536.59Show/hide
Query:  YVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF--------------QLGMEDGDRIDAMKH
        +++ KV GQDG+EV+FR++++T L K++  Y          D   VDF+   F              +L MEDGD IDAM H
Subjt:  YVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF--------------QLGMEDGDRIDAMKH

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 12.0e-0640.79Show/hide
Query:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH
        G  +++ KV GQDG+EV+FR++++T L K++  Y    S   N    LFD   +  +    +L MEDGD IDAM H
Subjt:  GSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYF-LWSFGNN----LFDVVFVDFDVFDFQLGMEDGDRIDAMKH

AT5G55160.1 small ubiquitin-like modifier 25.7e-0636.59Show/hide
Query:  YVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF--------------QLGMEDGDRIDAMKH
        +++ KV GQDG+EV+FR++++T L K++  Y          D   VDF+   F              +L MEDGD IDAM H
Subjt:  YVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDF--------------QLGMEDGDRIDAMKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGACAACCCAGAACACAATTCGGATCGAACTACGTCGACTCCAAGGTCACTGGACAGGATGGGAGTGAGGTCTATTTCAGGGTTCGCAAGACAACTCTGCTAAG
TAAAATGATAAAAATTTATTTTTTGTGGAGTTTTGGTAATAATTTGTTTGACGTTGTTTTTGTTGATTTTGATGTGTTTGATTTTCAACTGGGGATGGAGGATGGAGATC
GAATTGATGCTATGAAACACCACTGCAGCACGACAGACTTTCCTAAACCCCCTCAACTCACCGTTCAAGGACGTCAATCCTTCAAAGCTCTTCCACTCCTCTTTCTCAAC
TGTAAGATTCTCTCTTTCACCATTTCTCGTAACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGACAACCCAGAACACAATTCGGATCGAACTACGTCGACTCCAAGGTCACTGGACAGGATGGGAGTGAGGTCTATTTCAGGGTTCGCAAGACAACTCTGCTAAG
TAAAATGATAAAAATTTATTTTTTGTGGAGTTTTGGTAATAATTTGTTTGACGTTGTTTTTGTTGATTTTGATGTGTTTGATTTTCAACTGGGGATGGAGGATGGAGATC
GAATTGATGCTATGAAACACCACTGCAGCACGACAGACTTTCCTAAACCCCCTCAACTCACCGTTCAAGGACGTCAATCCTTCAAAGCTCTTCCACTCCTCTTTCTCAAC
TGTAAGATTCTCTCTTTCACCATTTCTCGTAACTTGTAA
Protein sequenceShow/hide protein sequence
MTRQPRTQFGSNYVDSKVTGQDGSEVYFRVRKTTLLSKMIKIYFLWSFGNNLFDVVFVDFDVFDFQLGMEDGDRIDAMKHHCSTTDFPKPPQLTVQGRQSFKALPLLFLN
CKILSFTISRNL