; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036193 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036193
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRas-related protein Rab-8A
Genome locationchr3:41218467..41220768
RNA-Seq ExpressionLag0036193
SyntenyLag0036193
Gene Ontology termsGO:0006904 - vesicle docking involved in exocytosis (biological process)
GO:0009306 - protein secretion (biological process)
GO:0017157 - regulation of exocytosis (biological process)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2063690.1 hypothetical protein ES319_A10G234000v1 [Gossypium barbadense]7.5e-2982.72Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

KAG5104368.1 hypothetical protein JHK82_041338 [Glycine max]5.2e-3068.47Show/hide
Query:  NDYEVLSSDGLQSQVP-GFPSLRLARLPEDVKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSK
        +D   L+S GL S+    F    + +  + +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSK
Subjt:  NDYEVLSSDGLQSQVP-GFPSLRLARLPEDVKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSK

Query:  GQALADEYDIK
        GQALADEY IK
Subjt:  GQALADEYDIK

KAG5114742.1 hypothetical protein JHK82_038011 [Glycine max]2.6e-2983.95Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDESKRVVPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

KJB73830.1 hypothetical protein B456_011G255400 [Gossypium raimondii]7.5e-2982.72Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

XP_028555354.1 ras-related protein RABE1c-like isoform X2 [Dendrobium catenatum]1.3e-2882.72Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES+R VPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

TrEMBL top hitse value%identityAlignment
A0A0D2VRP8 Uncharacterized protein3.6e-2982.72Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

A0A1U8NIU9 ras-related protein RABE1c-like3.6e-2991.89Show/hide
Query:  PHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        P TYYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  PHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

A0A2Z6LU31 Uncharacterized protein1.4e-2887.18Show/hide
Query:  ELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        EL+    YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  ELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

A0A4D8ZK63 Ras-related protein Rab-8A1.1e-2890.54Show/hide
Query:  PHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        P  YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  PHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

A0A5J5U7P4 Uncharacterized protein3.6e-2982.72Show/hide
Query:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        +K ++ D   YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  VKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

SwissProt top hitse value%identityAlignment
O24466 Ras-related protein RABE1a6.0e-2988.73Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASD+VNKILVGNKADMDESKR VP SKGQALADEY +K
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

P28186 Ras-related protein RABE1c3.2e-3091.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

Q39433 Ras-related protein RAB1BV3.2e-3091.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

Q9LZD4 Ras-related protein RABE1d1.6e-2988.73Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

Q9SF91 Ras-related protein RABE1e2.7e-2988.73Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNW++NIEQHASD+VNKILVGNKADMDESKR VPTSKGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

Arabidopsis top hitse value%identityAlignment
AT3G46060.1 RAB GTPase homolog 8A2.3e-3191.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

AT3G46060.2 RAB GTPase homolog 8A2.3e-3191.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

AT3G46060.3 RAB GTPase homolog 8A2.3e-3191.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

AT5G03520.1 RAB GTPase homolog 8C1.1e-3088.73Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNW++NIEQHASDNVNKILVGNKADMDESKR VPT+KGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK

AT5G59840.1 Ras-related small GTP-binding family protein5.0e-3191.55Show/hide
Query:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK
        YYRG M ILLVYDVT+ESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKR VP SKGQALADEY IK
Subjt:  YYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTACGAAGTTTTATCTTCGGATGGTTTACAATCGCAGGTCCCTGGATTTCCTTCTTTGAGATTAGCTAGGCTACCAGAAGATGTGAAGAAGGAGCTTGAAGA
CCCTCATACTTACTACCGTGGAGTAATGGACATTCTGCTGGTCTACGATGTAACAAATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAACATTGAACAACATG
CTTCTGATAATGTCAACAAGATATTGGTGGGAAACAAGGCTGACATGGACGAAAGCAAAAGGGTTGTGCCTACATCCAAAGGACAGGCGCTTGCTGATGAGTACGACATC
AAATCCTTACTCATCCAGCCTTGGGCCATGGTGACTTGGGAATCTGAGGGAAGTGATTCAGTTGTACATTCAAAAGAATGTGGCGCTTTGTATCAGTTCTTAAATGGAAT
CCCAGTGATAACTACTGCTAATTTTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTACGAAGTTTTATCTTCGGATGGTTTACAATCGCAGGTCCCTGGATTTCCTTCTTTGAGATTAGCTAGGCTACCAGAAGATGTGAAGAAGGAGCTTGAAGA
CCCTCATACTTACTACCGTGGAGTAATGGACATTCTGCTGGTCTACGATGTAACAAATGAATCATCTTTCAACAATATTAGAAATTGGATTCGCAACATTGAACAACATG
CTTCTGATAATGTCAACAAGATATTGGTGGGAAACAAGGCTGACATGGACGAAAGCAAAAGGGTTGTGCCTACATCCAAAGGACAGGCGCTTGCTGATGAGTACGACATC
AAATCCTTACTCATCCAGCCTTGGGCCATGGTGACTTGGGAATCTGAGGGAAGTGATTCAGTTGTACATTCAAAAGAATGTGGCGCTTTGTATCAGTTCTTAAATGGAAT
CCCAGTGATAACTACTGCTAATTTTACCTGA
Protein sequenceShow/hide protein sequence
MNDYEVLSSDGLQSQVPGFPSLRLARLPEDVKKELEDPHTYYRGVMDILLVYDVTNESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRVVPTSKGQALADEYDI
KSLLIQPWAMVTWESEGSDSVVHSKECGALYQFLNGIPVITTANFT