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Lag0036279 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036279
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:43200197..43200559
RNA-Seq ExpressionLag0036279
SyntenyLag0036279
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015386823.1 uncharacterized protein LOC107177480 [Citrus sinensis]1.3e-1243.01Show/hide
Query:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTER
        A+ RRKP   LLTVKQ   E+L+DYI +++N+++QV+GYDDG++L  I+ GL   KL  S+ +  P +Y E + +  +Y +AEE  K++  E+
Subjt:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTER

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.3e-1242.61Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLK-SKQTEREVQG
        +G R + KP   LLT+KQ   ESL++Y+ARF+ + LQVEG  D +AL A + G+ +E+L+ S G+  P T++E +++A +Y+SA EL+  S+  ERE   
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLK-SKQTEREVQG

Query:  MSIFYRKREDRSRRR
         S    KRE R  +R
Subjt:  MSIFYRKREDRSRRR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.4e-1141.53Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM
        +G R R +P   LLT+KQ   ESL+DY+ARF+ + LQVEG  D ++L A + G+ +E L  S G+  P+T+ E +++A RY+SA E   SK   RE  G 
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM

Query:  SIFYRKREDRSRRRRANE
             KR D  R R  ++
Subjt:  SIFYRKREDRSRRRRANE

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]2.4e-1444.25Show/hide
Query:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGMSI
        AR R KP   LLTVKQ   E+L+DYI R++N++ QV+GYDDG+AL+ I+ GL   KL  S+ +  P +Y E + +A +Y +AEE  K++  E+   G S 
Subjt:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGMSI

Query:  FYRKREDRSRRRR
          +K++D  R RR
Subjt:  FYRKREDRSRRRR

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]4.9e-1243.52Show/hide
Query:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGMSI
        AR R KP   LLTVKQ   ESL++YI R++ +  QV+GYDDG+AL+ ++ GL   +L  S+ ++ P TY E +++A +Y +AEE  +SK+  RE    S 
Subjt:  ARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGMSI

Query:  FYRKREDR
          + +EDR
Subjt:  FYRKREDR

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183072.2e-1038.14Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM
        +G R R +P   LLT+KQ   ESL DY+ARF+ + LQVEG  + ++L A +  + +E L  S G+  P T+ E +++A +Y+SA E   SK   RE +G 
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM

Query:  SIFYRKREDRSRRRRANE
             K+ D++R R  ++
Subjt:  SIFYRKREDRSRRRRANE

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-1141.53Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM
        +G R R +P   LLT+KQ   ESL+DY+ARF+ + LQVEG  D ++L A + G+ +E L  S G+  P+T+ E +++A RY+SA E   SK   RE  G 
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM

Query:  SIFYRKREDRSRRRRANE
             KR D  R R  ++
Subjt:  SIFYRKREDRSRRRRANE

A0A6J1DYL6 uncharacterized protein LOC1110257851.3e-1039.83Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM
        +G R R +P   LLT+KQ   ESL DY+ARF+ + LQ+E   D ++L A + G+ +E L  S G+  P T+ E +++A RY+SA E   SK   RE  G 
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM

Query:  SIFYRKREDRSRRRRANE
             KR D+ R R  ++
Subjt:  SIFYRKREDRSRRRRANE

A0A6J1DZ49 uncharacterized protein LOC1110248516.3e-1342.61Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLK-SKQTEREVQG
        +G R + KP   LLT+KQ   ESL++Y+ARF+ + LQVEG  D +AL A + G+ +E+L+ S G+  P T++E +++A +Y+SA EL+  S+  ERE   
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLK-SKQTEREVQG

Query:  MSIFYRKREDRSRRR
         S    KRE R  +R
Subjt:  MSIFYRKREDRSRRR

A0A6J1E1E7 uncharacterized protein LOC1110255481.7e-1039.83Show/hide
Query:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM
        +G R R +P   LLT+KQ   ESL DY+ARF+ + LQ+EG  D ++L A + G+ +E L  S  +  P T+ E +++A RY+SA E   SK   RE  G 
Subjt:  MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGM

Query:  SIFYRKREDRSRRRRANE
             KR D+ R R  ++
Subjt:  SIFYRKREDRSRRRRANE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCGGGATCGACGTAAGCCGCAGATCAACCTACTGACAGTCAAGCAAGGACCAAAAGAAAGCTTGCAAGATTATATAGCAAGATTCAGTAACAAGGTTTTGCA
GGTAGAAGGGTATGATGATGGACTTGCACTGACTGCTATCATTTTAGGTCTGCATGAAGAAAAGTTGCTCAGTTCAATCGGAGAGAGTCAACCGCACACCTATGTGGAAT
TCATGACTCAGGCACATAGATATATAAGCGCTGAGGAACTGTTGAAATCAAAGCAGACAGAGAGGGAAGTCCAAGGAATGTCTATTTTTTATCGAAAGAGGGAAGATAGA
AGCAGGAGACGCCGAGCTAACGAAGGGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTCGGGATCGACGTAAGCCGCAGATCAACCTACTGACAGTCAAGCAAGGACCAAAAGAAAGCTTGCAAGATTATATAGCAAGATTCAGTAACAAGGTTTTGCA
GGTAGAAGGGTATGATGATGGACTTGCACTGACTGCTATCATTTTAGGTCTGCATGAAGAAAAGTTGCTCAGTTCAATCGGAGAGAGTCAACCGCACACCTATGTGGAAT
TCATGACTCAGGCACATAGATATATAAGCGCTGAGGAACTGTTGAAATCAAAGCAGACAGAGAGGGAAGTCCAAGGAATGTCTATTTTTTATCGAAAGAGGGAAGATAGA
AGCAGGAGACGCCGAGCTAACGAAGGGAGCTAA
Protein sequenceShow/hide protein sequence
MGARDRRKPQINLLTVKQGPKESLQDYIARFSNKVLQVEGYDDGLALTAIILGLHEEKLLSSIGESQPHTYVEFMTQAHRYISAEELLKSKQTEREVQGMSIFYRKREDR
SRRRRANEGS