; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036371 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036371
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description39S ribosomal protein L46, mitochondrial-like isoform X1
Genome locationchr3:45269506..45274737
RNA-Seq ExpressionLag0036371
SyntenyLag0036371
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR040008 - 39S ribosomal protein L46, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595682.1 39S ribosomal protein L46, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3092Show/hide
Query:  FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        F+MQ SF L GQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
KAG7027644.1 hypothetical protein SDJN02_11659 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-3092Show/hide
Query:  FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        F+MQ SF L GQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
XP_022925098.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata]6.4e-3093.24Show/hide
Query:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        +MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
XP_022966446.1 39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita maxima]6.4e-3093.24Show/hide
Query:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        +MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
XP_022992541.1 54S ribosomal protein L17, mitochondrial-like isoform X1 [Cucurbita maxima]1.5e-3170.27Show/hide
Query:  KPIVYATFGDP-------------------------FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKY
        KPIVYAT G P                         F+MQRSF LA QL KRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+Y
Subjt:  KPIVYATFGDP-------------------------FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKY

Query:  PDEFLDKANAR
        PDEFLDKANAR
Subjt:  PDEFLDKANAR
TrEMBL top hitse value%identityAlignment
A0A6J1EB49 39S ribosomal protein L46, mitochondrial-like isoform X35.3e-3094.52Show/hide
Query:  MQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  MQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
A0A6J1EEA2 39S ribosomal protein L46, mitochondrial-like isoform X23.1e-3093.24Show/hide
Query:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        +MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
A0A6J1HPC7 39S ribosomal protein L46, mitochondrial-like isoform X13.1e-3093.24Show/hide
Query:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        +MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  KMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
A0A6J1HRN8 39S ribosomal protein L46, mitochondrial-like isoform X25.3e-3094.52Show/hide
Query:  MQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
        MQ SF LAGQLVKRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+YPDEFLDKANAR
Subjt:  MQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANAR
A0A6J1JTU9 54S ribosomal protein L17, mitochondrial-like isoform X17.4e-3270.27Show/hide
Query:  KPIVYATFGDP-------------------------FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKY
        KPIVYAT G P                         F+MQRSF LA QL KRRGFSTNS+KIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR+Y
Subjt:  KPIVYATFGDP-------------------------FKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKY

Query:  PDEFLDKANAR
        PDEFLDKANAR
Subjt:  PDEFLDKANAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14620.1 decoy6.8e-2278.12Show/hide
Query:  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANARS
        L  RRGF T+SDKIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RR+YPDEFLD A  R+
Subjt:  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANARS
AT1G14620.2 decoy6.8e-2278.12Show/hide
Query:  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANARS
        L  RRGF T+SDKIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RR+YPDEFLD A  R+
Subjt:  LVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRKYPDEFLDKANARS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATATTGGAGGTGGAGTTGGGGAATTTTCTTGGCAAACATTGAAGATGTTGGTTCTACATGATTGGCCAATGCCAAGGGCTAAGACTTCCTGGAGGACCTTGCT
TATATGCTTTGGTCTAATGCAGGAGCTCAGTGGTAAAAATCAACTCAAACCCATAGTTTACGCAACCTTTGGTGACCCATTCAAAATGCAAAGATCATTCTGTTTAGCTG
GTCAACTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGATAAAATTGTGGCATCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTAT
GCATTTCAGGAGTTCAAATTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGATGAATTTTTAGATAAAGCTAATGCCAGGTCAAGCGAGATTTTGTGGAGAAAGAG
CCCTTTGGCTCCAGTTTCCATATCCATTGATCCTTGGATAGACTTAACATCACCAACGGAAAGAAGAGAACAACAGAGAAAGAATGGAGAGAGGGGAAATAAGAGAGAAG
AAGATGATGAGATTGGGAAAGAAAACGTGGGAGGAACCCCAAAAGCGCCTAAGGCGCACACCTCAAGGGTTTCGAGGAAGACGCGTGCCTTGGCCGCACCTTCCTCACCG
CACCTCGCTTTTTCGAAGCGAGATAGTGGCGGCAGCGTCGAGACGCTCAAAGTAGTGTCTCAACTCTGCCTCGAAGTTGCCCTAGCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATATTGGAGGTGGAGTTGGGGAATTTTCTTGGCAAACATTGAAGATGTTGGTTCTACATGATTGGCCAATGCCAAGGGCTAAGACTTCCTGGAGGACCTTGCT
TATATGCTTTGGTCTAATGCAGGAGCTCAGTGGTAAAAATCAACTCAAACCCATAGTTTACGCAACCTTTGGTGACCCATTCAAAATGCAAAGATCATTCTGTTTAGCTG
GTCAACTGGTGAAGAGGCGAGGATTTTCGACGAATTCCGATAAAATTGTGGCATCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTAT
GCATTTCAGGAGTTCAAATTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGATGAATTTTTAGATAAAGCTAATGCCAGGTCAAGCGAGATTTTGTGGAGAAAGAG
CCCTTTGGCTCCAGTTTCCATATCCATTGATCCTTGGATAGACTTAACATCACCAACGGAAAGAAGAGAACAACAGAGAAAGAATGGAGAGAGGGGAAATAAGAGAGAAG
AAGATGATGAGATTGGGAAAGAAAACGTGGGAGGAACCCCAAAAGCGCCTAAGGCGCACACCTCAAGGGTTTCGAGGAAGACGCGTGCCTTGGCCGCACCTTCCTCACCG
CACCTCGCTTTTTCGAAGCGAGATAGTGGCGGCAGCGTCGAGACGCTCAAAGTAGTGTCTCAACTCTGCCTCGAAGTTGCCCTAGCAGAATAG
Protein sequenceShow/hide protein sequence
MFHIGGGVGEFSWQTLKMLVLHDWPMPRAKTSWRTLLICFGLMQELSGKNQLKPIVYATFGDPFKMQRSFCLAGQLVKRRGFSTNSDKIVASVLFERLPVVIPKIDPVVY
AFQEFKFRWQQQYRRKYPDEFLDKANARSSEILWRKSPLAPVSISIDPWIDLTSPTERREQQRKNGERGNKREEDDEIGKENVGGTPKAPKAHTSRVSRKTRALAAPSSP
HLAFSKRDSGGSVETLKVVSQLCLEVALAE