; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036222 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036222
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionKeratin, type I cytoskeletal 10-like
Genome locationchr3:41874964..41875534
RNA-Seq ExpressionLag0036222
SyntenyLag0036222
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039074.1 keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa]1.4e-0440Show/hide
Query:  EAEEKIEGENSGSNSGSV--------NIPVNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPI---DEIEAGDDCEGIQA
        E E  +EGE++      V          P  R++ LF MRL KL+VPIFKG+E E++D WLH VER   V+ +   D++EA   C  ++A
Subjt:  EAEEKIEGENSGSNSGSV--------NIPVNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPI---DEIEAGDDCEGIQA

TYJ97047.1 aminoacyl-tRNA ligase [Cucumis melo var. makuwa]5.4e-0447.46Show/hide
Query:  MRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPIDEIEAGDDCEGIQATIRTICFGGE
        MRLRKL+VPIFKG+E + +DGWLHRVER   V+ + E +  D        +  +C+ GE
Subjt:  MRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPIDEIEAGDDCEGIQATIRTICFGGE

XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]5.9e-1136.54Show/hide
Query:  MVGKMEGKINEIEEKMASMQTGLEERMNEKLGLINEKMEALCKTIEILGALGLGPSEKNQTDKEK-GKKIAVSNVREAEEKIEGE---NSGSNSGSVNIP
        MV KME +++ +EE++  +Q G+E RM+++   + +  E++   I  + ALG    +K     E   KK+ +  ++E E     +   + G      ++ 
Subjt:  MVGKMEGKINEIEEKMASMQTGLEERMNEKLGLINEKMEALCKTIEILGALGLGPSEKNQTDKEK-GKKIAVSNVREAEEKIEGE---NSGSNSGSVNIP

Query:  VNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERR---GSVSPIDEIEAGDDC
          REV LFDMRLRKL++PIFKG+ GED  GW HRVER      +S  D+IEA   C
Subjt:  VNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERR---GSVSPIDEIEAGDDC

TrEMBL top hitse value%identityAlignment
A0A5A7T6F9 Keratin, type I cytoskeletal 10-like6.9e-0540Show/hide
Query:  EAEEKIEGENSGSNSGSV--------NIPVNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPI---DEIEAGDDCEGIQA
        E E  +EGE++      V          P  R++ LF MRL KL+VPIFKG+E E++D WLH VER   V+ +   D++EA   C  ++A
Subjt:  EAEEKIEGENSGSNSGSV--------NIPVNREVSLFDMRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPI---DEIEAGDDCEGIQA

A0A5D3BD43 Aminoacyl-tRNA ligase2.6e-0447.46Show/hide
Query:  MRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPIDEIEAGDDCEGIQATIRTICFGGE
        MRLRKL+VPIFKG+E + +DGWLHRVER   V+ + E +  D        +  +C+ GE
Subjt:  MRLRKLDVPIFKGKEGEDLDGWLHRVERRGSVSPIDEIEAGDDCEGIQATIRTICFGGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTAAGATGGAAGGGAAAATTAACGAGATAGAGGAGAAGATGGCATCGATGCAAACTGGGCTGGAGGAACGTATGAATGAGAAGCTAGGATTGATCAACGAGAA
AATGGAAGCGCTATGTAAGACGATTGAGATACTGGGCGCATTAGGGCTTGGCCCTTCTGAGAAAAATCAAACTGATAAGGAAAAAGGGAAAAAAATAGCTGTGAGTAATG
TGAGAGAGGCGGAGGAAAAAATTGAAGGGGAAAATTCCGGCAGTAATAGCGGAAGCGTGAACATACCTGTGAACCGTGAGGTGTCGTTGTTTGATATGCGGCTAAGGAAG
CTGGACGTTCCGATCTTCAAAGGCAAAGAAGGAGAAGACCTGGATGGTTGGCTGCATCGGGTGGAAAGACGGGGATCAGTATCACCGATTGATGAGATTGAAGCAGGAGA
CGACTGTGAGGGAATACAGGCGACGATTCGAACAATATGCTTCGGCGGTGAAGGGGGTGCCAGCGGCTATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTAAGATGGAAGGGAAAATTAACGAGATAGAGGAGAAGATGGCATCGATGCAAACTGGGCTGGAGGAACGTATGAATGAGAAGCTAGGATTGATCAACGAGAA
AATGGAAGCGCTATGTAAGACGATTGAGATACTGGGCGCATTAGGGCTTGGCCCTTCTGAGAAAAATCAAACTGATAAGGAAAAAGGGAAAAAAATAGCTGTGAGTAATG
TGAGAGAGGCGGAGGAAAAAATTGAAGGGGAAAATTCCGGCAGTAATAGCGGAAGCGTGAACATACCTGTGAACCGTGAGGTGTCGTTGTTTGATATGCGGCTAAGGAAG
CTGGACGTTCCGATCTTCAAAGGCAAAGAAGGAGAAGACCTGGATGGTTGGCTGCATCGGGTGGAAAGACGGGGATCAGTATCACCGATTGATGAGATTGAAGCAGGAGA
CGACTGTGAGGGAATACAGGCGACGATTCGAACAATATGCTTCGGCGGTGAAGGGGGTGCCAGCGGCTATGCTTGA
Protein sequenceShow/hide protein sequence
MVGKMEGKINEIEEKMASMQTGLEERMNEKLGLINEKMEALCKTIEILGALGLGPSEKNQTDKEKGKKIAVSNVREAEEKIEGENSGSNSGSVNIPVNREVSLFDMRLRK
LDVPIFKGKEGEDLDGWLHRVERRGSVSPIDEIEAGDDCEGIQATIRTICFGGEGGASGYA