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Lag0036316 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036316
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:43861243..43861551
RNA-Seq ExpressionLag0036316
SyntenyLag0036316
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7030928.1 unnamed protein product [Microthlaspi erraticum]1.2e-1447.31Show/hide
Query:  NRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIFY
        NR+  L + NG+W EK + +E+ A  YFQ+LF SS PQ  + ++ L+  PK +T E N  LT   + EEIH+ IK M+P KAP+PDGI ++FY
Subjt:  NRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIFY

XP_010686122.1 PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris]3.9e-1846.53Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K S  KK NR++GLF  +G W E+++E+E +   YF+E+F SS P   A++E+L+   K +T E N  L   +++EEIH  +K MHP KAP PDG+ AIF
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        Y
Subjt:  Y

XP_012844095.1 PREDICTED: uncharacterized protein LOC105964130 [Erythranthe guttata]1.1e-1543.56Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K S+ +KVN + GL    GVW EKD +ME +   YF+++F SS P  D + E+L++    +  E N +LT ++T EEI+R ++ MHP K+P+PDG   IF
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        Y
Subjt:  Y

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]1.5e-1443.56Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K S+ ++ N + G+   NG W +  + + +VA +YFQ ++ SS+P    I E+L A P  +TEE N  L   FTREEI   +  MHPTKAP PDG+ AIF
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        +
Subjt:  Y

XP_024195622.1 uncharacterized protein LOC112198734 [Rosa chinensis]8.1e-1640.59Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K +N K+ N + GL+  NGVW + DK ME++  +YF ++F SS   M+A+   L+A   C++ E N++L  N+T EEI   +  M+PTK+P PDG+  +F
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        +
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A2N9GM07 Reverse transcriptase domain-containing protein8.2e-1437.25Show/hide
Query:  MKTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAI
        +K S  ++ N ++GLF   GVW+    +++     YF+++F +SMP    ++E ++A    +T   N +L  NFT EE+H+ ++ MHPTKAP PDG+ A+
Subjt:  MKTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAI

Query:  FY
        F+
Subjt:  FY

A0A2P6SAP1 Putative RNA-directed DNA polymerase6.3e-1439.6Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        + SN +K NR++GL   NG W   D E+E +  NY++ LF SS P    ++++    P  +TEE N  L  + T +E+++ +K MHP KAP PDG    F
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        Y
Subjt:  Y

A0A6D2IL03 Reverse transcriptase domain-containing protein5.7e-1547.31Show/hide
Query:  NRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIFY
        NR+  L + NG+W EK + +E+ A  YFQ+LF SS PQ  + ++ L+  PK +T E N  LT   + EEIH+ IK M+P KAP+PDGI ++FY
Subjt:  NRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIFY

A0A803QGA2 Uncharacterized protein2.4e-1337.62Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K +  +K N +RGLF  + +W   ++ + ++  +Y+  LF S MP  ++IEE+L+A  + +T++ N  LT  FT EE+ R + SM   K+P PDG+ A+F
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        Y
Subjt:  Y

F4NCJ4 Reverse transcriptase domain-containing protein6.3e-1441.58Show/hide
Query:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF
        K S  KK N + G+F   G W  + +E+E V   YFQE+F SS P  +  +E+L+   + +T+E N  L   +++EEI   +  MHP KAP PDG+ AIF
Subjt:  KTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIF

Query:  Y
        Y
Subjt:  Y

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACAAGCAATATAAAGAAGGTGAATAGAGTTCGGGGTCTCTTTAAGGTGAATGGGGTTTGGTTGGAGAAGGATAAGGAAATGGAGGAAGTAGCTAATAACTATTT
CCAAGAGCTCTTCCAATCCTCTATGCCACAGATGGACGCTATTGAAGAAATTTTGAAGGCAACCCCTAAGTGTCTAACGGAGGAGCAAAATGTGAAGCTTACTTCCAATT
TTACGAGGGAGGAGATTCATAGAGTTATAAAAAGCATGCACCCTACCAAAGCCCCAAACCCGGATGGAATTCAAGCCATTTTCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACAAGCAATATAAAGAAGGTGAATAGAGTTCGGGGTCTCTTTAAGGTGAATGGGGTTTGGTTGGAGAAGGATAAGGAAATGGAGGAAGTAGCTAATAACTATTT
CCAAGAGCTCTTCCAATCCTCTATGCCACAGATGGACGCTATTGAAGAAATTTTGAAGGCAACCCCTAAGTGTCTAACGGAGGAGCAAAATGTGAAGCTTACTTCCAATT
TTACGAGGGAGGAGATTCATAGAGTTATAAAAAGCATGCACCCTACCAAAGCCCCAAACCCGGATGGAATTCAAGCCATTTTCTATTAG
Protein sequenceShow/hide protein sequence
MKTSNIKKVNRVRGLFKVNGVWLEKDKEMEEVANNYFQELFQSSMPQMDAIEEILKATPKCLTEEQNVKLTSNFTREEIHRVIKSMHPTKAPNPDGIQAIFY