; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036280 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036280
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L18
Genome locationchr3:43210772..43211116
RNA-Seq ExpressionLag0036280
SyntenyLag0036280
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590442.1 hypothetical protein SDJN03_15865, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5197.37Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

XP_022961444.1 uncharacterized protein LOC111462025 [Cucurbita moschata]8.7e-5197.37Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

XP_022968817.1 uncharacterized protein LOC111467940 [Cucurbita maxima]1.9e-5096.49Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETATVASAASSQEK LRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

XP_022970166.1 uncharacterized protein LOC111469142 [Cucurbita maxima]9.6e-5093.86Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETAT+ASAASSQEKALR SMESTRDVAAA KIGKLLGERLLLKGIPAVCVHLKREQKYHGK+K
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AV+DSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

XP_023515963.1 uncharacterized protein LOC111779971 [Cucurbita pepo subsp. pepo]2.5e-5095.61Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPY+L+MHFTNKYVSAQVIHS+TATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

TrEMBL top hitse value%identityAlignment
A0A5D3DYC1 50S ribosomal protein L181.0e-4993.86Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPP++PPRL QYLKPYVL+MHFTNK+VSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AV+DSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

A0A6J1CWR7 uncharacterized protein LOC1110152861.0e-4994.74Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRP R+TQYLKPYVL+MHFTNKYVSAQV+HSETATVASAASSQEKALR+SMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

A0A6J1HE21 uncharacterized protein LOC1114620254.2e-5197.37Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

A0A6J1HZV8 uncharacterized protein LOC1114691424.7e-5093.86Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETAT+ASAASSQEKALR SMESTRDVAAA KIGKLLGERLLLKGIPAVCVHLKREQKYHGK+K
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AV+DSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

A0A6J1I0R8 uncharacterized protein LOC1114679409.4e-5196.49Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPPPVRPPRLTQYLKPYVL+MHFTNKYVSAQVIHSETATVASAASSQEK LRSSMESTRDVAAAAKIGKLLGERL+LKGIPAVCVHLKREQKYHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AVVDSVREAG+KLL
Subjt:  AVVDSVREAGVKLL

SwissProt top hitse value%identityAlignment
A7MWH4 50S ribosomal protein L181.7e-0944.57Show/hide
Query:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK
        L +H T ++V AQVI +  + V +AAS+ EKA+R  ++ T +V AA  +GK + ER L KG+ AV       Q YHG+V A+ +S REAG+K
Subjt:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK

A8IAP8 50S ribosomal protein L185.9e-1044.57Show/hide
Query:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK
        L +H T+K++ AQ+I         AASS EK LRSS+++  DV AA  IGKL+ ER   KG+ AV V  +    YHG+VKA+ +  RE G++
Subjt:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK

B6EPU1 50S ribosomal protein L181.7e-0945.65Show/hide
Query:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK
        L +H T ++  AQVI    + V +AAS+ EKA+R  + +T + AAA  IGKL+ ER + KGI  V       Q YHG+V A+ DS REAG+K
Subjt:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK

B7VLE1 50S ribosomal protein L181.3e-0943.48Show/hide
Query:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK
        L +H T ++V AQVI +  + V +AAS+ EKA+R  +++T +V AA  +GK + ER L KG+ +V       Q YHG+V A+ +S REAG+K
Subjt:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK

P52863 50S ribosomal protein L187.8e-1044.57Show/hide
Query:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK
        L +H T ++V AQVI S  + V +AAS+ EKA+R  +++T +V AA  +GK + ER L KG+  V       Q YHG+V A+ +S REAG+K
Subjt:  LRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVK

Arabidopsis top hitse value%identityAlignment
AT3G20230.1 Ribosomal L18p/L5e family protein6.1e-1030.69Show/hide
Query:  RLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAG
        R   Y++P++L + F+ K++ A+V+H  T+ V S A++  + +R+++ S  D  A   IGKL+ ER +   + AV    ++ ++  GK+  V+D+++E G
Subjt:  RLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAG

Query:  V
        +
Subjt:  V

AT3G22450.1 Ribosomal L18p/L5e family protein5.9e-0531.25Show/hide
Query:  PYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVKL
        P+ L ++ + + V A VIH  T+ V + A S  K ++  + S R+VAA A +G +L +R L   I  V    ++  K  GK++ V+ ++ + GV +
Subjt:  PYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAGVKL

AT3G45020.1 Ribosomal L18p/L5e family protein7.0e-0632.43Show/hide
Query:  LKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTR--DVAAAAKIGKLLGERLLLKGIP-----AVCVHLKREQKYHG-----KVKAVV
        LK YVLR+  + KY++A V+      + + AS+ E  +++S+E  R  +  AAA +G++L  RL ++G+       +   +K+E +  G     KV AV+
Subjt:  LKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTR--DVAAAAKIGKLLGERLLLKGIP-----AVCVHLKREQKYHG-----KVKAVV

Query:  DSVREAGVKLL
        +S+R  GV L+
Subjt:  DSVREAGVKLL

AT5G27820.1 Ribosomal L18p/L5e family protein1.4e-4378.95Show/hide
Query:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK
        MVIPP VRPPRL  YLKPYVL+MHFTNK+V AQVIHS TATVA +ASSQEKALR +M+ TRDVAAA+KIGK+LGERLL+K IPAV + +K+EQ+YHGKVK
Subjt:  MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVK

Query:  AVVDSVREAGVKLL
        AV+DSVREAGVKLL
Subjt:  AVVDSVREAGVKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATTCCTCCTCCAGTTAGGCCACCAAGATTAACCCAGTATCTAAAGCCATATGTCTTGAGGATGCACTTCACAAACAAGTATGTGAGCGCCCAGGTGATCCACTC
CGAAACGGCCACCGTTGCTTCGGCTGCAAGCTCGCAAGAGAAGGCATTGCGGTCGAGCATGGAGTCAACGAGGGATGTGGCTGCTGCTGCAAAGATTGGGAAATTGTTGG
GGGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAATATCATGGTAAGGTCAAAGCTGTTGTTGATTCTGTTAGGGAAGCAGGT
GTTAAGCTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATTCCTCCTCCAGTTAGGCCACCAAGATTAACCCAGTATCTAAAGCCATATGTCTTGAGGATGCACTTCACAAACAAGTATGTGAGCGCCCAGGTGATCCACTC
CGAAACGGCCACCGTTGCTTCGGCTGCAAGCTCGCAAGAGAAGGCATTGCGGTCGAGCATGGAGTCAACGAGGGATGTGGCTGCTGCTGCAAAGATTGGGAAATTGTTGG
GGGAGAGGCTTTTGCTTAAGGGAATCCCAGCTGTTTGTGTGCACTTGAAAAGAGAACAGAAATATCATGGTAAGGTCAAAGCTGTTGTTGATTCTGTTAGGGAAGCAGGT
GTTAAGCTGCTTTGA
Protein sequenceShow/hide protein sequence
MVIPPPVRPPRLTQYLKPYVLRMHFTNKYVSAQVIHSETATVASAASSQEKALRSSMESTRDVAAAAKIGKLLGERLLLKGIPAVCVHLKREQKYHGKVKAVVDSVREAG
VKLL