; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036309 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036309
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:43790835..43793109
RNA-Seq ExpressionLag0036309
SyntenyLag0036309
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR026960 - Reverse transcriptase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]4.4e-13637.07Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        R ++N + G+ D+N  WQT++  I + F +YF   FSSS   Q  M+ +L+ V+  IT  MN +LL  ++RE                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +  CL ILN E SV+E+NHT I LIPK +                           RLK VL+ +I E+QSAF+  R I DN++   E +N 
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-
        +   +KG+    ALKLDM+KAYDRVEW +L  +M KLGF +TW+S VM C+++ TFS+L  G   G I P RG+RQG PLSPYLFL+C+EG S LL  A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R   L G+ +AR  P ++HL FADDS++F+KA  K+      + + YE+ +GQ +N SK                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 S  GKE+LIK+++QAIPTY+M CFRIPKG+  ++  + A+FWW    +KR +HW  WE LCK K  GGL FRDL 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFNQA+LA Q WR+L  P   ++++   +Y P+   L A V    SF W+   WG +LL  G+   +G+  SI +++D WLP PS FK++SP  P L   
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF
        T V +  T S  W+VP L       +V+ I +IP++  A  D  IWHYE  GMY+VKSGY+L  L+  + S    + V+  +++WKK+W + +P+K+K F
Subjt:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW
        +W+   + +P    L    +  + ICP CH   E+  HA++ C  A+E+W
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]7.8e-13336.9Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        R ++N + G+ D+N  WQT++  I + F +YF   FSSS   Q  M+ +L+ V+  IT  MN RLL  ++RE                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +  CL ILN E SV+E+NHT I LIPK +                           RLK VL  +I E+QSAF+  R I DN++   E +N 
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-
        +   +K +    ALKLDM+KAYDRVEW +L  +M KLGF +TW+S VM C+++ TFS+L  G   G I P RG+RQG PLSPYLFL+C+EG S LL  A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R   L G+ +AR  P ++HL FADDS++F+KA  K       + + YE+ +GQ +N SK                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 S  GKE+LIK+++QAIPTY+M CF+IPKG+  ++  + A+FWW    +KR +HW  WE LCK K  GGL FRDL 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFNQA+LA Q WR+L  P   ++++   +Y P+   L A V    SF W    WG +LL  G+   +G+  SI +++D WLP PS FK++SP  P L   
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF
        T V +  T S  W+VP L       +V+ I +IP++  A  D  IWHYE  GMY+VKSGY+L  L+  + S    + V+  +++WKK+W + +P+K+K F
Subjt:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRARE
        +W+   + +P    L    +  + ICP CH   E+  HA++ C  A+E
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRARE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.9e-13541.25Show/hide
Query:  SITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQ
        +I +  D++ +++ +  +IT E+N++LL+PY++E                                   T  +CLN LN+   +K+WN T I LIPK +Q
Subjt:  SITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQ

Query:  A-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLG
                                  RLK V+  +I ++QSAF+  R+I+DN+I+GHECL+ +   + G +G AALKLD+SKA+DRVEW+YL  IM K+G
Subjt:  A-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLG

Query:  FHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFG
        F+  WI  +++C+++  FSI LNG   G  +PSRGIRQGDPLSPYLFLLC+EGLSAL+     S  L GI    +   I+HL FADDSLIF+++   E  
Subjt:  FHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFG

Query:  HFRNILKEYEKASGQSVNLSKSMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVL-CAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFN
          R +L  Y +ASGQ +N SKS     +L    V       + C    K +      L     +    GE RK+HW  W  +C PKE GGLNFRDL  FN
Subjt:  HFRNILKEYEKASGQSVNLSKSMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVL-CAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFN

Query:  QAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVA
        QA++A   WR L +PNL +SKVL  KYF  +S+L AS  + SS+FWKGF+WG DLL  G+   +G   +I  FSDPWLPRP+TFK +  F+    D TVA
Subjt:  QAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVA

Query:  EFITPSIHWDVPKLNHFLIGVDVEMITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVM-LKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFH
         FIT   +WDV  ++H     D ++I  +PIS  +  D+W+WHY+ RG Y+V+SGYKL M LK   TS S   R  + W  +WK+ VP+K+K F+W+  H
Subjt:  EFITPSIHWDVPKLNHFLIGVDVEMITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVM-LKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFH

Query:  NSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVE
          IPT  NL    +     C +C +  E+  HA F C RAR+IW  ++P +  +  E
Subjt:  NSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVE

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]7.8e-13337.07Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        RR+QN I G+ D  G W  ++ +I +A  +YF   +SSS   Q  ++ V   +  K+T+EMN+ L+  +++E                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +   LN+LN    + E N TNI LIPK+                            RLK +L  II E+QSAF S R ITDN+++  E +++
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSA
        L  K  GK G+ A+KLDMSKA+DRVEW ++ K+M ++GF + W  LVM+C+TS ++SIL+NG + G I PSRG+RQGDPLSP LFLLC+EGLSAL+  +A
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSA

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R+K + GISI R CPK++HLFFADDS++F KAA +E    R+IL +YE+ASGQ +N  K                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 SMGGKE+LIK++ QAIPTY M CF +P+G+ D +  +   FWWG   ++ KM W SW+ +C  K  GGL FR+L 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFN AMLA QAWR+L NPN  + +VL  +YFPT  +LNA + +  S+ W+     L+++R G    +G  + I I+ D WLP PST+KVISP   N +  
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  TVAEFITPSIH-WDVPKLNHFLIGVDVEMITKIPIS-GSASDTWIWHYEGRGMYTVKSGYKL---VMLKHQETSLSDVERQNRWWKKVWKMNVPSKVKNF
         V+  I P    W V  L    +  +VE I +IP+S     D  IW    +G ++VKS Y +   ++  ++    S+ +     WKK+W +N+P K+K F
Subjt:  TVAEFITPSIH-WDVPKLNHFLIGVDVEMITKIPIS-GSASDTWIWHYEGRGMYTVKSGYKL---VMLKHQETSLSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW
         W+   + +PT  N+    +  S  CP+C    E  +HAL  C  A  +W
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]6.0e-13338.39Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRETTS-------------------------
        R+R+N + G+E+  GIW  ++  I+E   ++F E F++S      +   L  +  K+T EMN +L  P++ E                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRETTS-------------------------

Query:  ---------SSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                 S+CLN+LN + +    NHT I LIPK                             R+K +L++II   QSAFI  R ITDN+I+G+ECL+ 
Subjt:  ---------SSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR
        +   +  K G  ALKLD+SKAYDRVEW +L + M K+GF S  ++L+M+CVTS +FS+L+NG   G I+P RG+RQG PLSPYLF+LC+E LS LLV A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR

Query:  SKSL-AGISIARSCPKISHLFFADDSLIFIKAAAKEFG-----HFR---------NILKEYEKASGQSVNLSK-------------------------SM
           L  G+  AR    I+HL FADDSLIF +A+  E       H R         N++ ++EK  G    + +                         S 
Subjt:  SKSL-AGISIARSCPKISHLFFADDSLIFIKAAAKEFG-----HFR---------NILKEYEKASGQSVNLSK-------------------------SM

Query:  GGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLC
        GGKEVLIK+  QAIP YAM  F++P+G  D I    AKFWWGS G+KR +HW+ WE L + K  GGL FR+   FNQA++A QAWR+L  PN  +S+VL 
Subjt:  GGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLC

Query:  GKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFITPSIHWDVPKLNHFLIGVDVE
         +YF  SS L A   A +S+ W+  +WG  +++ G+   +G  + IAIFSD WLPRP TF+ I P    +  + VA+ I     WD  KL    + VD  
Subjt:  GKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFITPSIHWDVPKLNHFLIGVDVE

Query:  MITKIPI-SGSASDTWIWHYEGRGMYTVKSGYKLVMLKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLCHE
         I KIP+ +  A D  +WHY+ RG Y+VKSGY+L +      S S  E  +++W  +W + +P K+K F+W+  +N +P+  NL    V     C  C  
Subjt:  MITKIPI-SGSASDTWIWHYEGRGMYTVKSGYKLVMLKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLCHE

Query:  DMETTDHALFQCSRAREIW
         +ET  HAL +C  AR+IW
Subjt:  DMETTDHALFQCSRAREIW

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein2.1e-13637.07Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        R ++N + G+ D+N  WQT++  I + F +YF   FSSS   Q  M+ +L+ V+  IT  MN +LL  ++RE                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +  CL ILN E SV+E+NHT I LIPK +                           RLK VL+ +I E+QSAF+  R I DN++   E +N 
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-
        +   +KG+    ALKLDM+KAYDRVEW +L  +M KLGF +TW+S VM C+++ TFS+L  G   G I P RG+RQG PLSPYLFL+C+EG S LL  A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R   L G+ +AR  P ++HL FADDS++F+KA  K+      + + YE+ +GQ +N SK                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 S  GKE+LIK+++QAIPTY+M CFRIPKG+  ++  + A+FWW    +KR +HW  WE LCK K  GGL FRDL 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFNQA+LA Q WR+L  P   ++++   +Y P+   L A V    SF W+   WG +LL  G+   +G+  SI +++D WLP PS FK++SP  P L   
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF
        T V +  T S  W+VP L       +V+ I +IP++  A  D  IWHYE  GMY+VKSGY+L  L+  + S    + V+  +++WKK+W + +P+K+K F
Subjt:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW
        +W+   + +P    L    +  + ICP CH   E+  HA++ C  A+E+W
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW

A0A2N9FBQ4 Reverse transcriptase domain-containing protein2.2e-13337.03Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSR-----------------------------
        R+R+N +  ++D NG+W T +  + + F NY++  F++S  +   +D V+ ++   +T  MN  L+S ++                              
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSR-----------------------------

Query:  -----ETTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
             E   ++ L  LNS   +K  NHT + LIPK +                           RLK +L +I+ ESQSAF+ GR ITDN+++  E L++
Subjt:  -----ETTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR
        +  ++ GK G  ALKLDMSKAYDRVEW YL  +M ++GFH+ WIS++M+C+++ ++SIL+NGE  G+I+P+RG+RQGDPLSPYLFLLC+EGL +L+  A+
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR

Query:  -SKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSM--------------------------------------G
         +  L G+SI+R  PKI+HLFFADDSL+F KA   +    + IL EYE+ASGQ +N  K+                                        
Subjt:  -SKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSM--------------------------------------G

Query:  GKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCG
         KE+LIKS+ QAIPTYAM CFR+PK ++ +I VL  +FWWG  G++ KMHW SW+ LCK K  GGL FR L  FN+A+LA Q WR+L N      KV   
Subjt:  GKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCG

Query:  KYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFITP-SIHWDVPKLNHFLIGVDVE
        KYFP  S+L AS  +  S+ WK  +   +L+  G    +G+  +I I+   WLP     +VISP  P+     V   +   S  W+   +    +  + +
Subjt:  KYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFITP-SIHWDVPKLNHFLIGVDVE

Query:  MITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVMLKHQ--ETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLC
        +I KIP+S  S  DT IW     G Y V+SGY L++ +    E   S+       W  +W + VP KV++F+W+  H S+PT  NL   H+    +C  C
Subjt:  MITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVMLKHQ--ETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLC

Query:  HEDMETTDHALFQCSRAREIW
        + + ET  H L+ CS ++ +W
Subjt:  HEDMETTDHALFQCSRAREIW

A0A6J1DX30 uncharacterized protein LOC1110248741.4e-13541.25Show/hide
Query:  SITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQ
        +I +  D++ +++ +  +IT E+N++LL+PY++E                                   T  +CLN LN+   +K+WN T I LIPK +Q
Subjt:  SITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQ

Query:  A-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLG
                                  RLK V+  +I ++QSAF+  R+I+DN+I+GHECL+ +   + G +G AALKLD+SKA+DRVEW+YL  IM K+G
Subjt:  A-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLG

Query:  FHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFG
        F+  WI  +++C+++  FSI LNG   G  +PSRGIRQGDPLSPYLFLLC+EGLSAL+     S  L GI    +   I+HL FADDSLIF+++   E  
Subjt:  FHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFG

Query:  HFRNILKEYEKASGQSVNLSKSMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVL-CAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFN
          R +L  Y +ASGQ +N SKS     +L    V       + C    K +      L     +    GE RK+HW  W  +C PKE GGLNFRDL  FN
Subjt:  HFRNILKEYEKASGQSVNLSKSMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVL-CAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFN

Query:  QAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVA
        QA++A   WR L +PNL +SKVL  KYF  +S+L AS  + SS+FWKGF+WG DLL  G+   +G   +I  FSDPWLPRP+TFK +  F+    D TVA
Subjt:  QAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVA

Query:  EFITPSIHWDVPKLNHFLIGVDVEMITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVM-LKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFH
         FIT   +WDV  ++H     D ++I  +PIS  +  D+W+WHY+ RG Y+V+SGYKL M LK   TS S   R  + W  +WK+ VP+K+K F+W+  H
Subjt:  EFITPSIHWDVPKLNHFLIGVDVEMITKIPISG-SASDTWIWHYEGRGMYTVKSGYKLVM-LKHQETSLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFH

Query:  NSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVE
          IPT  NL    +     C +C +  E+  HA F C RAR+IW  ++P +  +  E
Subjt:  NSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVE

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)2.1e-13637.07Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        R ++N + G+ D+N  WQT++  I + F +YF   FSSS   Q  M+ +L+ V+  IT  MN +LL  ++RE                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +  CL ILN E SV+E+NHT I LIPK +                           RLK VL+ +I E+QSAF+  R I DN++   E +N 
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-
        +   +KG+    ALKLDM+KAYDRVEW +L  +M KLGF +TW+S VM C+++ TFS+L  G   G I P RG+RQG PLSPYLFL+C+EG S LL  A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R   L G+ +AR  P ++HL FADDS++F+KA  K+      + + YE+ +GQ +N SK                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 S  GKE+LIK+++QAIPTY+M CFRIPKG+  ++  + A+FWW    +KR +HW  WE LCK K  GGL FRDL 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFNQA+LA Q WR+L  P   ++++   +Y P+   L A V    SF W+   WG +LL  G+   +G+  SI +++D WLP PS FK++SP  P L   
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF
        T V +  T S  W+VP L       +V+ I +IP++  A  D  IWHYE  GMY+VKSGY+L  L+  + S    + V+  +++WKK+W + +P+K+K F
Subjt:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW
        +W+   + +P    L    +  + ICP CH   E+  HA++ C  A+E+W
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIW

M5WJW2 Reverse transcriptase domain-containing protein3.8e-13336.9Show/hide
Query:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------
        R ++N + G+ D+N  WQT++  I + F +YF   FSSS   Q  M+ +L+ V+  IT  MN RLL  ++RE                            
Subjt:  RRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRE----------------------------

Query:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF
                +  CL ILN E SV+E+NHT I LIPK +                           RLK VL  +I E+QSAF+  R I DN++   E +N 
Subjt:  ------TTSSSCLNILNSEASVKEWNHTNIVLIPKSRQA-------------------------RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNF

Query:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-
        +   +K +    ALKLDM+KAYDRVEW +L  +M KLGF +TW+S VM C+++ TFS+L  G   G I P RG+RQG PLSPYLFL+C+EG S LL  A 
Subjt:  LYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-

Query:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------
        R   L G+ +AR  P ++HL FADDS++F+KA  K       + + YE+ +GQ +N SK                                         
Subjt:  RSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSK-----------------------------------------

Query:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV
                                 S  GKE+LIK+++QAIPTY+M CF+IPKG+  ++  + A+FWW    +KR +HW  WE LCK K  GGL FRDL 
Subjt:  -------------------------SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLV

Query:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM
        AFNQA+LA Q WR+L  P   ++++   +Y P+   L A V    SF W    WG +LL  G+   +G+  SI +++D WLP PS FK++SP  P L   
Subjt:  AFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDM

Query:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF
        T V +  T S  W+VP L       +V+ I +IP++  A  D  IWHYE  GMY+VKSGY+L  L+  + S    + V+  +++WKK+W + +P+K+K F
Subjt:  T-VAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQETS---LSDVERQNRWWKKVWKMNVPSKVKNF

Query:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRARE
        +W+   + +P    L    +  + ICP CH   E+  HA++ C  A+E
Subjt:  VWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRARE

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.6e-3225.75Show/hide
Query:  SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKV
        S  G+  L K+++ ++P ++M    +P+ IL+++  L   F WGS  EK+K H   W  +C PK+ GGL  R   + N+A+++   WR+L   N   + V
Subjt:  SMGGKEVLIKSIVQAIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKV

Query:  LCGKYFPTSSVLNASVTAFSSF--FWKGFVWGL-DLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFI-TPSIHWDVPKLNHFL
        L  KY       +  +    S+   W+    GL D++  G+    G  Q I  ++D W+      ++ +   P   D  VA+ +  P   WD  K++ + 
Subjt:  LCGKYFPTSSVLNASVTAFSSF--FWKGFVWGL-DLLRCGISKNLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFI-TPSIHWDVPKLNHFL

Query:  IG---VDVEMITKIPISGSASDTWIWHYEGRGMYTVKSGYKLVMLKHQETSLSDVERQN--RWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVP
             +++  +    ++G A D   W +   G ++V+S Y+++       ++ +V R N   ++  +WK+ VP +VK F+W   + ++ T       H+ 
Subjt:  IG---VDVEMITKIPISGSASDTWIWHYEGRGMYTVKSGYKLVMLKHQETSLSDVERQN--RWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVP

Query:  VSGICPLCHEDMETTDHALFQCSRAREIWTLIYP
         S +C +C   +E+  H L  C     IW  + P
Subjt:  VSGICPLCHEDMETTDHALFQCSRAREIWTLIYP

P11369 LINE-1 retrotransposable element ORF2 protein9.0e-1528.06Show/hide
Query:  RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGES
        R++  +  II   Q  FI G     N+      ++++  K K K  +  + LD  KA+D+++  ++ K++ + G    +++++    + P  +I +NGE 
Subjt:  RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGES

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSM
           I    G RQG PLSPYLF +  E L+  +   + K + GI I +   KIS L  ADD +++I           N++  + +  G  +N +KSM
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSM

P14381 Transposon TX1 uncharacterized 149 kDa protein7.6e-1429.07Show/hide
Query:  VKEWN-----HTNIVLIPKSRQARLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHS
        +K W       T+  ++ K+   RLK VL E+I   QS  + GR+I DN+ L  + L+F    R+  +  A L LD  KA+DRV+  YL   +    F  
Subjt:  VKEWN-----HTNIVLIPKSRQARLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHS

Query:  TWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRN
         ++  +     S    + +N      +   RG+RQG PLS  L+ L  E    LL     K L G+ +     ++    +ADD +I +     +    + 
Subjt:  TWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRN

Query:  ILKEYEKASGQSVNLSKSMGGKEVLIK
          + Y  AS   +N SKS G  E  +K
Subjt:  ILKEYEKASGQSVNLSKSMGGKEVLIK

P92555 Uncharacterized mitochondrial protein AtMg012508.4e-1352.94Show/hide
Query:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKS-LAGISIARSCPKISHLFFADDS
        ++NG   G + PSRG+RQGDPLSPYLF+LC+E LS L   A+ +  L GI ++ + P+I+HL FADD+
Subjt:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKS-LAGISIARSCPKISHLFFADDS

P93295 Uncharacterized mitochondrial protein AtMg003102.4e-2840.56Show/hide
Query:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKE-IGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLN
        A+P YAM CFR+ K +  K+     +FWW S   KRK+ W +W+ LCK KE  GGL FRDL  FNQA+LA Q++R++  P+  +S++L  +YFP SS++ 
Subjt:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKE-IGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLN

Query:  ASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL
         SV    S+ W+  + G +LL  G+ + +G      ++ D W+
Subjt:  ASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein3.3e-2028.22Show/hide
Query:  KYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAI----FSDPWLPRPSTFKVISPFDPNLKDMTVAEFITPS---IHWDVPKLNHFL
        +YF   S+L+A V    S+ W   + G+ LL+ G    +G  Q+I I      D   PRP         +   K+MT+            WD  K++ F+
Subjt:  KYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAI----FSDPWLPRPSTFKVISPFDPNLKDMTVAEFITPS---IHWDVPKLNHFL

Query:  IGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQET----SLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVP
           D   I +I ++ S   D  IW+Y   G YTV+SGY L  L H  +    +++          ++W + +  K+K+F+W+    ++ T   L T  + 
Subjt:  IGVDVEMITKIPISGSAS-DTWIWHYEGRGMYTVKSGYKLVMLKHQET----SLSDVERQNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVP

Query:  VSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV
        +   CP CH + E+ +HALF C  A   W L    ++R Q+
Subjt:  VSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQV

AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.1e-1138.75Show/hide
Query:  RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWI
        RLK ++  +I  +Q++FI GR  TDN++   E ++ + +++KG  G+  LKLD+ KAYDR+ W YL   +   GF   W+
Subjt:  RLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWI

AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-4531.38Show/hide
Query:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNA
        A+PTY M CF +PK +  +I  + A FWW +  E + MHW++W++L   K  GG+ F+D+ AFN A+L  Q WR+L+ P   ++KV   +YF  S  LNA
Subjt:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNA

Query:  SVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL-PRPSTFKVISPFDPNLKDMTVAEFITPS-------IHWDVPKLNHFLIGVDVEMITK
         + +  SF WK      ++LR G    +G  + I I+   WL  +P++  +     P  +  +V+  +  S         W    +      V+ ++I +
Subjt:  SVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL-PRPSTFKVISPFDPNLKDMTVAEFITPS-------IHWDVPKLNHFLIGVDVEMITK

Query:  I-PISGSASDTWIWHYEGRGMYTVKSGY-KLVMLKHQETSLSDVERQ--NRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLCHED
        + P      D++ W Y   G YTVKSGY  L  + ++ +S  +V     N  ++K+WK     K+++F+WK   NS+P    L   H+     C  C   
Subjt:  I-PISGSASDTWIWHYEGRGMYTVKSGY-KLVMLKHQETSLSDVERQ--NRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLCHED

Query:  METTDHALFQCSRAREIWTLIYPPM
         ET +H LF+C+ AR  W +   P+
Subjt:  METTDHALFQCSRAREIWTLIYPPM

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-2940.56Show/hide
Query:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKE-IGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLN
        A+P YAM CFR+ K +  K+     +FWW S   KRK+ W +W+ LCK KE  GGL FRDL  FNQA+LA Q++R++  P+  +S++L  +YFP SS++ 
Subjt:  AIPTYAMGCFRIPKGILDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKE-IGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLN

Query:  ASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL
         SV    S+ W+  + G +LL  G+ + +G      ++ D W+
Subjt:  ASVTAFSSFFWKGFVWGLDLLRCGISKNLGTRQSIAIFSDPWL

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)6.0e-1452.94Show/hide
Query:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKS-LAGISIARSCPKISHLFFADDS
        ++NG   G + PSRG+RQGDPLSPYLF+LC+E LS L   A+ +  L GI ++ + P+I+HL FADD+
Subjt:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARSKS-LAGISIARSCPKISHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGACGTCAAAATTGGATAAAGGGGGTTGAGGATTCCAATGGGATTTGGCAAACAGACAAGGCAAATATTCAAGAAGCTTTTAACAACTACTTCACGGAAACTTT
CTCCTCATCCATTACGGATCAAAGAGATATGGATGGTGTTCTTAGTCATGTTCAACGGAAAATCACTGATGAGATGAATCAGCGATTATTAAGTCCTTATTCTCGAGAAA
CAACTAGTTCCAGCTGCTTGAATATTTTAAACTCGGAGGCATCGGTGAAGGAGTGGAATCATACAAATATTGTCTTAATTCCAAAGAGTCGTCAGGCGAGACTTAAACTT
GTTCTTAATGAGATTATCGATGAAAGCCAATCTGCTTTTATATCTGGTAGATCAATAACTGACAATATGATCCTGGGGCATGAATGTTTGAATTTTCTCTATAAGAAGCG
TAAAGGGAAGGTGGGATACGCTGCTCTTAAATTAGATATGAGCAAGGCATACGATAGGGTAGAGTGGTCATACTTGCACAAAATTATGGGGAAACTGGGATTCCATTCTA
CTTGGATTTCTTTGGTTATGAAGTGTGTGACCTCTCCAACATTCTCAATTCTTTTGAATGGTGAGTCCTTTGGGTTTATCAAACCTTCACGTGGGATTCGACAAGGGGAT
CCTTTATCTCCTTATCTATTCTTACTTTGTTCTGAGGGCCTATCTGCACTATTGGTATCAGCTAGATCAAAATCTTTGGCTGGTATATCCATAGCTAGATCTTGTCCGAA
AATCTCTCATCTCTTCTTTGCGGATGACAGTCTGATTTTTATAAAAGCAGCAGCCAAGGAGTTCGGGCATTTTAGAAATATTTTGAAAGAATATGAAAAGGCATCTGGCC
AATCGGTTAACCTTTCGAAATCTATGGGTGGAAAAGAGGTTTTGATAAAGAGCATAGTTCAGGCCATCCCAACATATGCCATGGGATGCTTCAGAATTCCGAAGGGGATC
CTAGACAAAATTGCAGTTCTGTGTGCTAAGTTCTGGTGGGGATCGAATGGAGAAAAGCGTAAGATGCATTGGCAAAGCTGGGAGAATCTGTGCAAGCCTAAAGAGATAGG
TGGTCTTAATTTTCGAGATTTGGTGGCTTTTAACCAAGCAATGTTGGCAATGCAGGCTTGGAGAGTTTTAACTAATCCAAACCTTACGATCTCGAAAGTCTTATGTGGAA
AATATTTTCCTACATCCTCAGTGTTAAATGCGTCTGTTACAGCTTTTTCGTCGTTCTTTTGGAAGGGTTTTGTTTGGGGTTTGGATTTATTGAGATGTGGCATAAGCAAA
AATCTAGGGACTAGGCAATCTATTGCTATTTTTAGTGATCCATGGCTTCCTCGCCCTTCTACCTTTAAGGTCATTTCACCGTTTGATCCAAATCTGAAGGATATGACTGT
AGCTGAATTTATAACGCCGTCCATTCATTGGGATGTCCCAAAACTTAATCATTTTCTGATCGGGGTAGATGTGGAGATGATTACAAAAATTCCGATCAGTGGATCGGCTT
CAGATACATGGATCTGGCATTATGAGGGTCGAGGGATGTATACTGTTAAAAGTGGGTATAAGTTAGTGATGCTGAAGCACCAGGAGACATCTTTGTCAGACGTCGAGAGA
CAAAACAGATGGTGGAAGAAGGTCTGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAAATTTTTTCATAACTCCATTCCAACAATGGTCAATCTAAGGAC
TCACCATGTTCCAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCCTGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTT
ATCCGCCGATGATGCGAATTCAAGTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGACGTCAAAATTGGATAAAGGGGGTTGAGGATTCCAATGGGATTTGGCAAACAGACAAGGCAAATATTCAAGAAGCTTTTAACAACTACTTCACGGAAACTTT
CTCCTCATCCATTACGGATCAAAGAGATATGGATGGTGTTCTTAGTCATGTTCAACGGAAAATCACTGATGAGATGAATCAGCGATTATTAAGTCCTTATTCTCGAGAAA
CAACTAGTTCCAGCTGCTTGAATATTTTAAACTCGGAGGCATCGGTGAAGGAGTGGAATCATACAAATATTGTCTTAATTCCAAAGAGTCGTCAGGCGAGACTTAAACTT
GTTCTTAATGAGATTATCGATGAAAGCCAATCTGCTTTTATATCTGGTAGATCAATAACTGACAATATGATCCTGGGGCATGAATGTTTGAATTTTCTCTATAAGAAGCG
TAAAGGGAAGGTGGGATACGCTGCTCTTAAATTAGATATGAGCAAGGCATACGATAGGGTAGAGTGGTCATACTTGCACAAAATTATGGGGAAACTGGGATTCCATTCTA
CTTGGATTTCTTTGGTTATGAAGTGTGTGACCTCTCCAACATTCTCAATTCTTTTGAATGGTGAGTCCTTTGGGTTTATCAAACCTTCACGTGGGATTCGACAAGGGGAT
CCTTTATCTCCTTATCTATTCTTACTTTGTTCTGAGGGCCTATCTGCACTATTGGTATCAGCTAGATCAAAATCTTTGGCTGGTATATCCATAGCTAGATCTTGTCCGAA
AATCTCTCATCTCTTCTTTGCGGATGACAGTCTGATTTTTATAAAAGCAGCAGCCAAGGAGTTCGGGCATTTTAGAAATATTTTGAAAGAATATGAAAAGGCATCTGGCC
AATCGGTTAACCTTTCGAAATCTATGGGTGGAAAAGAGGTTTTGATAAAGAGCATAGTTCAGGCCATCCCAACATATGCCATGGGATGCTTCAGAATTCCGAAGGGGATC
CTAGACAAAATTGCAGTTCTGTGTGCTAAGTTCTGGTGGGGATCGAATGGAGAAAAGCGTAAGATGCATTGGCAAAGCTGGGAGAATCTGTGCAAGCCTAAAGAGATAGG
TGGTCTTAATTTTCGAGATTTGGTGGCTTTTAACCAAGCAATGTTGGCAATGCAGGCTTGGAGAGTTTTAACTAATCCAAACCTTACGATCTCGAAAGTCTTATGTGGAA
AATATTTTCCTACATCCTCAGTGTTAAATGCGTCTGTTACAGCTTTTTCGTCGTTCTTTTGGAAGGGTTTTGTTTGGGGTTTGGATTTATTGAGATGTGGCATAAGCAAA
AATCTAGGGACTAGGCAATCTATTGCTATTTTTAGTGATCCATGGCTTCCTCGCCCTTCTACCTTTAAGGTCATTTCACCGTTTGATCCAAATCTGAAGGATATGACTGT
AGCTGAATTTATAACGCCGTCCATTCATTGGGATGTCCCAAAACTTAATCATTTTCTGATCGGGGTAGATGTGGAGATGATTACAAAAATTCCGATCAGTGGATCGGCTT
CAGATACATGGATCTGGCATTATGAGGGTCGAGGGATGTATACTGTTAAAAGTGGGTATAAGTTAGTGATGCTGAAGCACCAGGAGACATCTTTGTCAGACGTCGAGAGA
CAAAACAGATGGTGGAAGAAGGTCTGGAAGATGAACGTGCCATCCAAAGTAAAAAATTTTGTGTGGAAATTTTTTCATAACTCCATTCCAACAATGGTCAATCTAAGGAC
TCACCATGTTCCAGTAAGTGGGATTTGTCCACTTTGTCATGAAGATATGGAAACAACGGATCATGCCCTGTTTCAGTGTTCTCGGGCTCGCGAGATATGGACTTTGATTT
ATCCGCCGATGATGCGAATTCAAGTGGAGTAG
Protein sequenceShow/hide protein sequence
MRRRQNWIKGVEDSNGIWQTDKANIQEAFNNYFTETFSSSITDQRDMDGVLSHVQRKITDEMNQRLLSPYSRETTSSSCLNILNSEASVKEWNHTNIVLIPKSRQARLKL
VLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGD
PLSPYLFLLCSEGLSALLVSARSKSLAGISIARSCPKISHLFFADDSLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMGGKEVLIKSIVQAIPTYAMGCFRIPKGI
LDKIAVLCAKFWWGSNGEKRKMHWQSWENLCKPKEIGGLNFRDLVAFNQAMLAMQAWRVLTNPNLTISKVLCGKYFPTSSVLNASVTAFSSFFWKGFVWGLDLLRCGISK
NLGTRQSIAIFSDPWLPRPSTFKVISPFDPNLKDMTVAEFITPSIHWDVPKLNHFLIGVDVEMITKIPISGSASDTWIWHYEGRGMYTVKSGYKLVMLKHQETSLSDVER
QNRWWKKVWKMNVPSKVKNFVWKFFHNSIPTMVNLRTHHVPVSGICPLCHEDMETTDHALFQCSRAREIWTLIYPPMMRIQVE