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Lag0036358 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036358
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmalignant T-cell-amplified sequence 1 homolog
Genome locationchr3:44983456..44984464
RNA-Seq ExpressionLag0036358
SyntenyLag0036358
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR016437 - MCT-1/Tma20
IPR041366 - Pre-PUA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACA24498.1 pseudouridine synthase and archaeosine transglycosylase-like protein [Cucumis sativus]1.1e-3598.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

XP_008450609.1 PREDICTED: malignant T-cell-amplified sequence 1 homolog [Cucumis melo]1.1e-3598.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

XP_011659846.1 malignant T-cell-amplified sequence 1 homolog [Cucumis sativus]1.1e-3598.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

XP_022135845.1 malignant T-cell-amplified sequence 1 homolog [Momordica charantia]1.1e-3598.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

XP_038887727.1 malignant T-cell-amplified sequence 1 homolog [Benincasa hispida]1.1e-3598.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

TrEMBL top hitse value%identityAlignment
A0A0A0LYF6 PUA domain-containing protein5.2e-3698.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

A0A1S3BPJ3 malignant T-cell-amplified sequence 1 homolog5.2e-3698.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

A0A6J1C273 malignant T-cell-amplified sequence 1 homolog5.2e-3698.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

A0A6J1HVW2 malignant T-cell-amplified sequence 1 homolog1.2e-3597.5Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQR+IRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

B3TLK5 Pseudouridine synthase and archaeosine transglycosylase-like protein5.2e-3698.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

SwissProt top hitse value%identityAlignment
Q2KIE4 Malignant T-cell-amplified sequence 12.7e-1342.68Show/hide
Query:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF
        E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   LFF  R+GP+ PTLR+L  +PF
Subjt:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF

Q4G009 Malignant T-cell-amplified sequence 12.7e-1342.68Show/hide
Query:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF
        E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   LFF  R+GP+ PTLR+L  +PF
Subjt:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF

Q86KL4 Malignant T-cell-amplified sequence 1 homolog2.1e-1854.05Show/hide
Query:  SAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        +  NQ+K+S+QR I+ SI  +YP L+ + +D+ PKK P++  KCQNH+NLV++NN  LFFN R+GPY PTLR L
Subjt:  SAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL

Q9DB27 Malignant T-cell-amplified sequence 12.7e-1342.68Show/hide
Query:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF
        E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   LFF  R+GP+ PTLR+L  +PF
Subjt:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF

Q9ULC4 Malignant T-cell-amplified sequence 12.7e-1342.68Show/hide
Query:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF
        E+VS   Q+K SV + I+  + E++PG+EP L+ ++PKK P+ + +C  H+ ++ VN   LFF  R+GP+ PTLR+L  +PF
Subjt:  EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL-SFPF

Arabidopsis top hitse value%identityAlignment
AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein5.0e-3178.75Show/hide
Query:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL
        F  E++S+QNQVKASVQR+IRQSI +EYPGLE V++DLLPKK PLIV KC NHL LVVVNNVPLFF IRDGPYMPTLR+L
Subjt:  FSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGATTTCTTCCCTTATTTTCATATGTTTCTTTTTATACTGGTCTCTGGATTTTGCTCGAATGGGGTCTTCTTTCTCGTTTAAATAGTGGGTTTTCTACTGAAGA
CGTGTCTGCTCAGAATCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATCGCGGAAGAATATCCTGGACTAGAGCCAGTTTTGGATGATTTGCTGCCTAAAA
AAGCCCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGTGATGGGCCCTACATGCCTACCTTAAGG
GTGCTTTCGTTTCCTTTCTACTTTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGATTTCTTCCCTTATTTTCATATGTTTCTTTTTATACTGGTCTCTGGATTTTGCTCGAATGGGGTCTTCTTTCTCGTTTAAATAGTGGGTTTTCTACTGAAGA
CGTGTCTGCTCAGAATCAAGTCAAGGCATCGGTGCAACGGAAAATTCGGCAAAGTATCGCGGAAGAATATCCTGGACTAGAGCCAGTTTTGGATGATTTGCTGCCTAAAA
AAGCCCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAACAATGTGCCACTCTTTTTCAATATCCGTGATGGGCCCTACATGCCTACCTTAAGG
GTGCTTTCGTTTCCTTTCTACTTTGCCTAG
Protein sequenceShow/hide protein sequence
MVGFLPLFSYVSFYTGLWILLEWGLLSRLNSGFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLR
VLSFPFYFA