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Lag0036314 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036314
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:43858928..43859321
RNA-Seq ExpressionLag0036314
SyntenyLag0036314
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48232.1 hypothetical protein EZV62_027526 [Acer yangbiense]2.2e-0540Show/hide
Query:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        N R A  + +   E +DI  ES   WG+ +R+K+QID+L PLKR + LK     K   + + YE+LS++C
Subjt:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

TXG53376.1 hypothetical protein EZV62_022545 [Acer yangbiense]9.7e-0641.43Show/hide
Query:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        N R A  + K   E V+I  ES   WGK + +K++ID+L PLKR + LK G   +   + + YEKL D+C
Subjt:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

XP_021713609.1 uncharacterized protein LOC110681792 [Chenopodium quinoa]2.2e-0548.08Show/hide
Query:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        DESDP  W +S+RIK+ +D+  PL+RG+FL +  +   +WI V YE+L+D+C
Subjt:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

XP_021747454.1 uncharacterized protein LOC110713303 [Chenopodium quinoa]1.3e-0542.25Show/hide
Query:  RNLREAYAVTKWTSEKVDIKDESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDY
        R+L   Y V ++    ++  DESDP  W  SLRIKI +D+  PL+RG+FL  G K + +W+ + YE+L+D+
Subjt:  RNLREAYAVTKWTSEKVDIKDESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDY

XP_021749920.1 uncharacterized protein LOC110715641 [Chenopodium quinoa]8.8e-0750Show/hide
Query:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        D++DP  WG+ +RIK+ ++V  PL+RG+FL +G  GK KW+ + YE+LSD+C
Subjt:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

TrEMBL top hitse value%identityAlignment
A0A5C7HB59 Uncharacterized protein4.7e-0641.43Show/hide
Query:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        N R A  + K   E V+I  ES   WGK + +K++ID+L PLKR + LK G   +   + + YEKL D+C
Subjt:  NLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

A0A803LAB8 Uncharacterized protein4.7e-0648.08Show/hide
Query:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        D+SDP  WG+ LRIK+ ID+  PL+RG+FL +G     KW+ + YE+L ++C
Subjt:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

A0A803MIX6 Uncharacterized protein7.2e-0738.03Show/hide
Query:  RNLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        RN+   Y V ++ S  ++  D+    W + +R+KI +D+  PL+RG+FL +GS    KW+ + YE+LSD+C
Subjt:  RNLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

A0A803MNY5 Uncharacterized protein3.6e-0648.08Show/hide
Query:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC
        D+SDP  W + LRIKI +DV  PL++G+F+ +G + + KWI + YE+L+D+C
Subjt:  DESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYC

A0A803MP90 Uncharacterized protein6.1e-0642.25Show/hide
Query:  RNLREAYAVTKWTSEKVDIKDESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDY
        R+L   Y V ++    ++  DESDP  W  SLRIKI +D+  PL+RG+FL  G K + +W+ + YE+L+D+
Subjt:  RNLREAYAVTKWTSEKVDIKDESDPT-WGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGTATCAAAGGATGGGTGTTGGACATGGGACCTTGGTTTTATGACAAAGTGCTATTATTGTTCGAGGAACCTAAGGGAGGCATATGCAGTGACGAAATGGACTTC
AGAAAAAGTGGACATCAAGGATGAATCGGACCCGACATGGGGGAAGTCTCTAAGGATTAAAATTCAAATTGATGTTCTTAATCCATTGAAGAGGGGAATATTCTTGAAAT
CAGGCAGTAAAGGGAAGGATAAATGGATCCCAGTAACATACGAGAAGTTGTCAGATTACTGTTCGGATGTGGTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGTATCAAAGGATGGGTGTTGGACATGGGACCTTGGTTTTATGACAAAGTGCTATTATTGTTCGAGGAACCTAAGGGAGGCATATGCAGTGACGAAATGGACTTC
AGAAAAAGTGGACATCAAGGATGAATCGGACCCGACATGGGGGAAGTCTCTAAGGATTAAAATTCAAATTGATGTTCTTAATCCATTGAAGAGGGGAATATTCTTGAAAT
CAGGCAGTAAAGGGAAGGATAAATGGATCCCAGTAACATACGAGAAGTTGTCAGATTACTGTTCGGATGTGGTTGTTTAG
Protein sequenceShow/hide protein sequence
MLVSKDGCWTWDLGFMTKCYYCSRNLREAYAVTKWTSEKVDIKDESDPTWGKSLRIKIQIDVLNPLKRGIFLKSGSKGKDKWIPVTYEKLSDYCSDVVV