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Lag0036265 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036265
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr3:42861033..42862223
RNA-Seq ExpressionLag0036265
SyntenyLag0036265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055376.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-0954.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
KAA0061073.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-0954.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
TYJ99303.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-0954.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
TYK08087.1 disease resistance protein [Cucumis melo var. makuwa]2.2e-0952.73Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWL+KW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
XP_008448087.1 PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo]1.7e-0954.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
TrEMBL top hitse value%identityAlignment
A0A1S3BJT6 uncharacterized protein LOC1034903758.3e-1054.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
A0A5A7UM77 Ty3/gypsy retrotransposon protein8.3e-1054.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
A0A5A7UYM1 Ty3/gypsy retrotransposon protein8.3e-1054.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
A0A5D3BJ50 Ty3/gypsy retrotransposon protein8.3e-1054.55Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWLIKW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
A0A5D3C7Z4 Disease resistance protein1.1e-0952.73Show/hide
Query:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
        +RWN EL  +EWL+KW+GLQE DA+WE+V  + + FP FHL+DKV + P  +  P
Subjt:  MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGGAATGCGGAGCTTCTACAGGATGAATGGTTAATCAAATGGGAAGGATTACAAGAATGTGATGCATCTTGGGAAGCAGTGAGAACCATCAAGGAACCGTTTCC
TCATTTCCACCTTCAGGACAAGGTGCTCTTGACCCCGGGAGACCTTAGCAGCCCAGCAGACACCGTCCTTTTGGACAGACAGATGAAGAATATAGATGATGAAGAGGTGA
CTAGAATGGCTTCAATGTGGGGCTTTGAGCCCGGGAATTGGCCACTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGGAATGCGGAGCTTCTACAGGATGAATGGTTAATCAAATGGGAAGGATTACAAGAATGTGATGCATCTTGGGAAGCAGTGAGAACCATCAAGGAACCGTTTCC
TCATTTCCACCTTCAGGACAAGGTGCTCTTGACCCCGGGAGACCTTAGCAGCCCAGCAGACACCGTCCTTTTGGACAGACAGATGAAGAATATAGATGATGAAGAGGTGA
CTAGAATGGCTTCAATGTGGGGCTTTGAGCCCGGGAATTGGCCACTGACATAA
Protein sequenceShow/hide protein sequence
MRWNAELLQDEWLIKWEGLQECDASWEAVRTIKEPFPHFHLQDKVLLTPGDLSSPADTVLLDRQMKNIDDEEVTRMASMWGFEPGNWPLT