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Lag0036335 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036335
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:44478961..44480179
RNA-Seq ExpressionLag0036335
SyntenyLag0036335
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.8e-0434.35Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQE--------ERENQGILVSDRRSEERGRRCQTDESSRSRHEHSS
        QVEG  D V+L   I G++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E        +RE  G      R E+R R CQ D           
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQE--------ERENQGILVSDRRSEERGRRCQTDESSRSRHEHSS

Query:  GRGRTETKELWGQGEPKAKFERYTPLSALLE
                       P  KFE+YT  +  LE
Subjt:  GRGRTETKELWGQGEPKAKFERYTPLSALLE

XP_022150104.1 uncharacterized protein LOC111018365 [Momordica charantia]2.8e-0539.02Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK
        QVEG  D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E  E +    +D++ E  G     D+  RSR E    R R+  K
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK

Query:  ELWGQGEPKAKFERYTPLSALLE
              +P  KFE+YTP +  LE
Subjt:  ELWGQGEPKAKFERYTPLSALLE

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.0e-0438.26Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLK-SKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTET
        QVEG  D VAL   +SG++DERL+ S  +  P T+ME ++RAQ+Y+SA EL+  S+  ERE         R  E+  R   + S        SG GR   
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLK-SKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTET

Query:  KELWGQGEPKAKFER
             Q +P+ KFE+
Subjt:  KELWGQGEPKAKFER

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-0434.15Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK
        QVEG  D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E    +    +D + E  G + Q                R E +
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK

Query:  ELWGQGEPKAKFERYTPLSALLE
        +   Q +P  KFE+YTP +  +E
Subjt:  ELWGQGEPKAKFERYTPLSALLE

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]2.3e-0432.06Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGR----GR
        QV+GYDDGVAL+ ++ GLQ  RL  S+ ++ P TY E ++RA++Y +AEE  +SK              +  E+G   +  ++   R +   GR     R
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGR----GR

Query:  TETKELWGQ-------GEPKAKFERYTPLSA
         +    W Q         P  +F  YT L+A
Subjt:  TETKELWGQ-------GEPKAKFERYTPLSA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128058.7e-0534.35Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQE--------ERENQGILVSDRRSEERGRRCQTDESSRSRHEHSS
        QVEG  D V+L   I G++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E        +RE  G      R E+R R CQ D           
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQE--------ERENQGILVSDRRSEERGRRCQTDESSRSRHEHSS

Query:  GRGRTETKELWGQGEPKAKFERYTPLSALLE
                       P  KFE+YT  +  LE
Subjt:  GRGRTETKELWGQGEPKAKFERYTPLSALLE

A0A6J1D911 uncharacterized protein LOC1110183651.3e-0539.02Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK
        QVEG  D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E  E +    +D++ E  G     D+  RSR E    R R+  K
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK

Query:  ELWGQGEPKAKFERYTPLSALLE
              +P  KFE+YTP +  LE
Subjt:  ELWGQGEPKAKFERYTPLSALLE

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-0434.15Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK
        QVEG  D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E    +    +D + E  G + Q                R E +
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK

Query:  ELWGQGEPKAKFERYTPLSALLE
        +   Q +P  KFE+YTP +  +E
Subjt:  ELWGQGEPKAKFERYTPLSALLE

A0A6J1DYL6 uncharacterized protein LOC1110257854.3e-0433.33Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK
        Q+E   D V+L   +SG++DE L  S  +  P T+ E ++RAQRY+SA E   SK+E    +    +D++ E  G + Q                R E +
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETK

Query:  ELWGQGEPKAKFERYTPLSALLE
        +   Q +P  KFE+YTP +  LE
Subjt:  ELWGQGEPKAKFERYTPLSALLE

A0A6J1DZ49 uncharacterized protein LOC1110248515.1e-0538.26Show/hide
Query:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLK-SKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTET
        QVEG  D VAL   +SG++DERL+ S  +  P T+ME ++RAQ+Y+SA EL+  S+  ERE         R  E+  R   + S        SG GR   
Subjt:  QVEGYDDGVALTTIISGLQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLK-SKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTET

Query:  KELWGQGEPKAKFER
             Q +P+ KFE+
Subjt:  KELWGQGEPKAKFER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTTTTGATTGATTCAATAAATGGTTTTGGCAGCACAAGCCTGAATAACGAGCTGGAAAATATGGATGCTGACATGGAAAGTGGAGCTGATGTGGTGTTGAT
ACACCACGTGCTTGGAGATAGCAGATCAGCTCATTTACACCAAGAAGTCCACCTAGACAAAGTGACGCAAGCTGTCGTCATTCTTCCTGGTATTCAGTGGACTACTCTGT
TCTTCAGCTCGAGGGGATTGAAAACAAGCTCGAGAGAAGCTTCGTTTTGCTGGGTGTTCCAGGTTGAAGGCTATGATGATGGAGTTGCGCTAACTACTATAATTTCAGGT
TTGCAGGATGAAAGGTTACTTAACTCAATCGATGAAAGCCAACCGCGAACATATATGGAATTCATGACCCGAGCACAGAGATATATAAGTGCTGAGGAGCTGCTGAAATC
CAAACAGGAGGAGAGAGAAAACCAGGGAATCCTAGTTTCCGACCGGCGCAGCGAGGAAAGAGGAAGAAGGTGTCAGACAGATGAGAGTAGCCGAAGCCGACATGAACACT
CCTCGGGCCGAGGCCGAACAGAGACAAAAGAGCTGTGGGGCCAGGGAGAACCAAAGGCAAAGTTTGAAAGGTATACTCCACTATCTGCTCTTCTTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTTTTGATTGATTCAATAAATGGTTTTGGCAGCACAAGCCTGAATAACGAGCTGGAAAATATGGATGCTGACATGGAAAGTGGAGCTGATGTGGTGTTGAT
ACACCACGTGCTTGGAGATAGCAGATCAGCTCATTTACACCAAGAAGTCCACCTAGACAAAGTGACGCAAGCTGTCGTCATTCTTCCTGGTATTCAGTGGACTACTCTGT
TCTTCAGCTCGAGGGGATTGAAAACAAGCTCGAGAGAAGCTTCGTTTTGCTGGGTGTTCCAGGTTGAAGGCTATGATGATGGAGTTGCGCTAACTACTATAATTTCAGGT
TTGCAGGATGAAAGGTTACTTAACTCAATCGATGAAAGCCAACCGCGAACATATATGGAATTCATGACCCGAGCACAGAGATATATAAGTGCTGAGGAGCTGCTGAAATC
CAAACAGGAGGAGAGAGAAAACCAGGGAATCCTAGTTTCCGACCGGCGCAGCGAGGAAAGAGGAAGAAGGTGTCAGACAGATGAGAGTAGCCGAAGCCGACATGAACACT
CCTCGGGCCGAGGCCGAACAGAGACAAAAGAGCTGTGGGGCCAGGGAGAACCAAAGGCAAAGTTTGAAAGGTATACTCCACTATCTGCTCTTCTTGAATAG
Protein sequenceShow/hide protein sequence
MEDFLIDSINGFGSTSLNNELENMDADMESGADVVLIHHVLGDSRSAHLHQEVHLDKVTQAVVILPGIQWTTLFFSSRGLKTSSREASFCWVFQVEGYDDGVALTTIISG
LQDERLLNSIDESQPRTYMEFMTRAQRYISAEELLKSKQEERENQGILVSDRRSEERGRRCQTDESSRSRHEHSSGRGRTETKELWGQGEPKAKFERYTPLSALLE