CuGenDBv2

Gene ID	Lag0036211
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein SHOOT GRAVITROPISM 6
Genome location	chr3:41643239..41644192
RNA-Seq Expression	Lag0036211
Synteny	Lag0036211
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143882.1 protein SHOOT GRAVITROPISM 6 [Momordica charantia]

3.2e-16

79.1

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Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKIEDR+DP S K+LAGL
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

XP_022143882.1 protein SHOOT GRAVITROPISM 6 [Momordica charantia]

4.6e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        ++ESDDIH ALALMYGYAAKY+PSTVIEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

XP_022143882.1 protein SHOOT GRAVITROPISM 6 [Momordica charantia]

1.3e-14

77.61

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Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

XP_022925798.1 protein SHOOT GRAVITROPISM 6 isoform X4 [Cucurbita moschata]

2.7e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

XP_022977462.1 protein SHOOT GRAVITROPISM 6 isoform X3 [Cucurbita maxima]

2.7e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

XP_022977462.1 protein SHOOT GRAVITROPISM 6 isoform X3 [Cucurbita maxima]

1.3e-14

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

XP_022977463.1 protein SHOOT GRAVITROPISM 6 isoform X4 [Cucurbita maxima]

2.7e-07

88.57

Show/hide

Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

XP_022977463.1 protein SHOOT GRAVITROPISM 6 isoform X4 [Cucurbita maxima]

1.3e-14

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

XP_023543667.1 protein SHOOT GRAVITROPISM 6 isoform X2 [Cucurbita pepo subsp. pepo]

2.7e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

XP_023543667.1 protein SHOOT GRAVITROPISM 6 isoform X2 [Cucurbita pepo subsp. pepo]

1.3e-14

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CS52 protein SHOOT GRAVITROPISM 6

1.5e-16

79.1

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKIEDR+DP S K+LAGL
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

A0A6J1CS52 protein SHOOT GRAVITROPISM 6

2.2e-07

88.57

Show/hide

Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        ++ESDDIH ALALMYGYAAKY+PSTVIEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

A0A6J1CS52 protein SHOOT GRAVITROPISM 6

6.5e-15

77.61

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Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

A0A6J1IIH9 protein SHOOT GRAVITROPISM 6 isoform X3

1.3e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

A0A6J1IJZ3 protein SHOOT GRAVITROPISM 6 isoform X2

1.3e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

A0A6J1IJZ3 protein SHOOT GRAVITROPISM 6 isoform X2

6.5e-15

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

A0A6J1IMD7 protein SHOOT GRAVITROPISM 6 isoform X1

1.3e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

A0A6J1IMD7 protein SHOOT GRAVITROPISM 6 isoform X1

6.5e-15

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

A0A6J1IQ24 protein SHOOT GRAVITROPISM 6 isoform X4

1.3e-07

88.57

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Query:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        +EESDDIH ALALMYGYAAKY+PST+IEARIDALV
Subjt:  EEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

A0A6J1IQ24 protein SHOOT GRAVITROPISM 6 isoform X4

6.5e-15

77.61

Show/hide

Query:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL
        +EAVKSLLDEQNLGVRKALSELIV MA HC+LV SS EMFVE+LV   AIKI DRNDP S K+LAG+
Subjt:  SEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGL

SwissProt top hits

e value

%identity

Alignment

F4IP13 Protein SHOOT GRAVITROPISM 6

4.6e-10

52.24

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Query:  VLELYEVVTHELFSSVLREQFDIWNILVRVLNEEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        VLE  +++   +  S+ +    I ++       E+SDDIH ALALMYGYAAKY+PS+VIEARIDALV
Subjt:  VLELYEVVTHELFSSVLREQFDIWNILVRVLNEEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

F4IP13 Protein SHOOT GRAVITROPISM 6

5.1e-09

38.39

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Query:  EAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLRRELDKGAAKAVLELYEVVTHEL-FSSVLRE
        +   SLLDEQ+L VRKALSELIV MA HC+LV  S E+FVE+LV  +AI   D    K   +L     LR    KG     + + E+   +      ++ 
Subjt:  EAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLRRELDKGAAKAVLELYEVVTHEL-FSSVLRE

Query:  QFDIWNILVRVL
        Q+ +W  L++++
Subjt:  QFDIWNILVRVL

Q9SJM0 Callose synthase 10

2.8e-07

64.29

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Query:  ELDKGAAKAVLELYEVVTHELFSSVLREQFDIWNILVRVLNE
        +L KGAAKA+ + YEVVTH+L S  LREQ D WNIL R  NE
Subjt:  ELDKGAAKAVLELYEVVTHELFSSVLREQFDIWNILVRVLNE

Arabidopsis top hits

e value

%identity

Alignment

AT2G36810.1 ARM repeat superfamily protein

3.3e-11

52.24

Show/hide

Query:  VLELYEVVTHELFSSVLREQFDIWNILVRVLNEEESDDIHTALALMYGYAAKYSPSTVIEARIDALV
        VLE  +++   +  S+ +    I ++       E+SDDIH ALALMYGYAAKY+PS+VIEARIDALV
Subjt:  VLELYEVVTHELFSSVLREQFDIWNILVRVLNEEESDDIHTALALMYGYAAKYSPSTVIEARIDALV

AT2G36810.1 ARM repeat superfamily protein

3.6e-10

38.39

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Query:  EAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLRRELDKGAAKAVLELYEVVTHEL-FSSVLRE
        +   SLLDEQ+L VRKALSELIV MA HC+LV  S E+FVE+LV  +AI   D    K   +L     LR    KG     + + E+   +      ++ 
Subjt:  EAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLRRELDKGAAKAVLELYEVVTHEL-FSSVLRE

Query:  QFDIWNILVRVL
        Q+ +W  L++++
Subjt:  QFDIWNILVRVL

AT2G36850.1 glucan synthase-like 8

2.0e-08

64.29

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Query:  ELDKGAAKAVLELYEVVTHELFSSVLREQFDIWNILVRVLNE
        +L KGAAKA+ + YEVVTH+L S  LREQ D WNIL R  NE
Subjt:  ELDKGAAKAVLELYEVVTHELFSSVLREQFDIWNILVRVLNE

Sequences

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CDS sequence

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ATGGAATCTGAAGCTGTAAAGTCCTTGCTTGACGAGCAAAACCTAGGTGTTAGAAAGGCACTTTCAGAGTTGATTGTGGAAATGGCGTTCCATTGCTTCCTGGTTGTTTC
ATCTAAAGAAATGTTTGTTGAGTTTCTTGTGAGTCTCACTGCCATCAAAATTGAAGACAGAAATGATCCTAAAAGTTTAAAGGACTTAGCTGGGTTGAAAGACTTGAGAA
GAGAACTTGATAAAGGTGCTGCAAAAGCTGTATTAGAGCTTTATGAGGTTGTTACGCATGAGCTGTTTTCATCAGTTTTGAGGGAGCAGTTTGACATATGGAATATTTTG
GTGAGGGTTTTAAATGAAGAGGAGTCTGATGACATACATACTGCTTTGGCTCTCATGTATGGATATGCTGCAAAATATTCTCCATCGACAGTTATTGAGGCCAGGATAGA
TGCACTTGTTCTCTTCTAA

mRNA sequence

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Protein sequence

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MESEAVKSLLDEQNLGVRKALSELIVEMAFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLRRELDKGAAKAVLELYEVVTHELFSSVLREQFDIWNIL
VRVLNEEESDDIHTALALMYGYAAKYSPSTVIEARIDALVLF

Lag0036211 (gene) of Sponge gourd (AG-4) v1 genome