; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036241 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036241
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr3:42346504..42347235
RNA-Seq ExpressionLag0036241
SyntenyLag0036241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA97687.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]1.2e-1238.61Show/hide
Query:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI
        +GKGD   FWDD WIG  PLK+ +  +Y +   KE  +   WN  E +WN+HLRR+L   E+ EW  L   L   +     DI  W+L+ +G ++  SL 
Subjt:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI

Query:  K
        +
Subjt:  K

EAZ20332.1 hypothetical protein OsJ_35941 [Oryza sativa Japonica Group]1.2e-1238.61Show/hide
Query:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI
        +GKGD   FWDD WIG  PLK+ +  +Y +   KE  +   WN  E +WN+HLRR+L   E+ EW  L   L   +     DI  W+L+ +G ++  SL 
Subjt:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI

Query:  K
        +
Subjt:  K

KAE8687175.1 hypothetical protein F3Y22_tig00111022pilonHSYRG00184 [Hibiscus syriacus]1.0e-1131.69Show/hide
Query:  IRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVD--LWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKEL-EDIWFWQLDSNGFFS
        +R G G+   FW D W+GS PLK  +  L+ LS  KE  + +  L N S   W++ +RRNL + E+ +W  +   L+S S   + ED W W  +  G F+
Subjt:  IRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVD--LWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKEL-EDIWFWQLDSNGFFS

Query:  SGSLIKKW--ASTVQPNRNAFYDQLWKGPSRKRLNSSCGSLA
        + S +K +     +    + +   +WKG +  R+ S    LA
Subjt:  SGSLIKKW--ASTVQPNRNAFYDQLWKGPSRKRLNSSCGSLA

KAG5622081.1 hypothetical protein H5410_007299 [Solanum commersonii]1.3e-1141Show/hide
Query:  RVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFS-FKELEDIWFWQLDSNGFFSSGS
        +VG G K +FW D W G  PL   +  LY L Q ++A + +LWN  ++ WNLH RRNL + E+   T   +TL  FS   E ED   W + S G F+  S
Subjt:  RVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFS-FKELEDIWFWQLDSNGFFSSGS

XP_022155195.1 uncharacterized protein LOC111022333 [Momordica charantia]3.4e-1230.3Show/hide
Query:  YTEIRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFS
        +   ++G GD  LFW   WI ++PLK  ++ +Y++S      +V+ W++   +W +  RR L ++EI E++ L   L S S     D   W L+ +G FS
Subjt:  YTEIRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFS

Query:  SGSLIKKWASTVQPNRNAFYDQLWKGPSRKRL
          S+ K  +++  P   A +  +WK  S K++
Subjt:  SGSLIKKWASTVQPNRNAFYDQLWKGPSRKRL

TrEMBL top hitse value%identityAlignment
A0A0V0IE94 Putative ovule protein6.3e-1241Show/hide
Query:  RVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFS-FKELEDIWFWQLDSNGFFSSGS
        +VG G K  FW D W G  PL   +  LY L Q ++A + +LWN  ++ WNLH RRNL + E+   T   +TL+ FS   E ED   W + S G F+  S
Subjt:  RVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFS-FKELEDIWFWQLDSNGFFSSGS

A0A6A2Z7T3 RNase H domain-containing protein4.8e-1231.69Show/hide
Query:  IRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVD--LWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKEL-EDIWFWQLDSNGFFS
        +R G G+   FW D W+GS PLK  +  L+ LS  KE  + +  L N S   W++ +RRNL + E+ +W  +   L+S S   + ED W W  +  G F+
Subjt:  IRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVD--LWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKEL-EDIWFWQLDSNGFFS

Query:  SGSLIKKW--ASTVQPNRNAFYDQLWKGPSRKRLNSSCGSLA
        + S +K +     +    + +   +WKG +  R+ S    LA
Subjt:  SGSLIKKW--ASTVQPNRNAFYDQLWKGPSRKRLNSSCGSLA

A0A6J1DLR8 uncharacterized protein LOC1110223331.7e-1230.3Show/hide
Query:  YTEIRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFS
        +   ++G GD  LFW   WI ++PLK  ++ +Y++S      +V+ W++   +W +  RR L ++EI E++ L   L S S     D   W L+ +G FS
Subjt:  YTEIRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFS

Query:  SGSLIKKWASTVQPNRNAFYDQLWKGPSRKRL
          S+ K  +++  P   A +  +WK  S K++
Subjt:  SGSLIKKWASTVQPNRNAFYDQLWKGPSRKRL

A3CGW9 Uncharacterized protein5.7e-1338.61Show/hide
Query:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI
        +GKGD   FWDD WIG  PLK+ +  +Y +   KE  +   WN  E +WN+HLRR+L   E+ EW  L   L   +     DI  W+L+ +G ++  SL 
Subjt:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI

Query:  K
        +
Subjt:  K

Q2QSD3 Retrotransposon protein, putative, unclassified5.7e-1338.61Show/hide
Query:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI
        +GKGD   FWDD WIG  PLK+ +  +Y +   KE  +   WN  E +WN+HLRR+L   E+ EW  L   L   +     DI  W+L+ +G ++  SL 
Subjt:  VGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGSLI

Query:  K
        +
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATTTGTTTACAACTATACAGAAATCAGAGTAGGGAAAGGTGATAAAACCTTGTTCTGGGATGACCACTGGATTGGGAGTGAACCTCTAAAATCTTCATACAC
CTCCCTTTATAGGCTTTCCCAAAAAAAGGAAGCCCTCATTGTGGATCTTTGGAACTCATCGGAAGAAGCATGGAACCTTCACTTGCGAAGAAACCTCACTGAAGAGGAAA
TTCTTGAATGGACCTCTTTGTCTCTCACTCTCTCCTCTTTCTCCTTTAAAGAGCTGGAGGACATTTGGTTTTGGCAACTTGATAGCAATGGATTTTTCTCCTCGGGCTCC
CTAATCAAAAAATGGGCCTCCACTGTACAGCCCAACAGAAATGCTTTTTATGATCAATTATGGAAGGGACCTAGCCGAAAAAGGTTAAATTCTTCTTGTGGGAGCTTAGC
CATGAGTGTATTAACACAGCTGATATGGTCCAGAGAAAAAATCCAGGTTTATCCATCTCCCCACACTGCTGATGCCTCTGCTATAAGGATTCTGAATCTCAAGCCCATTT
ATTCAGTAAATATTTCTTTAGCCTTTTGGAAAGAAATGCCCGTATTTTTTCGGATAGGAGTCAAATCATTAGCGCCTTCATTGAATCTACATCCTACCTTGCTTTGTATT
GGAGTAGTCACTCCCCCTTTTTGTAATTATTCCCTATCCACTCTTTTGCATCACTGGAGATCTCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATTTGTTTACAACTATACAGAAATCAGAGTAGGGAAAGGTGATAAAACCTTGTTCTGGGATGACCACTGGATTGGGAGTGAACCTCTAAAATCTTCATACAC
CTCCCTTTATAGGCTTTCCCAAAAAAAGGAAGCCCTCATTGTGGATCTTTGGAACTCATCGGAAGAAGCATGGAACCTTCACTTGCGAAGAAACCTCACTGAAGAGGAAA
TTCTTGAATGGACCTCTTTGTCTCTCACTCTCTCCTCTTTCTCCTTTAAAGAGCTGGAGGACATTTGGTTTTGGCAACTTGATAGCAATGGATTTTTCTCCTCGGGCTCC
CTAATCAAAAAATGGGCCTCCACTGTACAGCCCAACAGAAATGCTTTTTATGATCAATTATGGAAGGGACCTAGCCGAAAAAGGTTAAATTCTTCTTGTGGGAGCTTAGC
CATGAGTGTATTAACACAGCTGATATGGTCCAGAGAAAAAATCCAGGTTTATCCATCTCCCCACACTGCTGATGCCTCTGCTATAAGGATTCTGAATCTCAAGCCCATTT
ATTCAGTAAATATTTCTTTAGCCTTTTGGAAAGAAATGCCCGTATTTTTTCGGATAGGAGTCAAATCATTAGCGCCTTCATTGAATCTACATCCTACCTTGCTTTGTATT
GGAGTAGTCACTCCCCCTTTTTGTAATTATTCCCTATCCACTCTTTTGCATCACTGGAGATCTCTTTTGTAA
Protein sequenceShow/hide protein sequence
MKQFVYNYTEIRVGKGDKTLFWDDHWIGSEPLKSSYTSLYRLSQKKEALIVDLWNSSEEAWNLHLRRNLTEEEILEWTSLSLTLSSFSFKELEDIWFWQLDSNGFFSSGS
LIKKWASTVQPNRNAFYDQLWKGPSRKRLNSSCGSLAMSVLTQLIWSREKIQVYPSPHTADASAIRILNLKPIYSVNISLAFWKEMPVFFRIGVKSLAPSLNLHPTLLCI
GVVTPPFCNYSLSTLLHHWRSLL