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Lag0036351 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036351
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncorneodesmosin
Genome locationchr3:44894436..44895974
RNA-Seq ExpressionLag0036351
SyntenyLag0036351
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7910183.1 hypothetical protein EAE99_011375 [Botrytis elliptica]1.0e-0428.66Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL---------GI
        PG S+S +++PG   TL G ++ G+    P     L  SV  +PG+ T   G  +   G +  L  SV  +P   T   G      G +         G 
Subjt:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL---------GI

Query:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS
        +  L  SV  +PG  T   G +   PG+ ++L  S+ ++PG  T   G     PGS+
Subjt:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS

XP_030053253.1 corneodesmosin [Microcaecilia unicolor]7.8e-0532.07Show/hide
Query:  GSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGL---SSSVVVIPGGAYTLL----GKSLGRPRNFPGLSSSVVVIP-GVRTLFWGKAWRGLGIS
        G   GF  S +S  +S SSQ    S G S G  + FPG    SS VV I GG+        G S  +   + G SS V+ +P G  ++ +G +    G  
Subjt:  GSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGL---SSSVVVIPGGAYTLL----GKSLGRPRNFPGLSSSVVVIP-GVRTLFWGKAWRGLGIS

Query:  QGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS
           SS V+ +P   ++ +G + G  G     SS V+ +PG  ++ +G S G  G   S SS ++ + G      G S G  GSS
Subjt:  QGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS

XP_038776240.1 uncharacterized protein EAF01_001084 [Botrytis porri]1.0e-0425Show/hide
Query:  YQTQSSPIPCLMVGLSLGMRTSTFPAWLE---------KFEGSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGLSSSVVVIPGGAYTL-----L
        Y T S P   +   LS  + T T P                GSL    +   +L  + S      S   SL      PG S+S++ +PG   TL      
Subjt:  YQTQSSPIPCLMVGLSLGMRTSTFPAWLE---------KFEGSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGLSSSVVVIPGGAYTL-----L

Query:  GKSLGRPRNFPGLSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSS
        G++L  P +   L  S+  +PG  T   G  +   G +  L  SV ++P                     +SV  +PG  TL  G ++  PG  ++LS S
Subjt:  GKSLGRPRNFPGLSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSS

Query:  IVVIPGVRTLFWGKSLGRPGSSRASLQASSSSQGCV
        +  +PG  T+  G +   PG +     ++++  G V
Subjt:  IVVIPGVRTLFWGKSLGRPGSSRASLQASSSSQGCV

XP_038803923.1 uncharacterized protein EAE98_012086 [Botrytis deweyae]1.3e-0429.3Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIP-EVRTL-----------FWGKAWGGLGI
        PG S+S +++PG   TL G ++ G+    P     L  SV  +PG+ T   G  +   G +  L  SV  +P  V TL             G+     G 
Subjt:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIP-EVRTL-----------FWGKAWGGLGI

Query:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS
        +  L  SV  +PG  T   G +   PG+ ++L  S+ ++PG  T   G     PGS+
Subjt:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS

XP_038841628.1 elastin-like, partial [Salvelinus namaycush]1.7e-0430.61Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSLGRPRNFPGLSSSVVVIP-GVRTLFWG---KAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPG
        PG+S  ++ +  G   L G  L        LS  ++ +  G+  L WG    +W  L +S G+ +   + P V  L+ G  WG LG   G      + PG
Subjt:  PGLSSSVVVIPGGAYTLLGKSLGRPRNFPGLSSSVVVIP-GVRTLFWG---KAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPG

Query:  VRTLFWGKSLGRPGKFLSLSSSIVVI----PGVRTLFWGKSLGRPGS
        V    WG  L   G  L+LS  I+ +    PGV  L+ G     PGS
Subjt:  VRTLFWGKSLGRPGKFLSLSSSIVVI----PGVRTLFWGKSLGRPGS

TrEMBL top hitse value%identityAlignment
A0A4Z1EJN7 Uncharacterized protein9.3e-0427.27Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIP
        PG S+S +++PG   TL G ++ G+    P     L  SV  +PG+ T   G  +   G +  L  SV  +P              G    L  S + +P
Subjt:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIP

Query:  GVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPG
        G  +   G+++  PG  ++L  S+  +PG  T   G +   PG
Subjt:  GVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPG

A0A4Z1FPA8 Uncharacterized protein3.2e-0426.09Show/hide
Query:  LSSSVVVIPGGAYTLLGKSLGRPRNFPGLSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFW
        LS S + +PG   T+ G+++  P +   L  SV  +PG+ T   G  +   G +  L  S+  +P   T F G              S++ +PG  +   
Subjt:  LSSSVVVIPGGAYTLLGKSLGRPRNFPGLSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFW

Query:  GKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS
        G+++  PG  ++L  S+  +PG  T   G +   PG +
Subjt:  GKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS

A0A4Z1JYD4 Uncharacterized protein2.4e-0427.67Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL---------GI
        PG S+S +++PG   TL G ++ G+    P     L  SV  +PG+ T   G  +   G +  L  SV  +P   T   G      G +         G 
Subjt:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL---------GI

Query:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKS--LGRPGSS
        +  L  SV  +PG  T   G +   PG+ ++L  S+ ++PG+     G +  +  PGS+
Subjt:  SQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKS--LGRPGSS

A0A6P7XL68 corneodesmosin3.8e-0532.07Show/hide
Query:  GSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGL---SSSVVVIPGGAYTLL----GKSLGRPRNFPGLSSSVVVIP-GVRTLFWGKAWRGLGIS
        G   GF  S +S  +S SSQ    S G S G  + FPG    SS VV I GG+        G S  +   + G SS V+ +P G  ++ +G +    G  
Subjt:  GSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGL---SSSVVVIPGGAYTLL----GKSLGRPRNFPGLSSSVVVIP-GVRTLFWGKAWRGLGIS

Query:  QGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS
           SS V+ +P   ++ +G + G  G     SS V+ +PG  ++ +G S G  G   S SS ++ + G      G S G  GSS
Subjt:  QGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWGKSLGRPGSS

G2XRP8 Uncharacterized protein5.5e-0430.5Show/hide
Query:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL--GISQGLSSS
        PG S+S+V +PG   TL G ++ G+    P     L  S   +PG+ T   G  +   G +  L  SV  +P   T   G A    G    G +  L  S
Subjt:  PGLSSSVVVIPGGAYTLLGKSL-GRPRNFPG----LSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAW---GGL--GISQGLSSS

Query:  VMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWG
        V  +PG  T   G +   PG+ ++L  S+  +PG  T   G
Subjt:  VMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPGVRTLFWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCAGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGAGGCTTTGGGATTTCCCAGGCCTCTCTTC
AAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGGTGCG
TACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAG
AGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCT
CTTCAAGCGTTATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCTGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGG
GTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTAGGGAAAAAGC
TTGGGGAGGCCTGGAATTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGTGGCCTGGGAATTTCCCAAGC
CTCTCTTCAAGCTGCATAGTCATCCCAGGGAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTC
CTCTGGGGAAAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGTTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCAGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGAGGCTTTGGGATTTCCCAGGCCTCTCTTC
AAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGGTGCG
TACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAG
AGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCT
CTTCAAGCGTTATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCTGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGG
GTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTAGGGAAAAAGC
TTGGGGAGGCCTGGAATTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGTGGCCTGGGAATTTCCCAAGC
CTCTCTTCAAGCTGCATAGTCATCCCAGGGAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTC
CTCTGGGGAAAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGTTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
Protein sequenceShow/hide protein sequence
MRSSLVSPSLVCLPHSWTHVRILGLRSDYQTQSSPIPCLMVGLSLGMRTSTFPAWLEKFEGSLGGFGISQASLQASWSSQGCVHSSGKSLGRPRNFPGLSSSVVVIPGGA
YTLLGKSLGRPRNFPGLSSSVVVIPGVRTLFWGKAWRGLGISQGLSSSVVVIPEVRTLFWGKAWGGLGISQGLSSSVMVIPGVRTLFWGKSLGRPGKFLSLSSSIVVIPG
VRTLFWGKSLGRPGSSRASLQASSSSQGCVHSSREKAWGGLEFPEPLFKHRRHPRGAYTLLGKKLGVAWEFPKPLFKLHSHPREHLPFGLNRFGYDNRSSVVVFPGVRTL
LWGKALGGLGISRVSLQALSKLLKRNSE