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Lag0036334 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036334
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:44478001..44478606
RNA-Seq ExpressionLag0036334
SyntenyLag0036334
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]6.3e-4449.17Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +   S+ +EF E EA  + H HNDALV+ L I NA+V+RIL+DGGS  D+ S TA+ AM LG + L+ S TPL+GF GE++ P+  IELP+TF  
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTTPR
          +S+T++++FLVVD   +YN IL RPT+H L+A+ STY Q +KFPT  GVG + GE+++SRECY+ +++  ++K  TT R
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTTPR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.1e-4351.72Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +++    +EFLE E   I H HNDALV+ L I NA+V+ IL+DGGS  D++S TA+  M LG   L+ S  PLVGF GE V P+  IELPVTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDE
        G +S+TK+++FLVVD   + NAILGRPT+H LKA+ S Y Q +KFPT  G+G + GE+++SRECY+ ++K  D+
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDE

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.8e-4453.18Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +    +++EF E EA  + H HNDALV+ L I N +V+RIL+DGGS AD++S TA+ AM LG   L+ S  PLVGF GE+V  +  IELPVTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD
        G +SVTK+++FLVV+   +YNAILGRPT+H LKA+ STY Q  KFPT  GVG + GE+++SRECY  ++++ D
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]5.3e-4351.45Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +   S+++EF E EA  + H HNDALV+ L I N +V+RIL+DGGS AD++S T +  M LG   L+ S  PL+GF  E+V P+  IEL VTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD
        G +SVTK+++FLVVD   +YNAILGR T+H LKA+ STY Q +KFPT  GVG + GE+++SRECY+ +++  D
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD

XP_023903529.1 uncharacterized protein LOC112015361 [Quercus suber]4.5e-4253.61Show/hide
Query:  SLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGEGQQSVTKLINF
        ++ F +++A R+HH H+DA+VV L I + +  R+LID GS AD+L  +AF  M+LGRD LRP+ +PLVGF G KV P  S+ LPVT G   Q VTK +NF
Subjt:  SLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGEGQQSVTKLINF

Query:  LVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQ
        LVVDC  +YNAI+GRPTL+  KA+ STY   +KFPTE G G VHG++  +RECY +A+   DE+ Q
Subjt:  LVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQ

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159013.0e-4449.17Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +   S+ +EF E EA  + H HNDALV+ L I NA+V+RIL+DGGS  D+ S TA+ AM LG + L+ S TPL+GF GE++ P+  IELP+TF  
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTTPR
          +S+T++++FLVVD   +YN IL RPT+H L+A+ STY Q +KFPT  GVG + GE+++SRECY+ +++  ++K  TT R
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTTPR

A0A6J1DAK4 uncharacterized protein LOC1110189025.2e-4451.72Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +++    +EFLE E   I H HNDALV+ L I NA+V+ IL+DGGS  D++S TA+  M LG   L+ S  PLVGF GE V P+  IELPVTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDE
        G +S+TK+++FLVVD   + NAILGRPT+H LKA+ S Y Q +KFPT  G+G + GE+++SRECY+ ++K  D+
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDE

A0A6J1DQY2 uncharacterized protein LOC1110223211.4e-4453.18Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +    +++EF E EA  + H HNDALV+ L I N +V+RIL+DGGS AD++S TA+ AM LG   L+ S  PLVGF GE+V  +  IELPVTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD
        G +SVTK+++FLVV+   +YNAILGRPT+H LKA+ STY Q  KFPT  GVG + GE+++SRECY  ++++ D
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD

A0A6J1DV51 uncharacterized protein LOC1110246623.7e-4250.9Show/hide
Query:  LEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGEGQQSVTKLINFL
        ++F E E  R+ H HNDALV+ L I N +V+RIL+DGGS   ++S TA+ AM LG   L+ +  PLVGF GE+V  +  I+LPVTFG G +++TK++ FL
Subjt:  LEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGEGQQSVTKLINFL

Query:  VVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTT
        VVD   +YNAILGRPT+H LKA+ STY + LKFPT+ G+  V GE+++S ECY+ +L+  D  T+ +
Subjt:  VVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTT

A0A6J1DXV4 uncharacterized protein LOC1110251472.6e-4351.45Show/hide
Query:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE
        +Y   +   S+++EF E EA  + H HNDALV+ L I N +V+RIL+DGGS AD++S T +  M LG   L+ S  PL+GF  E+V P+  IEL VTFG 
Subjt:  MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGE

Query:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD
        G +SVTK+++FLVVD   +YNAILGR T+H LKA+ STY Q +KFPT  GVG + GE+++SRECY+ +++  D
Subjt:  GQQSVTKLINFLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCTCTCCTACTTGACCAAAATTCATTGAGTTTGGAGTTTTTAGAGAAAGAAGCGGCAAGAATACACCATTCGCACAATGATGCGCTGGTAGTGGCCCTAACAAT
CGATAATGCCAGAGTTTACCGAATCTTAATTGACGGAGGGAGTTTCGCTGATGTCCTCTCCACTACCGCGTTTGATGCCATGAAACTAGGAAGGGATCGACTAAGGCCGA
GCTTCACACCATTAGTGGGGTTCGATGGAGAAAAAGTGAGTCCACAGAGGAGCATCGAGCTACCAGTGACCTTTGGGGAAGGACAACAGTCAGTCACAAAGTTAATCAAC
TTTCTGGTGGTGGACTGTGTCCTAGCGTACAATGCCATCCTAGGACGACCAACCTTGCATGGGCTCAAAGCAGTGGCCTCAACTTACCGCCAGATCTTGAAATTTCCAAC
AGAAGAAGGTGTGGGAATGGTGCATGGTGAGAAGAAAATGTCAAGAGAATGTTATTTCATGGCACTAAAAAATGTTGACGAGAAAACCCAAACAACACCCCGCACGGGAA
ATAGTCGAGGCCTAGCATTTGTGGGACTAGACCAACCCCTTCCTATGAAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCTCTCCTACTTGACCAAAATTCATTGAGTTTGGAGTTTTTAGAGAAAGAAGCGGCAAGAATACACCATTCGCACAATGATGCGCTGGTAGTGGCCCTAACAAT
CGATAATGCCAGAGTTTACCGAATCTTAATTGACGGAGGGAGTTTCGCTGATGTCCTCTCCACTACCGCGTTTGATGCCATGAAACTAGGAAGGGATCGACTAAGGCCGA
GCTTCACACCATTAGTGGGGTTCGATGGAGAAAAAGTGAGTCCACAGAGGAGCATCGAGCTACCAGTGACCTTTGGGGAAGGACAACAGTCAGTCACAAAGTTAATCAAC
TTTCTGGTGGTGGACTGTGTCCTAGCGTACAATGCCATCCTAGGACGACCAACCTTGCATGGGCTCAAAGCAGTGGCCTCAACTTACCGCCAGATCTTGAAATTTCCAAC
AGAAGAAGGTGTGGGAATGGTGCATGGTGAGAAGAAAATGTCAAGAGAATGTTATTTCATGGCACTAAAAAATGTTGACGAGAAAACCCAAACAACACCCCGCACGGGAA
ATAGTCGAGGCCTAGCATTTGTGGGACTAGACCAACCCCTTCCTATGAAATATTAA
Protein sequenceShow/hide protein sequence
MYSLLLDQNSLSLEFLEKEAARIHHSHNDALVVALTIDNARVYRILIDGGSFADVLSTTAFDAMKLGRDRLRPSFTPLVGFDGEKVSPQRSIELPVTFGEGQQSVTKLIN
FLVVDCVLAYNAILGRPTLHGLKAVASTYRQILKFPTEEGVGMVHGEKKMSRECYFMALKNVDEKTQTTPRTGNSRGLAFVGLDQPLPMKY