| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-64 | 49.42 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESM+V T KS SK K + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKK
LK+LI KL E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF + ++
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKK
Query: KENLA--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTN
E A T+ + V EE+DNS + +QRTSVFD IKP TTR SVF R+SMA +EENQC T + S F+RLS+S SKK R ST FDRLK+TN
Subjt: KENLA--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTN
Query: DQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTKGSL
DQ +R+M L+ K F E N D K+HS +PSRMKRK SV INT+GSL
Subjt: DQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTKGSL
|
|
| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 4.3e-66 | 43.77 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESM+V T KS SK K + + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+LPKCKRPE+ KVDDP YCKYHRVI H VE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------------------------------------------
LK+LILKL E KIELD+DEVAQ+N
Subjt: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------------------------------------------
Query: ---------LATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVF
I K K +R K K +P + + + F QP+Q + L + F ++F KE L + C + EEVDNS + +QRTSVF
Subjt: ---------LATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVF
Query: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
DRIKP TTR SVF R+S+ EEENQC ST R S F+ LS+STSKK R STS FDRLK+ NDQ +R+M +L++K F E N D K+HS +PSRMKRK S
Subjt: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
Query: VLINTKGSL
V INT+GSL
Subjt: VLINTKGSL
|
|
| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.6e-67 | 54.06 | Show/hide |
Query: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
I+ESMVV+ T KS SK K R+ +G TLKERQ+K+YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
LK+LILKL E+KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + N +S +EV+N
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
Query: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
S + QRTSVFDRIKP TTR SVF R+S+A EEENQC R S +RLS+ST KK R STS FDRLK+TNDQ +R+M + + K F E N D K+HS
Subjt: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
Query: SIPSRMKRKFSVLINTKGSL
+PSRMKRK V INT+GSL
Subjt: SIPSRMKRKFSVLINTKGSL
|
|
| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.4e-63 | 51.88 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESMVV T KS SK K + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
LK+LILKL E KI+LD+DE + KD LQP+R RS P++++ + + + + +N SY EEVDN
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
Query: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
S + +QRTSVFDRIKP TTR VF R+SMA EEENQC ST R S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +L+ K F E N D K+HS
Subjt: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
Query: SIPSRMKRKFSVLINTKGSL
IPS RK SV IN +GSL
Subjt: SIPSRMKRKFSVLINTKGSL
|
|
| TYK04576.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.2e-64 | 43.65 | Show/hide |
Query: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
I+ESMVV+ T KS SK K R+ +G TLKERQKK+YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRKKD---------------PKKLQ-
LK+LILKL E+KIELD+DEVAQ+N + TI ++K KD P +Q
Subjt: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRKKD---------------PKKLQ-
Query: ----------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVF
K +R+KK F Q ++ + L + ++F H ++ + + ++ EVD NS + QRTSVF
Subjt: ----------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVF
Query: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
DRIKP TTR SVF R+SMA EEENQC R S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +L+ K F E N D K+HS +PSRMKRK S
Subjt: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
Query: VLINTKGSLKFLLSKFE
V INT+G++ LL +
Subjt: VLINTKGSLKFLLSKFE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.5e-64 | 49.42 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESM+V T KS SK K + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+LP+CKRPE++ KVDDP YCKYHRVI H VE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKK
LK+LI KL E KIELD+DEVAQ+N + S QRK +P ++ ++K SQ ++ + L +SF + ++
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSK--------HQRKK-------DPKKLQPKRKRSKKFSQPQQ----------LVMLNKSFSKTFHKKK
Query: KENLA--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTN
E A T+ + V EE+DNS + +QRTSVFD IKP TTR SVF R+SMA +EENQC T + S F+RLS+S SKK R ST FDRLK+TN
Subjt: KENLA--TSYCINV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTN
Query: DQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTKGSL
DQ +R+M L+ K F E N D K+HS +PSRMKRK SV INT+GSL
Subjt: DQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTKGSL
|
|
| A0A5A7TGM1 Retrotransposon gag protein | 2.1e-66 | 43.77 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESM+V T KS SK K + + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+LPKCKRPE+ KVDDP YCKYHRVI H VE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------------------------------------------
LK+LILKL E KIELD+DEVAQ+N
Subjt: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------------------------------------------
Query: ---------LATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVF
I K K +R K K +P + + + F QP+Q + L + F ++F KE L + C + EEVDNS + +QRTSVF
Subjt: ---------LATIKEKSKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKKKENLATSYC------------INVEEVDNSKKSEQRTSVF
Query: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
DRIKP TTR SVF R+S+ EEENQC ST R S F+ LS+STSKK R STS FDRLK+ NDQ +R+M +L++K F E N D K+HS +PSRMKRK S
Subjt: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
Query: VLINTKGSL
V INT+GSL
Subjt: VLINTKGSL
|
|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 3.2e-67 | 54.06 | Show/hide |
Query: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
I+ESMVV+ T KS SK K R+ +G TLKERQ+K+YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
LK+LILKL E+KIELD+DEVAQ+N A I+ S + KD LQ +R RS P++++ + + + + N +S +EV+N
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
Query: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
S + QRTSVFDRIKP TTR SVF R+S+A EEENQC R S +RLS+ST KK R STS FDRLK+TNDQ +R+M + + K F E N D K+HS
Subjt: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
Query: SIPSRMKRKFSVLINTKGSL
+PSRMKRK V INT+GSL
Subjt: SIPSRMKRKFSVLINTKGSL
|
|
| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 1.6e-63 | 51.88 | Show/hide |
Query: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
+ ESMVV T KS SK K + +H TL+ERQKK+YPFPD D+ DMLEQL+E QLI+L CKRP + KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEKRQTNGAHH-------LTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
LK+LILKL E KI+LD+DE + KD LQP+R RS P++++ + + + + +N SY EEVDN
Subjt: LKDLILKLVMERKIELDLDEVAQSNLATIKEKSKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSKTFHKKKKENLATSYCINVEEVDN
Query: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
S + +QRTSVFDRIKP TTR VF R+SMA EEENQC ST R S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +L+ K F E N D K+HS
Subjt: SKKSEQRTSVFDRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHS
Query: SIPSRMKRKFSVLINTKGSL
IPS RK SV IN +GSL
Subjt: SIPSRMKRKFSVLINTKGSL
|
|
| A0A5D3C2C8 Retrotransposon gag protein | 2.5e-64 | 43.65 | Show/hide |
Query: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
I+ESMVV+ T KS SK K R+ +G TLKERQKK+YPFPD D+ DMLEQLLE QLI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFV
Subjt: IEESMVVNTTLPKSSSKEK-----RQTNG--AHHLTLKERQKKIYPFPDVDIPDMLEQLLEAQLIKLPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFV
Query: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRKKD---------------PKKLQ-
LK+LILKL E+KIELD+DEVAQ+N + TI ++K KD P +Q
Subjt: LKDLILKLVMERKIELDLDEVAQSN---------------------------------------LATIKEKSKHQRKKD---------------PKKLQ-
Query: ----------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVF
K +R+KK F Q ++ + L + ++F H ++ + + ++ EVD NS + QRTSVF
Subjt: ----------------PKRKRSKK-------------FSQPQQLVMLNKSFSKTF---HKKKKENLATSYCINVEEVD----------NSKKSEQRTSVF
Query: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
DRIKP TTR SVF R+SMA EEENQC R S F+RLS+STSKK R STS FDRLK+ NDQ +R+M +L+ K F E N D K+HS +PSRMKRK S
Subjt: DRIKPPTTRPSVFHRMSMAATEEENQCSMSTSIRPSPFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFS
Query: VLINTKGSLKFLLSKFE
V INT+G++ LL +
Subjt: VLINTKGSLKFLLSKFE
|
|
