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Lag0036277 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036277
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvacuolar protein sorting-associated protein 27-like isoform X2
Genome locationchr3:43158068..43159857
RNA-Seq ExpressionLag0036277
SyntenyLag0036277
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process)
GO:0033565 - ESCRT-0 complex (cellular component)
GO:0032266 - phosphatidylinositol-3-phosphate binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055738.1 vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa]7.1e-2987.18Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        NL +ESRINYEAS + LREAIKNGDT AV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIENGASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

XP_016900921.1 PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 27 [Cucumis melo]7.1e-2987.18Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        NL +ESRINYEAS + LREAIKNGDT AV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIENGASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

XP_022929532.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]9.3e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

XP_022929548.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]9.3e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

XP_022929552.1 potassium channel KOR2-like isoform X3 [Cucurbita moschata]9.3e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

TrEMBL top hitse value%identityAlignment
A0A1S4DY61 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 273.5e-2987.18Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        NL +ESRINYEAS + LREAIKNGDT AV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIENGASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

A0A5A7UKZ2 Vacuolar protein sorting-associated protein 273.5e-2987.18Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        NL +ESRINYEAS + LREAIKNGDT AV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIENGASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

A0A6J1EN28 potassium channel KOR2-like isoform X34.5e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

A0A6J1ESF6 vacuolar protein sorting-associated protein 27-like isoform X24.5e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

A0A6J1EUN7 vacuolar protein sorting-associated protein 27-like isoform X14.5e-2985.9Show/hide
Query:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        N  +ESRINYEAS + LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHVA VFNQTDIVFALIE+GASLDYKNAQ
Subjt:  NLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

SwissProt top hitse value%identityAlignment
O14974 Protein phosphatase 1 regulatory subunit 12A2.6e-0544.44Show/hide
Query:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD
        A  +GDT  V KLL  G D NY +  GL+ LH A + +  D+V  L+ENGA+++
Subjt:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD

Q10728 Protein phosphatase 1 regulatory subunit 12A2.6e-0544.44Show/hide
Query:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD
        A  +GDT  V KLL  G D NY +  GL+ LH A + +  D+V  L+ENGA+++
Subjt:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD

Q4I8B6 Palmitoyltransferase AKR11.7e-0434.78Show/hide
Query:  EASDDWLREAIKNGDTHAVRKLLREG-IDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ
        +  +D + +  + GD  A+ KL   G  DA YHD +G++ LH A + NQ  +   LIE+GA ++ K  +
Subjt:  EASDDWLREAIKNGDTHAVRKLLREG-IDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQ

Q90623 Protein phosphatase 1 regulatory subunit 12A4.4e-0542.59Show/hide
Query:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD
        A  +GDT  V +LL  G D NY +  GL+ LH A + +  D+V  L+ENGA+++
Subjt:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD

Q9DBR7 Protein phosphatase 1 regulatory subunit 12A2.6e-0544.44Show/hide
Query:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD
        A  +GDT  V KLL  G D NY +  GL+ LH A + +  D+V  L+ENGA+++
Subjt:  AIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLD

Arabidopsis top hitse value%identityAlignment
AT2G22370.1 unknown protein3.4e-0565.12Show/hide
Query:  LSSF--YLYRLLHLSKPGISTSVVPT--AAAASMLSDGAGTTM
        +SSF  +L  L+HLSKP IST VVPT  AAAAS++SDG GTT+
Subjt:  LSSF--YLYRLLHLSKPGISTSVVPT--AAAASMLSDGAGTTM

AT2G26210.1 Ankyrin repeat family protein4.0e-2246.55Show/hide
Query:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV
        KP    ++ P       + AS  S G+ ++ N        ++  + +YEAS + LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+AV+FNQTDI 
Subjt:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV

Query:  FALIENGASLDYKNAQ
          L+++GASL+YKNAQ
Subjt:  FALIENGASLDYKNAQ

AT2G26210.2 Ankyrin repeat family protein4.0e-2246.55Show/hide
Query:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV
        KP    ++ P       + AS  S G+ ++ N        ++  + +YEAS + LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+AV+FNQTDI 
Subjt:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV

Query:  FALIENGASLDYKNAQ
          L+++GASL+YKNAQ
Subjt:  FALIENGASLDYKNAQ

AT2G26210.3 Ankyrin repeat family protein4.0e-2246.55Show/hide
Query:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV
        KP    ++ P       + AS  S G+ ++ N        ++  + +YEAS + LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+AV+FNQTDI 
Subjt:  KPGISTSVVPTA-----AAASMLSDGAGTTMNL-------VEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIV

Query:  FALIENGASLDYKNAQ
          L+++GASL+YKNAQ
Subjt:  FALIENGASLDYKNAQ

AT5G66055.1 ankyrin repeat protein1.7e-0429.67Show/hide
Query:  TMNLVEESRINYEASDD---WLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQRRNVIELC
        T  L+ ES   +   D+    +  A++      ++ LL    D N  D+ G + LHVAV   ++DIV  L+  GA ++ KN      + LC
Subjt:  TMNLVEESRINYEASDD---WLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAVVFNQTDIVFALIENGASLDYKNAQRRNVIELC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTCTTTGGCTATTGCTTGTACTTTCTAAAGAGTGGCAAAATCAAGCTTTCATCCTTTTACTTGTACAGGTTGTTGCATTTGTCAAAACCGGGAATATCCACTAG
TGTTGTTCCTACTGCTGCTGCAGCATCTATGTTGTCTGATGGTGCAGGAACAACAATGAATCTTGTAGAGGAATCAAGGATTAATTATGAAGCAAGCGACGATTGGTTAA
GGGAAGCAATCAAGAATGGTGACACTCATGCTGTTAGGAAACTTTTGCGTGAGGGTATAGATGCAAATTACCATGACAAGCAAGGACTGTCTTTGCTGCATGTGGCGGTT
GTCTTTAACCAGACCGATATTGTTTTTGCTCTCATTGAAAATGGTGCTAGCCTGGACTACAAAAATGCTCAAAGGAGAAATGTCATTGAATTGTGCTCTGGCTTCTTTGC
AATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTCTTTGGCTATTGCTTGTACTTTCTAAAGAGTGGCAAAATCAAGCTTTCATCCTTTTACTTGTACAGGTTGTTGCATTTGTCAAAACCGGGAATATCCACTAG
TGTTGTTCCTACTGCTGCTGCAGCATCTATGTTGTCTGATGGTGCAGGAACAACAATGAATCTTGTAGAGGAATCAAGGATTAATTATGAAGCAAGCGACGATTGGTTAA
GGGAAGCAATCAAGAATGGTGACACTCATGCTGTTAGGAAACTTTTGCGTGAGGGTATAGATGCAAATTACCATGACAAGCAAGGACTGTCTTTGCTGCATGTGGCGGTT
GTCTTTAACCAGACCGATATTGTTTTTGCTCTCATTGAAAATGGTGCTAGCCTGGACTACAAAAATGCTCAAAGGAGAAATGTCATTGAATTGTGCTCTGGCTTCTTTGC
AATATAA
Protein sequenceShow/hide protein sequence
MSVFGYCLYFLKSGKIKLSSFYLYRLLHLSKPGISTSVVPTAAAASMLSDGAGTTMNLVEESRINYEASDDWLREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVAV
VFNQTDIVFALIENGASLDYKNAQRRNVIELCSGFFAI