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Lag0036274 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036274
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:43102469..43103242
RNA-Seq ExpressionLag0036274
SyntenyLag0036274
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]2.2e-1735.09Show/hide
Query:  SDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLI
        +DLK ++    +F+++ L+PT+HDST+S ER+ +LYCI+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+   +    DE+             
Subjt:  SDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLI

Query:  GKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQIRENLKTYWTYAKERD
               + RK   S     P       +PS  T  T   P  E L+    L  Q+ E L+T+W Y +ERD
Subjt:  GKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQIRENLKTYWTYAKERD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.8e-1933Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S     T + S L     VW HFLK+RL+PTTH  T+S +R++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKLQQN--NIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAY--RLLDQIRENLKTYWTYAKERDEA
         +     +EE+      ID   + ++ Q       +  +S+  AT  S  +     Q         S + +   +   LL    +  + +W Y+KERD A
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKLQQN--NIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAY--RLLDQIRENLKTYWTYAKERDEA

Query:  IRE
        +++
Subjt:  IRE

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.9e-1737.25Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S   + T + S L     +W HFLK+RL+PTTH   +S ERV+LLY ++ G  IN+G +I  EI AC  +++G LFF SLI ++C+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTSQATPQSGSSMAS
         +     +EE+      ID   + ++ Q+   +   + S+S+ T  S SS  S
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTSQATPQSGSSMAS

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.4e-1835.47Show/hide
Query:  VWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGKL-QQNN
        VW HFLK+RL+PTTH  T+S +R++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+      ID   + ++ Q+  
Subjt:  VWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGKL-QQNN

Query:  IQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYR---LLDQIRENLKTYWTYAKERDEAIRE
         +   + STS+ T  S S                 S+     Y    LL    +  + +W Y+KERD A+++
Subjt:  IQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYR---LLDQIRENLKTYWTYAKERDEAIRE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.0e-1832.34Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S     T + S L     VW HFLK+RL+PTTH   +S +R++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQ--IRENLKTYWTYAKERDEAIR
           +  +++          L   G++    + R  +   +++T Q  SS  + +  +   G     +  A+  RL  Q    +  + +W Y+KERD A++
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQ--IRENLKTYWTYAKERDEAIR

Query:  E
        +
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.3e-1933Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S     T + S L     VW HFLK+RL+PTTH  T+S +R++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKLQQN--NIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAY--RLLDQIRENLKTYWTYAKERDEA
         +     +EE+      ID   + ++ Q       +  +S+  AT  S  +     Q         S + +   +   LL    +  + +W Y+KERD A
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKLQQN--NIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAY--RLLDQIRENLKTYWTYAKERDEA

Query:  IRE
        +++
Subjt:  IRE

A0A2P5BNT0 Uncharacterized protein (Fragment)1.4e-1737.25Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S   + T + S L     +W HFLK+RL+PTTH   +S ERV+LLY ++ G  IN+G +I  EI AC  +++G LFF SLI ++C+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTSQATPQSGSSMAS
         +     +EE+      ID   + ++ Q+   +   + S+S+ T  S SS  S
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKL-QQNNIQRKDKASTSQATPQSGSSMAS

A0A2P5CEY2 Uncharacterized protein2.1e-1835.47Show/hide
Query:  VWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGKL-QQNN
        VW HFLK+RL+PTTH  T+S +R++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+      ID   + ++ Q+  
Subjt:  VWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGKL-QQNN

Query:  IQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYR---LLDQIRENLKTYWTYAKERDEAIRE
         +   + STS+ T  S S                 S+     Y    LL    +  + +W Y+KERD A+++
Subjt:  IQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYR---LLDQIRENLKTYWTYAKERDEAIRE

A0A2P5DXM3 Uncharacterized protein9.6e-1932.34Show/hide
Query:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR
        L+ VA  G EW  S     T + S L     VW HFLK+RL+PTTH   +S +R++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+ 
Subjt:  LKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR

Query:  VKIVSGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQ--IRENLKTYWTYAKERDEAIR
           +  +++          L   G++    + R  +   +++T Q  SS  + +  +   G     +  A+  RL  Q    +  + +W Y+KERD A++
Subjt:  VKIVSGKDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQ--IRENLKTYWTYAKERDEAIR

Query:  E
        +
Subjt:  E

A0A7J6FZ22 Uncharacterized protein1.1e-1735.09Show/hide
Query:  SDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLI
        +DLK ++    +F+++ L+PT+HDST+S ER+ +LYCI+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+   +    DE+             
Subjt:  SDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLI

Query:  GKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQIRENLKTYWTYAKERD
               + RK   S     P       +PS  T  T   P  E L+    L  Q+ E L+T+W Y +ERD
Subjt:  GKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQIRENLKTYWTYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAGCATTAAAACTTGTGGCCAACAAAGGAGTTGAATGGAAAGAGTCTCAGACGAAGATGAAGACTCTAGTGTCAAGCGACTTAAAGCTAGAGTTGGCTGTTTG
GCTTCACTTTCTAAAGAACCGTTTGATGCCAACCACCCACGACAGTACCATCTCAGTAGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGATGGAAATCAATGTAG
GGAGCATAATCAGAGATGAGATCTTAGCCTGTGGAAGGAAAAGGGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATTGTTTCAGGC
AAGGACGAGGAGCGCCATTTCTTTAAGCCGACTATTGACTTGTCCTTGATAGGGAAGCTCCAACAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCTCAGGCTAC
TCCTCAATCAGGGTCGAGCATGGCTTCTCCATCCCAGCACACTCCTTTTACAGGGCCCTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCGCCTGCTTGATCAAATCA
GGGAGAACCTGAAGACATATTGGACCTATGCAAAGGAGAGGGACGAAGCCATTAGAGAGTTTAACCTCTCTATCGCCCAAGTATTGCTCCGGTCTTTTCCAATTTCCCTC
AGTCGCTGTTGCCTCAAGAAGACAAGGATTCTAATGAAGAGGATGATGAAAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGATGAGGACTAGGGGAGTTTT
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAGCATTAAAACTTGTGGCCAACAAAGGAGTTGAATGGAAAGAGTCTCAGACGAAGATGAAGACTCTAGTGTCAAGCGACTTAAAGCTAGAGTTGGCTGTTTG
GCTTCACTTTCTAAAGAACCGTTTGATGCCAACCACCCACGACAGTACCATCTCAGTAGAGAGAGTTATGCTCCTCTACTGTATTATGAAGGGGATGGAAATCAATGTAG
GGAGCATAATCAGAGATGAGATCTTAGCCTGTGGAAGGAAAAGGGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAGAGGGTGAAGATTGTTTCAGGC
AAGGACGAGGAGCGCCATTTCTTTAAGCCGACTATTGACTTGTCCTTGATAGGGAAGCTCCAACAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCTCAGGCTAC
TCCTCAATCAGGGTCGAGCATGGCTTCTCCATCCCAGCACACTCCTTTTACAGGGCCCTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCGCCTGCTTGATCAAATCA
GGGAGAACCTGAAGACATATTGGACCTATGCAAAGGAGAGGGACGAAGCCATTAGAGAGTTTAACCTCTCTATCGCCCAAGTATTGCTCCGGTCTTTTCCAATTTCCCTC
AGTCGCTGTTGCCTCAAGAAGACAAGGATTCTAATGAAGAGGATGATGAAAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGATGAGGACTAGGGGAGTTTT
CTGA
Protein sequenceShow/hide protein sequence
MKEALKLVANKGVEWKESQTKMKTLVSSDLKLELAVWLHFLKNRLMPTTHDSTISVERVMLLYCIMKGMEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVSG
KDEERHFFKPTIDLSLIGKLQQNNIQRKDKASTSQATPQSGSSMASPSQHTPFTGPSPSSEALAIAYRLLDQIRENLKTYWTYAKERDEAIREFNLSIAQVLLRSFPISL
SRCCLKKTRILMKRMMKMMMKMMKRKRVPRMRTRGVF