; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036363 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036363
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr3:45046562..45047509
RNA-Seq ExpressionLag0036363
SyntenyLag0036363
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]7.0e-3439.02Show/hide
Query:  APLELATEALQAMLGNEI-PNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWK
        A + L   ALQA++ N I     Q +   +A A   E QFI+ F +  PP+F+G SE +  V EW   LEA++ + G + Q +V+GA FML+G A  WW 
Subjt:  APLELATEALQAMLGNEI-PNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWK

Query:  AVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAA
         V   ++    PI+ +  K L+ D++  +    E E EF+ L Q  L V QY ++F E S   LDL+ TE  +I RFV GL   I+G + L RPTT+A A
Subjt:  AVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAA

Query:  LASARMLDRD-IPRTEQSQEVGTSSGAKKKHEEEASVPSQKVRRSP
        +  A ++D+D I + +  Q+VG SSG K+K    +S  SQ  + SP
Subjt:  LASARMLDRD-IPRTEQSQEVGTSSGAKKKHEEEASVPSQKVRRSP

XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]4.6e-3337.1Show/hide
Query:  PAFPPAPLELATEALQAMLGNEIPNNLQHVGANEAPAHG----EEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLK
        P   P  + L  EALQ +L N    N       + P+ G    EEVQFI+ F +  PP F+G SE   A  EW   LEA++ + G +   +V+GA FML+
Subjt:  PAFPPAPLELATEALQAMLGNEIPNNLQHVGANEAPAHG----EEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLK

Query:  GYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLG
        G A  WW++V   ++    P++ + FK L+ +++       E  AEF+ L Q  L V QY R+F ELS   +  + TE+++I++F++GLR EI+GL+ L 
Subjt:  GYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLG

Query:  RPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKKHEE-EASVPSQ
         PTT+AAA+  A ++D+ +   +  Q +G+SSG K+K     +S PS+
Subjt:  RPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKKHEE-EASVPSQ

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]3.4e-3645.36Show/hide
Query:  EVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELE
        E +FIK F +  PP+FDG SE + AV EW   LEA++ + G   Q +V+GA FML+G A  WW +V   ++    PI  + FK L+ D++         E
Subjt:  EVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELE

Query:  AEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK
        AEF+ L+QG LSV QY R+F ELS   L+L+ TE ++I RFV GLR  IRG V L RPTT+A A+  A ++D+D+  +     EVG+SSG K+K
Subjt:  AEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]1.2e-3339.15Show/hide
Query:  PAFPPAPL-ELATEALQAMLGNEIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYA
        P FPPA   ELA     A +G       +H+   ++     E QFIK F +  PP+F G SE +    EW   LEA++ + G   Q +V+GA FML+  A
Subjt:  PAFPPAPL-ELATEALQAMLGNEIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYA

Query:  RTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPT
          WW +V  T++    P+  + FK L+ DH+         E EF+ L+QG L+V QY R+F ELS   L+L+ TE ++I RFV GL   IRG V L RP 
Subjt:  RTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPT

Query:  TFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK
        T+A A+    ++D+D+  R +   EVG+S G K+K
Subjt:  TFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK

XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]2.0e-3336.67Show/hide
Query:  EADPPAFPPA--PLELATEALQAMLGN-EIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAF
        +A P   P     + L  EALQ +L N       Q      A    +EVQFI+ F +  PP F+G SE   A  EW   LEA++ + G +   +V+GA F
Subjt:  EADPPAFPPA--PLELATEALQAMLGN-EIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAF

Query:  MLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLV
        ML+G A  WW++V   ++    P++ + FK L+ +++       E  AEF+ L QG L+V QY R+F ELS   +  + TE+++I++F++GLR+EI+GL+
Subjt:  MLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLV

Query:  RLGRPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKK
         +  PTT+AAA+  A ++D+ +   +  Q +G+SSG K+K
Subjt:  RLGRPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKK

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196033.4e-3439.02Show/hide
Query:  APLELATEALQAMLGNEI-PNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWK
        A + L   ALQA++ N I     Q +   +A A   E QFI+ F +  PP+F+G SE +  V EW   LEA++ + G + Q +V+GA FML+G A  WW 
Subjt:  APLELATEALQAMLGNEI-PNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWK

Query:  AVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAA
         V   ++    PI+ +  K L+ D++  +    E E EF+ L Q  L V QY ++F E S   LDL+ TE  +I RFV GL   I+G + L RPTT+A A
Subjt:  AVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAA

Query:  LASARMLDRD-IPRTEQSQEVGTSSGAKKKHEEEASVPSQKVRRSP
        +  A ++D+D I + +  Q+VG SSG K+K    +S  SQ  + SP
Subjt:  LASARMLDRD-IPRTEQSQEVGTSSGAKKKHEEEASVPSQKVRRSP

A0A6J1DNV8 uncharacterized protein LOC1110229252.2e-3337.1Show/hide
Query:  PAFPPAPLELATEALQAMLGNEIPNNLQHVGANEAPAHG----EEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLK
        P   P  + L  EALQ +L N    N       + P+ G    EEVQFI+ F +  PP F+G SE   A  EW   LEA++ + G +   +V+GA FML+
Subjt:  PAFPPAPLELATEALQAMLGNEIPNNLQHVGANEAPAHG----EEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLK

Query:  GYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLG
        G A  WW++V   ++    P++ + FK L+ +++       E  AEF+ L Q  L V QY R+F ELS   +  + TE+++I++F++GLR EI+GL+ L 
Subjt:  GYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLG

Query:  RPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKKHEE-EASVPSQ
         PTT+AAA+  A ++D+ +   +  Q +G+SSG K+K     +S PS+
Subjt:  RPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKKHEE-EASVPSQ

A0A6J1DTA8 uncharacterized protein LOC1110241149.9e-3436.67Show/hide
Query:  EADPPAFPPA--PLELATEALQAMLGN-EIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAF
        +A P   P     + L  EALQ +L N       Q      A    +EVQFI+ F +  PP F+G SE   A  EW   LEA++ + G +   +V+GA F
Subjt:  EADPPAFPPA--PLELATEALQAMLGN-EIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAF

Query:  MLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLV
        ML+G A  WW++V   ++    P++ + FK L+ +++       E  AEF+ L QG L+V QY R+F ELS   +  + TE+++I++F++GLR+EI+GL+
Subjt:  MLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLV

Query:  RLGRPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKK
         +  PTT+AAA+  A ++D+ +   +  Q +G+SSG K+K
Subjt:  RLGRPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKK

A0A6J1DUM2 uncharacterized protein LOC1110232471.6e-3645.36Show/hide
Query:  EVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELE
        E +FIK F +  PP+FDG SE + AV EW   LEA++ + G   Q +V+GA FML+G A  WW +V   ++    PI  + FK L+ D++         E
Subjt:  EVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELE

Query:  AEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK
        AEF+ L+QG LSV QY R+F ELS   L+L+ TE ++I RFV GLR  IRG V L RPTT+A A+  A ++D+D+  +     EVG+SSG K+K
Subjt:  AEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPTTFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK

A0A6J1DVA0 uncharacterized protein LOC1110234245.8e-3439.15Show/hide
Query:  PAFPPAPL-ELATEALQAMLGNEIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYA
        P FPPA   ELA     A +G       +H+   ++     E QFIK F +  PP+F G SE +    EW   LEA++ + G   Q +V+GA FML+  A
Subjt:  PAFPPAPL-ELATEALQAMLGNEIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGANAQQRVQGAAFMLKGYA

Query:  RTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPT
          WW +V  T++    P+  + FK L+ DH+         E EF+ L+QG L+V QY R+F ELS   L+L+ TE ++I RFV GL   IRG V L RP 
Subjt:  RTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGLVRLGRPT

Query:  TFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK
        T+A A+    ++D+D+  R +   EVG+S G K+K
Subjt:  TFAAALASARMLDRDIP-RTEQSQEVGTSSGAKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAGTAGCAGTCAAGATAGTGGACGTTCTGGTCCTCCAGACGTTTCCGAGGTTAATTCGCATCTGGAGGCGGATCCTCCCGCTTTTCCCCCAGCACCTCTTGA
GCTGGCAACGGAGGCGTTGCAAGCGATGCTTGGCAATGAAATTCCGAACAACCTGCAGCACGTCGGTGCTAACGAAGCCCCTGCTCATGGCGAAGAGGTGCAGTTTATCA
AGAGTTTCGTGAAGGCGAAGCCTCCTTCATTTGATGGACGCTCGGAAAGTTCTGAAGCAGTCGTAGAATGGACTGCCGCGTTGGAAGCGATATTTCAATTCTTTGGAGCT
AATGCCCAACAACGGGTCCAAGGAGCCGCCTTTATGCTTAAGGGTTACGCTCGCACTTGGTGGAAGGCAGTGGGTCAAACCAAGAATCGCCCGGAGAACCCTATTTCCTT
GTCAGGGTTCAAAGGTCTGGTGCGAGACCATTTTGGCTGCCGTTTTGCTGGTGTTGAGCTAGAAGCGGAATTTGTCTCTCTTATTCAAGGGATTTTGTCCGTAGAGCAAT
ACGTCAGGAGGTTCGAAGAGTTGTCCTGTCATGTCTTGGATTTGGTTGCCACCGAGGAAATTAGGATCAACCGATTCGTTAACGGGCTCCGCATAGAAATTCGAGGTTTG
GTCAGGCTGGGTCGACCAACCACATTCGCAGCAGCTCTGGCAAGCGCCCGGATGTTGGATAGGGACATCCCCAGGACAGAGCAGTCCCAAGAGGTTGGCACGTCATCTGG
TGCCAAGAAGAAGCACGAAGAGGAAGCGTCTGTGCCTAGTCAGAAGGTTAGAAGATCTCCATTAGGATCTCGCGAGTGCGCTGATGAGTTCTGGCCCTTTGTCACCGATG
AGGAGCTCAAGGCAGAGTACCCAGAACTTTACGATGACGCTGACTCTAATGTTGAGGAAAGCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAGTAGCAGTCAAGATAGTGGACGTTCTGGTCCTCCAGACGTTTCCGAGGTTAATTCGCATCTGGAGGCGGATCCTCCCGCTTTTCCCCCAGCACCTCTTGA
GCTGGCAACGGAGGCGTTGCAAGCGATGCTTGGCAATGAAATTCCGAACAACCTGCAGCACGTCGGTGCTAACGAAGCCCCTGCTCATGGCGAAGAGGTGCAGTTTATCA
AGAGTTTCGTGAAGGCGAAGCCTCCTTCATTTGATGGACGCTCGGAAAGTTCTGAAGCAGTCGTAGAATGGACTGCCGCGTTGGAAGCGATATTTCAATTCTTTGGAGCT
AATGCCCAACAACGGGTCCAAGGAGCCGCCTTTATGCTTAAGGGTTACGCTCGCACTTGGTGGAAGGCAGTGGGTCAAACCAAGAATCGCCCGGAGAACCCTATTTCCTT
GTCAGGGTTCAAAGGTCTGGTGCGAGACCATTTTGGCTGCCGTTTTGCTGGTGTTGAGCTAGAAGCGGAATTTGTCTCTCTTATTCAAGGGATTTTGTCCGTAGAGCAAT
ACGTCAGGAGGTTCGAAGAGTTGTCCTGTCATGTCTTGGATTTGGTTGCCACCGAGGAAATTAGGATCAACCGATTCGTTAACGGGCTCCGCATAGAAATTCGAGGTTTG
GTCAGGCTGGGTCGACCAACCACATTCGCAGCAGCTCTGGCAAGCGCCCGGATGTTGGATAGGGACATCCCCAGGACAGAGCAGTCCCAAGAGGTTGGCACGTCATCTGG
TGCCAAGAAGAAGCACGAAGAGGAAGCGTCTGTGCCTAGTCAGAAGGTTAGAAGATCTCCATTAGGATCTCGCGAGTGCGCTGATGAGTTCTGGCCCTTTGTCACCGATG
AGGAGCTCAAGGCAGAGTACCCAGAACTTTACGATGACGCTGACTCTAATGTTGAGGAAAGCTCCTAA
Protein sequenceShow/hide protein sequence
MSSSSSQDSGRSGPPDVSEVNSHLEADPPAFPPAPLELATEALQAMLGNEIPNNLQHVGANEAPAHGEEVQFIKSFVKAKPPSFDGRSESSEAVVEWTAALEAIFQFFGA
NAQQRVQGAAFMLKGYARTWWKAVGQTKNRPENPISLSGFKGLVRDHFGCRFAGVELEAEFVSLIQGILSVEQYVRRFEELSCHVLDLVATEEIRINRFVNGLRIEIRGL
VRLGRPTTFAAALASARMLDRDIPRTEQSQEVGTSSGAKKKHEEEASVPSQKVRRSPLGSRECADEFWPFVTDEELKAEYPELYDDADSNVEESS