; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036256 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036256
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationchr3:42705135..42705545
RNA-Seq ExpressionLag0036256
SyntenyLag0036256
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050888.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]2.4e-3974.58Show/hide
Query:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        M +NWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAA+KCH ENRRTLNGDDIYWAFGSLGLDNYAEAS+  LLKFREAERIK+
Subjt:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

Query:  CNKASRFQEREDDDDDDD
         +KA  FQ  +   +D +
Subjt:  CNKASRFQEREDDDDDDD

KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3970.99Show/hide
Query:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC
        E+N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECATEFISFVTSEAAEKCHK+NRRTLNGDDI WAFGS GLDNYAEASAKYLLK+R+ ERI + 
Subjt:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC

Query:  NKASRFQEREDDDDDDDDE-EFYRANKGESS
         K +   E++  D + + E EFY    GE+S
Subjt:  NKASRFQEREDDDDDDDDE-EFYRANKGESS

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]1.1e-3971.09Show/hide
Query:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        M +NWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAA+KCH ENRRTLNGDDIYWAFGSLGLDNYAEAS+  LLKFREAERIK+
Subjt:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

Query:  CNKASRFQEREDDDDDDDDEEFYRANKG
         +KA  FQ  +    +D D  F+  ++G
Subjt:  CNKASRFQEREDDDDDDDDEEFYRANKG

XP_022145916.1 nuclear transcription factor Y subunit B-4-like [Momordica charantia]4.8e-4875.18Show/hide
Query:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC
        +DNWE+LQLPSANVGRLMKKI+PQTSKISKEAKQTMQECATEFISFVTSEAAEKC++ENRRTLNG+DIYWAFG+LGLDNYA+A+AKYLL +R+A+ +K  
Subjt:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC

Query:  NKASRFQERED----DDDDDDDEEFYRANKGESSRTN
        NK   FQ++ +    DD+ DDD +FY ANKGESS+TN
Subjt:  NKASRFQERED----DDDDDDDEEFYRANKGESSRTN

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.0e-4277.69Show/hide
Query:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        M +NWE LQLP ANVGR+MKKILPQ +KISKEAK+TMQECA+EFISFV SEAAEKCHKENRRTLNGDDI WA GS GLDNYAE SAKYLLKFREAERIK+
Subjt:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

Query:  CNKASRFQEREDDDDDDDDEE
         NKA  FQ      +DDD++E
Subjt:  CNKASRFQEREDDDDDDDDEE

TrEMBL top hitse value%identityAlignment
A0A1S3BQ87 Beta-galactosidase5.2e-4071.09Show/hide
Query:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        M +NWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAA+KCH ENRRTLNGDDIYWAFGSLGLDNYAEAS+  LLKFREAERIK+
Subjt:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

Query:  CNKASRFQEREDDDDDDDDEEFYRANKG
         +KA  FQ  +    +D D  F+  ++G
Subjt:  CNKASRFQEREDDDDDDDDEEFYRANKG

A0A5D3CFV4 Beta-galactosidase 15-like1.2e-3974.58Show/hide
Query:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        M +NWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAA+KCH ENRRTLNGDDIYWAFGSLGLDNYAEAS+  LLKFREAERIK+
Subjt:  MEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

Query:  CNKASRFQEREDDDDDDD
         +KA  FQ  +   +D +
Subjt:  CNKASRFQEREDDDDDDD

A0A6J1CXT8 nuclear transcription factor Y subunit B-4-like2.3e-4875.18Show/hide
Query:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC
        +DNWE+LQLPSANVGRLMKKI+PQTSKISKEAKQTMQECATEFISFVTSEAAEKC++ENRRTLNG+DIYWAFG+LGLDNYA+A+AKYLL +R+A+ +K  
Subjt:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC

Query:  NKASRFQERED----DDDDDDDEEFYRANKGESSRTN
        NK   FQ++ +    DD+ DDD +FY ANKGESS+TN
Subjt:  NKASRFQERED----DDDDDDDEEFYRANKGESSRTN

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like7.5e-3970.77Show/hide
Query:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC
        E+N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECATEFISFVTSEAAEKCHK+NRRTLNGDDI WAFGS GLDNYAEASAKYLLK+R+ ERI + 
Subjt:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC

Query:  NKASRFQEREDDDDDDDDEEFYRANKGESS
         K +   E++     D + EFY    GE+S
Subjt:  NKASRFQEREDDDDDDDDEEFYRANKGESS

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like2.6e-3966.67Show/hide
Query:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC
        E+N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECATEFISFVTSEAAEKCHK+NRRTLNGDDI WAFGS GLDNYAEASAKYLLK+R+ ERI + 
Subjt:  EDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSC

Query:  NKAS-----------RFQEREDDDDDDDDEEFYRANKGESS
         K +           R QE+E + + + + EFY    GE+S
Subjt:  NKAS-----------RFQEREDDDDDDDDEEFYRANKGESS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-42.1e-3059.69Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS-CNKASRFQ
        LP ANVGRLMK+ILP  +KISKEAKQT+QECATEFISFVT EA+EKCH+ENR+T+NGDDI+WA  +LGLDNYA+A  ++L K+REAER ++  NK S   
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS-CNKASRFQ

Query:  EREDD-----DDDDDDEEFYR-ANKGESS
          E +     D  +   +F R   KG SS
Subjt:  EREDD-----DDDDDDEEFYR-ANKGESS

O82248 Nuclear transcription factor Y subunit B-51.9e-2664.37Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE
        LP ANVGR+MK ILP  +K+SKEAK+TMQEC +EFISFVT EA++KCHKE R+T+NGDDI WA  +LG D+YA    KYL ++R  E
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE

P25207 Nuclear transcription factor Y subunit beta5.1e-2457.95Show/hide
Query:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREA
        + LP ANV R+MK  +PQT KI+K+AK+ +QEC +EFISF+TSEA+E+CH+E R+T+NG+DI +A  +LG D+Y E    YL KFREA
Subjt:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREA

Q32KW0 Nuclear transcription factor Y subunit beta5.1e-2457.95Show/hide
Query:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREA
        + LP ANV R+MK  +PQT KI+K+AK+ +QEC +EFISF+TSEA+E+CH+E R+T+NG+DI +A  +LG D+Y E    YL KFREA
Subjt:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREA

Q9FGJ3 Nuclear transcription factor Y subunit B-21.3e-2460.92Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE
        LP ANV R+MKK LP  +KISK+AK+TMQEC +EFISFVT EA++KC KE R+T+NGDD+ WA  +LG ++Y E    YL +FRE E
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B41.5e-3159.69Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS-CNKASRFQ
        LP ANVGRLMK+ILP  +KISKEAKQT+QECATEFISFVT EA+EKCH+ENR+T+NGDDI+WA  +LGLDNYA+A  ++L K+REAER ++  NK S   
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS-CNKASRFQ

Query:  EREDD-----DDDDDDEEFYR-ANKGESS
          E +     D  +   +F R   KG SS
Subjt:  EREDD-----DDDDDDEEFYR-ANKGESS

AT2G38880.2 nuclear factor Y, subunit B12.3e-2456.32Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE
        LP AN+ R+MKK LP   KI K+AK T+QEC +EFISF+TSEA++KC KE R+T+NGDD+ WA  +LG ++Y E    YL ++RE E
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE

AT2G47810.1 nuclear factor Y, subunit B51.3e-2764.37Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE
        LP ANVGR+MK ILP  +K+SKEAK+TMQEC +EFISFVT EA++KCHKE R+T+NGDDI WA  +LG D+YA    KYL ++R  E
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE

AT4G14540.1 nuclear factor Y, subunit B34.7e-2556.04Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS
        LP ANV R+MKK LP  +KISK+AK+T+QEC +EFISF+T EA++KC +E R+T+NGDD+ WA  +LG ++Y E    YL K+RE E  K+
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKS

AT5G47640.1 nuclear factor Y, subunit B29.5e-2660.92Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE
        LP ANV R+MKK LP  +KISK+AK+TMQEC +EFISFVT EA++KC KE R+T+NGDD+ WA  +LG ++Y E    YL +FRE E
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGAAGACAATTGGGAAAGGCTTCAGCTGCCAAGTGCTAATGTTGGTAGACTGATGAAGAAAATACTTCCCCAAACATCCAAGATTTCAAAAGAAGCCAAACA
AACAATGCAAGAATGTGCAACAGAATTCATCAGCTTTGTCACAAGTGAAGCAGCAGAAAAGTGTCACAAAGAGAATCGTAGAACTCTCAATGGAGATGACATTTATTGGG
CTTTTGGTTCTCTTGGCTTAGATAATTATGCAGAGGCTTCCGCCAAGTACTTGCTCAAGTTTAGAGAAGCTGAGAGAATCAAGAGTTGTAACAAAGCCAGTAGATTTCAA
GAACGGGAAGACGACGACGACGACGACGACGACGAGGAATTTTATCGGGCTAACAAGGGTGAAAGTTCTCGAACAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGAAGACAATTGGGAAAGGCTTCAGCTGCCAAGTGCTAATGTTGGTAGACTGATGAAGAAAATACTTCCCCAAACATCCAAGATTTCAAAAGAAGCCAAACA
AACAATGCAAGAATGTGCAACAGAATTCATCAGCTTTGTCACAAGTGAAGCAGCAGAAAAGTGTCACAAAGAGAATCGTAGAACTCTCAATGGAGATGACATTTATTGGG
CTTTTGGTTCTCTTGGCTTAGATAATTATGCAGAGGCTTCCGCCAAGTACTTGCTCAAGTTTAGAGAAGCTGAGAGAATCAAGAGTTGTAACAAAGCCAGTAGATTTCAA
GAACGGGAAGACGACGACGACGACGACGACGACGAGGAATTTTATCGGGCTAACAAGGGTGAAAGTTCTCGAACAAATTAG
Protein sequenceShow/hide protein sequence
MKMEDNWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECATEFISFVTSEAAEKCHKENRRTLNGDDIYWAFGSLGLDNYAEASAKYLLKFREAERIKSCNKASRFQ
EREDDDDDDDDEEFYRANKGESSRTN