; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036359 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036359
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:44987350..44993980
RNA-Seq ExpressionLag0036359
SyntenyLag0036359
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70431.1 hypothetical protein VITISV_030910 [Vitis vinifera]3.9e-2026.26Show/hide
Query:  ILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILSYKPPRPT
        +  + S   +NL KS I GIN    ++ + A  +  ++ E P +Y  LPL G+PK++ FW P++E+I +RL  W  +Y S G      +  LS+ P    
Subjt:  ILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILSYKPPRPT

Query:  SQLILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKY
            L L+ +       K +   R         L+ GA       K  LV   +V++ K     GFG   + +    G+W+             +I S Y
Subjt:  SQLILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKY

Query:  GSSITTSWKSLPLCKRALEVHQASKSHHQQNRSP-------SGERWLFQ-----------------YKTTMIKDVWKEE---NSF---WDLQIRRNLKDE
        G+     W +  + + +      + +   Q  SP       +GER  F                  Y+   +K++       NSF   W+L  RRNL D 
Subjt:  GSSITTSWKSLPLCKRALEVHQASKSHHQQNRSP-------SGERWLFQ-----------------YKTTMIKDVWKEE---NSF---WDLQIRRNLKDE

Query:  EVAEWADFSLDLSPIVLSLK-EDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWC
        E+         LS +  S    DS  W  S     + KS  + +   S  +    AK  W      K K               K   +    AL P WC
Subjt:  EVAEWADFSLDLSPIVLSLK-EDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWC

Query:  TLCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP
         LCKAN ES +HL +HCP T   WNK+ +  G  W  P
Subjt:  TLCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.6e-2124.8Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +   ++ A  +G   G  P +Y  +PL G P S +FW  +++KI+K+L  W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         Q+ +  +      +    W+++           L++GA     ISL  WN+ V           P  + G G   +N   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      + + K +  ++ S   + W            LF   T     +K+ W   ++ W L I 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   + +       W  + +N   T S+   +    I      P+L K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWKNLISFRRRRPPLTQRHRSP
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +V++   N          G   F     +LWK  I   R      Q+ ++P
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWKNLISFRRRRPPLTQRHRSP

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.4e-2325.57Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +    +    +G   G+ P TY  +PL G P S +FW  I++KI+K+L +W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         QL +  +      +    W+++           L++G      ISL  WN+ V           P  + G G   ++   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      +   K +  ++ S   + W            LF   T     +KD+W      W++ + 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   +         W  + +N   T S+  D+   S       PSL K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +VK+   N          G   F     LLWK
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.9e-2325.57Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +    +    +G   G+ P TY  +PL G P S +FW  I++KI+K+L +W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         QL +  +      +    W+++           L++G      ISL  WN+ V           P  + G G   ++   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      +   K +  ++ S   + W            LF   T     +KD+W      W++ + 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   +         W  + +N   T S+  D+   S       PSL K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +VK+   N          G   F     LLWK
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]7.9e-2125.17Show/hide
Query:  VNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGILSYKPPRPTSQLILCLYLLCQTRC
        +N  K  + GIN D   +   A  +G ++G  P  Y  LPL G P++L FW P++EK+EKRL +W  ++ S G             +L L   +L     
Subjt:  VNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGILSYKPPRPTSQLILCLYLLCQTRC

Query:  FGKWKDYTRITCGKMGL--TLFDGAI--SLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKYG----------
        +  +    +I CG +G    L  G +   +    K  LV   +V K K     G G+    +     +W+             +I+SKYG          
Subjt:  FGKWKDYTRITCGKMGL--TLFDGAI--SLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKYG----------

Query:  ---SSITTSWKS--------LPLCKRALEVHQASKSHHQQNRSPSGERWLFQYKTTMIKDVWKEEN--SF---------WDLQIRRNLKDEEVAEWADFS
            S  + WK         L  CK   EV    +    ++    G     Q+    +      +N  SF         W+   RRNL + E+ E A   
Subjt:  ---SSITTSWKS--------LPLCKRALEVHQASKSHHQQNRSPSGERWLFQYKTTMIKDVWKEEN--SF---------WDLQIRRNLKDEEVAEWADFS

Query:  LDLSPIVLS-LKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWCTLCKANYES
          +  + LS  + D+ +W        + KS    + N  I+         WK     K KI              +  +++  + LSP WC+LCKA  ES
Subjt:  LDLSPIVLS-LKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWCTLCKANYES

Query:  QNHLSIHCPYTYYFWNKILQAF--GWYLP
         NH+ +HC YT   W K+ Q     W +P
Subjt:  QNHLSIHCPYTYYFWNKILQAF--GWYLP

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein2.2e-2124.8Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +   ++ A  +G   G  P +Y  +PL G P S +FW  +++KI+K+L  W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         Q+ +  +      +    W+++           L++GA     ISL  WN+ V           P  + G G   +N   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      + + K +  ++ S   + W            LF   T     +K+ W   ++ W L I 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   + +       W  + +N   T S+   +    I      P+L K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWKNLISFRRRRPPLTQRHRSP
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +V++   N          G   F     +LWK  I   R      Q+ ++P
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWKNLISFRRRRPPLTQRHRSP

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein4.1e-2325.57Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +    +    +G   G+ P TY  +PL G P S +FW  I++KI+K+L +W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         QL +  +      +    W+++           L++G      ISL  WN+ V           P  + G G   ++   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      +   K +  ++ S   + W            LF   T     +KD+W      W++ + 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   +         W  + +N   T S+  D+   S       PSL K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +VK+   N          G   F     LLWK
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.4e-2325.57Show/hide
Query:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT
        +  +   +S  N+NL KS I  INV +    +    +G   G+ P TY  +PL G P S +FW  I++KI+K+L +W  S  S+G  I    S     P 
Subjt:  VARILPKSSSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGIL---SYKPPRPT

Query:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------
         QL +  +      +    W+++           L++G      ISL  WN+ V           P  + G G   ++   +    +W+           
Subjt:  SQL-ILCLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGA-----ISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYE--GRWI-----------

Query:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR
          LI SKY              SS  + WK++  C      +   K +  ++ S   + W            LF   T     +KD+W      W++ + 
Subjt:  --LIKSKYG-------------SSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERW------------LFQYKTT---MIKDVWKEENSFWDLQIR

Query:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN
        R L+D E   W +    L   +         W  + +N   T S+  D+   S       PSL K  WK    KK K  I  L  G  N   + +    N
Subjt:  RNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSII---LDPSLAKGTWKDTTQKKGK--IHPLRGGSQNHQYKRKSSKKN

Query:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK
            LSP+WC +C  + E  NHL IHCPY+   W+K      W    P +VK+   N          G   F     LLWK
Subjt:  ALLALSPSWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTL--------GHHPFKDTKALLWK

A0A803P465 Uncharacterized protein2.9e-2125.45Show/hide
Query:  SSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILS---------YKP
        S   +NL KS+++GI +D  ++   AR+ G ++G  P  Y  +PL GSP+  SFW+P+++K  KRL  W  ++ S+G      + +LS         +K 
Subjt:  SSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILS---------YKP

Query:  PRPTSQLILCL---YLLCQTRCFG-----KWKDYTRITC-GKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIM--NHPPYEGRWILIKS
        PR  ++ +  +   +L   +   G      W +  R    G +G+    G + L   NK++L+  L      P  QN     ++   +   +  W    S
Subjt:  PRPTSQLILCL---YLLCQTRCFG-----KWKDYTRITC-GKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIM--NHPPYEGRWILIKS

Query:  KYGSSITTS--WKSLPLCKRALEVHQASKSHHQQNRSPSGER-------WLFQY---------------KTTMIKDVWKEEN------SFWDLQIRRNLK
        K GS ++    W+ +      L        H +  R   G+R       W+  Y               + T IK++  +E         W+ + RRNL 
Subjt:  KYGSSITTS--WKSLPLCKRALEVHQASKSHHQQNRSPSGER-------WLFQY---------------KTTMIKDVWKEEN------SFWDLQIRRNLK

Query:  DEEVAEWADFSLDLSPI-VLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPS
        D E+         +  + VLS+ EDS  W P P    S KS    M +          K  WK     K K+       +      K  K+   L +SP 
Subjt:  DEEVAEWADFSLDLSPI-VLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPS

Query:  WCTLCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP
        WC  CK + ES  HL + C +    W  +L  FG  W +P
Subjt:  WCTLCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)2.9e-2126.09Show/hide
Query:  SSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILSYKPPRPTSQLIL
        S   +N  KS I+GIN  + V+ N A  +G ++G  P  Y  LPL G+P++L+FW P++EK+EKRL  W  +  S+G      + +LS  P    S   +
Subjt:  SSHNVNLHKSKIIGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEG------EGILSYKPPRPTSQLIL

Query:  CLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKYGSSIT
         + +  +                 M   L++G   L    K  LV    VTK K     G G     +     +W+             +IKSKYG   +
Subjt:  CLYLLCQTRCFGKWKDYTRITCGKMGLTLFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWI-------------LIKSKYGSSIT

Query:  TSWKSLPLCKRAL-----EVHQASKSHHQQNRSPSG---------ERWLFQYKTTMIKDVWKEENSF--------------------WDLQIRRNLKDEE
          W +  + K +      E+ +   S  Q  R   G         + WL   K  ++KD++   +S                     WD   RRNL + E
Subjt:  TSWKSLPLCKRAL-----EVHQASKSHHQQNRSPSG---------ERWLFQYKTTMIKDVWKEENSF--------------------WDLQIRRNLKDEE

Query:  VAEWADFSLDLSPIVL-SLKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWCT
        +AE       L  + L   + D   W        S KS    + + +  + P  +   WK  T  K +       +          ++   + LSPSWC 
Subjt:  VAEWADFSLDLSPIVL-SLKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSPSWCT

Query:  LCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP
        LCK N E+ +HL +HC Y+   W K+L A G  W +P
Subjt:  LCKANYESQNHLSIHCPYTYYFWNKILQAFG--WYLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAGATATAGGAAAGCAAGCCAGTTGTTGTGAGAGTGTGTCGGGAGACTGTAAGAATCCCCAGTTAGAACAATATGCCCTTTTGCACAAAGCTACATCAAGCAA
ATCTTGGACTCTCTTGATTGAGCCATTGATACTGAGACCTCAGATGTTGGAAGAATGTCTGAGGGAAGTTCGTATGGCTGGCGGTTTTTTTGGCAAGGCAAAGGTGTTAT
GGTCAAATGTGGCAAAGAGAAAAACAGAAGAGGACAACCTAGAGGCTGGGGTAGCAAGAATCTTGCCAAAATCCTCTAGTCATAATGTTAACCTCCACAAATCAAAGATC
ATTGGCATAAATGTTGACTCCGTGGTTATTGAAAACTATGCAAGGAAGTATGGCTGGAAAATGGGTGAACGGCCGAACACGTATTTCGCTCTTCCTTTATACGGCTCCCC
AAAATCCTTATCATTTTGGCAACCTATTATTGAAAAGATTGAAAAACGGCTCTTTGCTTGGGGTTCATCTTACACTTCAGAGGGGGAAGGCATACTCTCATACAAGCCAC
CTCGTCCAACCTCCCAACTTATTTTATGTCTCTATTTACTATGCCAAACAAGGTGCTTCGGGAAGTGGAAAGATTATACAAGAATTACTTGTGGAAAGATGGGTCTCACC
TTGTTCGATGGAGCAATATCACTCTCCCATTGGAACAAGGCGGTCTTGGTCTCCACACTATTGGTGACAAAAATAAAGCCTTACTTGCAAAATGGATTTGGCGATACTAT
CATGAACCATCCGCCTTATGAAGGAAGGTGGATTCTTATTAAGTCTAAATATGGCTCATCGATTACCACTTCTTGGAAATCCCTTCCTTTGTGCAAAAGGGCCTTGGAAG
TCCATCAAGCATCAAAGTCTCATCACCAGCAGAATCGTTCACCAAGTGGGGAACGATGGTTGTTCCAATACAAAACAACTATGATCAAAGATGTTTGGAAGGAGGAAAAT
AGTTTTTGGGACCTACAGATTAGAAGAAACTTAAAAGATGAGGAAGTTGCTGAATGGGCTGACTTCAGCCTCGATCTCTCTCCTATTGTTCTTTCCTTGAAGGAAGATTC
TTGGAAATGGCTCCCTAGCCCAGATAATTTTTCCTCTACAAAATCCTTGATGATGGACATGGGAAACAAATCAATCATCCTAGACCCTTCATTAGCCAAAGGAACCTGGA
AAGACACAACCCAAAAAAAGGGTAAAATTCATCCTCTGAGGGGTGGTTCACAAAACCATCAGTACAAAAGAAAATCTTCAAAGAAGAATGCCTTATTGGCGTTGTCTCCA
AGCTGGTGCACTTTGTGTAAAGCCAACTATGAATCTCAAAATCACCTTTCCATCCACTGTCCATACACATATTACTTCTGGAACAAAATTTTGCAAGCTTTTGGATGGTA
TTTACCCTTTCCTGGGGAGGTAAAAGCTTTCTATATCAACACTTTGGGTCATCACCCTTTTAAGGATACAAAAGCACTTCTATGGAAGAATCTCATCAGCTTCCGCCGCC
GCCGTCCGCCTCTTACCCAGCGCCACCGTTCGCCTCTTACCCAGTCGTCGCCATTCAACTCTCAGCCGCCGCCGTTACCCGAGTGCAAGGAGATCCGCAGCAGCCGTCTG
ATCCAATCGCGACCCACAACCAGGACTCGACCCGCGATTTTGCGCCGTGACCCGTCACCTCTGCAAGTCGTTCCTTTCTGTCCACTCCGTGCTCGCGATTTTGCGCCGCC
GCCGTTTGCGGTTTTGCTCCGTCAACTCCGGCCGCTCGTTTCCGTCAACTCCGGCCACTCGCCTGGGATAGATTACTTTCTTTTTCGGTTTTGTTGGGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAGATATAGGAAAGCAAGCCAGTTGTTGTGAGAGTGTGTCGGGAGACTGTAAGAATCCCCAGTTAGAACAATATGCCCTTTTGCACAAAGCTACATCAAGCAA
ATCTTGGACTCTCTTGATTGAGCCATTGATACTGAGACCTCAGATGTTGGAAGAATGTCTGAGGGAAGTTCGTATGGCTGGCGGTTTTTTTGGCAAGGCAAAGGTGTTAT
GGTCAAATGTGGCAAAGAGAAAAACAGAAGAGGACAACCTAGAGGCTGGGGTAGCAAGAATCTTGCCAAAATCCTCTAGTCATAATGTTAACCTCCACAAATCAAAGATC
ATTGGCATAAATGTTGACTCCGTGGTTATTGAAAACTATGCAAGGAAGTATGGCTGGAAAATGGGTGAACGGCCGAACACGTATTTCGCTCTTCCTTTATACGGCTCCCC
AAAATCCTTATCATTTTGGCAACCTATTATTGAAAAGATTGAAAAACGGCTCTTTGCTTGGGGTTCATCTTACACTTCAGAGGGGGAAGGCATACTCTCATACAAGCCAC
CTCGTCCAACCTCCCAACTTATTTTATGTCTCTATTTACTATGCCAAACAAGGTGCTTCGGGAAGTGGAAAGATTATACAAGAATTACTTGTGGAAAGATGGGTCTCACC
TTGTTCGATGGAGCAATATCACTCTCCCATTGGAACAAGGCGGTCTTGGTCTCCACACTATTGGTGACAAAAATAAAGCCTTACTTGCAAAATGGATTTGGCGATACTAT
CATGAACCATCCGCCTTATGAAGGAAGGTGGATTCTTATTAAGTCTAAATATGGCTCATCGATTACCACTTCTTGGAAATCCCTTCCTTTGTGCAAAAGGGCCTTGGAAG
TCCATCAAGCATCAAAGTCTCATCACCAGCAGAATCGTTCACCAAGTGGGGAACGATGGTTGTTCCAATACAAAACAACTATGATCAAAGATGTTTGGAAGGAGGAAAAT
AGTTTTTGGGACCTACAGATTAGAAGAAACTTAAAAGATGAGGAAGTTGCTGAATGGGCTGACTTCAGCCTCGATCTCTCTCCTATTGTTCTTTCCTTGAAGGAAGATTC
TTGGAAATGGCTCCCTAGCCCAGATAATTTTTCCTCTACAAAATCCTTGATGATGGACATGGGAAACAAATCAATCATCCTAGACCCTTCATTAGCCAAAGGAACCTGGA
AAGACACAACCCAAAAAAAGGGTAAAATTCATCCTCTGAGGGGTGGTTCACAAAACCATCAGTACAAAAGAAAATCTTCAAAGAAGAATGCCTTATTGGCGTTGTCTCCA
AGCTGGTGCACTTTGTGTAAAGCCAACTATGAATCTCAAAATCACCTTTCCATCCACTGTCCATACACATATTACTTCTGGAACAAAATTTTGCAAGCTTTTGGATGGTA
TTTACCCTTTCCTGGGGAGGTAAAAGCTTTCTATATCAACACTTTGGGTCATCACCCTTTTAAGGATACAAAAGCACTTCTATGGAAGAATCTCATCAGCTTCCGCCGCC
GCCGTCCGCCTCTTACCCAGCGCCACCGTTCGCCTCTTACCCAGTCGTCGCCATTCAACTCTCAGCCGCCGCCGTTACCCGAGTGCAAGGAGATCCGCAGCAGCCGTCTG
ATCCAATCGCGACCCACAACCAGGACTCGACCCGCGATTTTGCGCCGTGACCCGTCACCTCTGCAAGTCGTTCCTTTCTGTCCACTCCGTGCTCGCGATTTTGCGCCGCC
GCCGTTTGCGGTTTTGCTCCGTCAACTCCGGCCGCTCGTTTCCGTCAACTCCGGCCACTCGCCTGGGATAGATTACTTTCTTTTTCGGTTTTGTTGGGCTGTTTGA
Protein sequenceShow/hide protein sequence
MKQDIGKQASCCESVSGDCKNPQLEQYALLHKATSSKSWTLLIEPLILRPQMLEECLREVRMAGGFFGKAKVLWSNVAKRKTEEDNLEAGVARILPKSSSHNVNLHKSKI
IGINVDSVVIENYARKYGWKMGERPNTYFALPLYGSPKSLSFWQPIIEKIEKRLFAWGSSYTSEGEGILSYKPPRPTSQLILCLYLLCQTRCFGKWKDYTRITCGKMGLT
LFDGAISLSHWNKAVLVSTLLVTKIKPYLQNGFGDTIMNHPPYEGRWILIKSKYGSSITTSWKSLPLCKRALEVHQASKSHHQQNRSPSGERWLFQYKTTMIKDVWKEEN
SFWDLQIRRNLKDEEVAEWADFSLDLSPIVLSLKEDSWKWLPSPDNFSSTKSLMMDMGNKSIILDPSLAKGTWKDTTQKKGKIHPLRGGSQNHQYKRKSSKKNALLALSP
SWCTLCKANYESQNHLSIHCPYTYYFWNKILQAFGWYLPFPGEVKAFYINTLGHHPFKDTKALLWKNLISFRRRRPPLTQRHRSPLTQSSPFNSQPPPLPECKEIRSSRL
IQSRPTTRTRPAILRRDPSPLQVVPFCPLRARDFAPPPFAVLLRQLRPLVSVNSGHSPGIDYFLFRFCWAV