; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036377 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036377
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:45397191..45398591
RNA-Seq ExpressionLag0036377
SyntenyLag0036377
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3952002.1 hypothetical protein CMV_022403 [Castanea mollissima]4.1e-2241.46Show/hide
Query:  FDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDHNDGA
        FD A+FW+Q H LPL   N T   T+G+ LGTV++V+ +   EC GR LR RV + I +PLCRG  ++ G +    ++ +YER+P FCY+CG+++HN+  
Subjt:  FDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDHNDGA

Query:  C----PQIKSQVKPEKQFGSWMR
        C       ++  K ++Q+G W+R
Subjt:  C----PQIKSQVKPEKQFGSWMR

OMP03234.1 hypothetical protein COLO4_10561 [Corchorus olitorius]3.1e-2238.06Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        EE+  +   FW+Q H LPLG   ++V   +G   G V  ++T      WG+FLR R  + +N+PL RG+ L      KILV+ +YE+LPDFCY CG ++H
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGACPQI----KSQVKPEKQFGSWMRVATPPRKNRFNTSGRGF-EGRTGGRARF
         +  C +     +   K +K++G W+R A  PR N     G G  E RTG    F
Subjt:  NDGACPQI----KSQVKPEKQFGSWMRVATPPRKNRFNTSGRGF-EGRTGGRARF

XP_023915780.1 uncharacterized protein At4g02000-like [Quercus suber]4.1e-2239.68Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        ++  FD+ TFWVQ H+LPL   N T A  +G  LG V+ V+ +   EC GR+LR R+++ I +PLCRG  +N G      VA +YE+L  FCY+CG+++H
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGAC----PQIKSQVKPEKQFGSWM
        ++  C       ++    E+Q+G+W+
Subjt:  NDGAC----PQIKSQVKPEKQFGSWM

XP_030930480.1 uncharacterized protein LOC115956164 [Quercus lobata]1.7e-2343.05Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        +++ FD   FW+Q H LP   +  TV  ++G+ LG V++V+ N    C G FLR RV++ I +PLCRG  +  G      V  KYERLP FCY CGMIDH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGACPQ-IKSQVKP---EKQFGSWMRVATPPR--KNRFNTSGRGFEGRTG
        ++  C Q  +S+  P   EKQFG W+R A P +  K    T+G+  E R G
Subjt:  NDGACPQ-IKSQVKP---EKQFGSWMRVATPPR--KNRFNTSGRGFEGRTG

XP_030941889.1 uncharacterized protein LOC115966887 [Quercus lobata]1.4e-2242.38Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        +++ FD  +FW+Q H LP   +  TV  ++G+ LG V++V+ N    C G FLR RV++ I +PLC G  +  G      V  KYERLP FCY CGMIDH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGACPQ-IKSQVKP---EKQFGSWMRVATPPR--KNRFNTSGRGFEGRTG
        ++  C Q  +S+  P   EKQFG W+R A P +  K    T+G+  E R G
Subjt:  NDGACPQ-IKSQVKP---EKQFGSWMRVATPPR--KNRFNTSGRGFEGRTG

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein1.5e-2238.06Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        EE+  +   FW+Q H LPLG   ++V   +G   G V  ++T      WG+FLR R  + +N+PL RG+ L      KILV+ +YE+LPDFCY CG ++H
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGACPQI----KSQVKPEKQFGSWMRVATPPRKNRFNTSGRGF-EGRTGGRARF
         +  C +     +   K +K++G W+R A  PR N     G G  E RTG    F
Subjt:  NDGACPQI----KSQVKPEKQFGSWMRVATPPRKNRFNTSGRGF-EGRTGGRARF

A0A2N9EVW3 Uncharacterized protein4.0e-2336.24Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        ++ +F   +FWVQ H++P+  R +  A  +G  +G V++V +++ +      +R RV++ +N PLCRG  +N    +K  +A +YERLP+FCY+CG +DH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR
         +  C     Q  S  K E Q+G+W+R +T  PPRK      G    GR
Subjt:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR

A0A2N9F1H4 Uncharacterized protein3.6e-2438.26Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        +E +F   +FWVQ H++PL  R +  A T+G  +G VQ V +++ +      +R RV++ +N PLCRG  +N    +K  +A +YERLP+FCY+CG +DH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR
         +  C     Q +S  K E Q+G+W+R ++  PPRK      G    GR
Subjt:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR

A0A2N9FMM2 Uncharacterized protein8.9e-2333.17Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        ++ +F   +FWVQ H++PL  R +  A T+G  +G VQ V +++ +      +R RV++ +N PLCRG  +N    +K  +A +YERLP+FCY+CG +DH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGRTGGRARFGNRQMTWQWRSDSEDEEEDTLHEDSLTTQ--SSEGSEGSRQPE
         +  C     Q +S  K E Q+G+W+R ++  PPRK      G    GR                  D     E   H D+  T   S + SE  + PE
Subjt:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGRTGGRARFGNRQMTWQWRSDSEDEEEDTLHEDSLTTQ--SSEGSEGSRQPE

A0A2N9HS90 RNase H domain-containing protein5.2e-2336.24Show/hide
Query:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH
        ++ +F   +FWVQ H++P+  R +  A  +G  +G V++V +++ +      +R RV++ +N PLCRG  +N    +K  +A +YERLP+FCY+CG +DH
Subjt:  EEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDH

Query:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR
         +  C     Q  S  K E Q+G+W+R +T  PPRK      G    GR
Subjt:  NDGAC----PQIKSQVKPEKQFGSWMRVAT--PPRKNRFNTSGRGFEGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein8.0e-0831.13Show/hide
Query:  PEEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMID
        P+  +F    FWVQ   +P    N  V   +G  LG V   + N        F R  +   I  PL              L+  +YERL  FC  CGM+ 
Subjt:  PEEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMID

Query:  HNDGAC
        H+ GAC
Subjt:  HNDGAC

AT3G42140.1 zinc ion binding;nucleic acid binding1.4e-0437.7Show/hide
Query:  RFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDHNDGACPQIKSQ
        RFL AR+   I E +   L  N G    +L   +YE+L +FC  CGM+ H+   CP   +Q
Subjt:  RFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDHNDGACPQIKSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAAGAAATGATTTTTGATGAAGCAACTTTCTGGGTTCAATTTCACCATTTACCCCTTGGCCTAAGAAATGACACAGTTGCCTACACTCTGGGGAGCCGCCTCGG
AACAGTCCAGAGAGTTGAGACTAATGAAATGGATGAATGTTGGGGTCGTTTCCTCCGAGCACGAGTTAAGATGAAGATCAACGAACCTCTATGTCGAGGCCTAACTCTTA
ATGACGGACCAACAAGAAAGATTTTGGTAGCAATCAAATATGAGAGGTTACCAGATTTTTGTTACTACTGTGGGATGATCGACCATAACGACGGAGCCTGCCCTCAAATT
AAATCACAAGTAAAGCCGGAAAAGCAGTTTGGGTCATGGATGAGAGTCGCAACTCCTCCGAGAAAAAACCGTTTCAACACTAGCGGTAGAGGATTTGAAGGACGCACAGG
GGGTAGAGCACGGTTTGGAAATAGACAAATGACATGGCAATGGCGATCTGACTCGGAGGACGAGGAAGAGGACACCTTGCATGAAGATTCATTAACTACTCAAAGCTCCG
AAGGTAGTGAGGGCAGCCGACAACCTGAAATCGATCGCCGACCGGCCAAAACACCCGTTACCGATGAAACTCCACTGCAATCAAAGTCGTCGACGAAAATCACGGGCATT
AATGACCCTCTTTCCTTTGATAATGCTAATAATATGGATATTTTCCCTATTGATGCAGATGGAATGAAACAAGGCAAAAATCAAGGAGACATTAATGGCTGCAATGACCA
AAAGCTCAAAAAAATCAGGGACCAAAGTAAAGGAAAAGGAAAATGCGGCGCTGAATCTTTAGGTCAAGGACAACCTGATGGGGTTAAAAGGGAAGATGGGCCCAACTCAA
ATACTATTCAAAATAAGGCCCATTTCATAAACACTCCTATTCAACCCATCGATCTCACGCTTGCAACTGAAAAGAACGCCCAACCAACTTCCAGTCAAGCCCACGACACC
CAAGCAGCCGACCCAACCCATTTGAATGAAGATGATCTAATGGAGGAAGATACTCACAACGTCAAGCTCAGACAGACAAGAAATCCATTCCAAATAAGCCCAAAATCCAG
TGATGGAGGAAAATTCAATCCAGCAAAATCCAAGGATGGAAAAGACAAAGATCGGGTTGTGGATAAAGCTGAGGTTGGTGAGCAAAAAACTTTAAAAAGGTGGAAGAGGA
TGAGCAAGCCGAGAGACTATTTTCAAACCAATCAGTCCACACAACAACCGATGCAAGTTTCTCAGAAGAAGAGGGTCACAGATGATGACAGTTTGGAAATTATCTCTGGC
AAGAAAGTCAAAAATCTAATTCCATTAAACGATGGAATTCTATCGGCGGAGCCTGATCAGCAGGCCCACCGGGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAAGAAATGATTTTTGATGAAGCAACTTTCTGGGTTCAATTTCACCATTTACCCCTTGGCCTAAGAAATGACACAGTTGCCTACACTCTGGGGAGCCGCCTCGG
AACAGTCCAGAGAGTTGAGACTAATGAAATGGATGAATGTTGGGGTCGTTTCCTCCGAGCACGAGTTAAGATGAAGATCAACGAACCTCTATGTCGAGGCCTAACTCTTA
ATGACGGACCAACAAGAAAGATTTTGGTAGCAATCAAATATGAGAGGTTACCAGATTTTTGTTACTACTGTGGGATGATCGACCATAACGACGGAGCCTGCCCTCAAATT
AAATCACAAGTAAAGCCGGAAAAGCAGTTTGGGTCATGGATGAGAGTCGCAACTCCTCCGAGAAAAAACCGTTTCAACACTAGCGGTAGAGGATTTGAAGGACGCACAGG
GGGTAGAGCACGGTTTGGAAATAGACAAATGACATGGCAATGGCGATCTGACTCGGAGGACGAGGAAGAGGACACCTTGCATGAAGATTCATTAACTACTCAAAGCTCCG
AAGGTAGTGAGGGCAGCCGACAACCTGAAATCGATCGCCGACCGGCCAAAACACCCGTTACCGATGAAACTCCACTGCAATCAAAGTCGTCGACGAAAATCACGGGCATT
AATGACCCTCTTTCCTTTGATAATGCTAATAATATGGATATTTTCCCTATTGATGCAGATGGAATGAAACAAGGCAAAAATCAAGGAGACATTAATGGCTGCAATGACCA
AAAGCTCAAAAAAATCAGGGACCAAAGTAAAGGAAAAGGAAAATGCGGCGCTGAATCTTTAGGTCAAGGACAACCTGATGGGGTTAAAAGGGAAGATGGGCCCAACTCAA
ATACTATTCAAAATAAGGCCCATTTCATAAACACTCCTATTCAACCCATCGATCTCACGCTTGCAACTGAAAAGAACGCCCAACCAACTTCCAGTCAAGCCCACGACACC
CAAGCAGCCGACCCAACCCATTTGAATGAAGATGATCTAATGGAGGAAGATACTCACAACGTCAAGCTCAGACAGACAAGAAATCCATTCCAAATAAGCCCAAAATCCAG
TGATGGAGGAAAATTCAATCCAGCAAAATCCAAGGATGGAAAAGACAAAGATCGGGTTGTGGATAAAGCTGAGGTTGGTGAGCAAAAAACTTTAAAAAGGTGGAAGAGGA
TGAGCAAGCCGAGAGACTATTTTCAAACCAATCAGTCCACACAACAACCGATGCAAGTTTCTCAGAAGAAGAGGGTCACAGATGATGACAGTTTGGAAATTATCTCTGGC
AAGAAAGTCAAAAATCTAATTCCATTAAACGATGGAATTCTATCGGCGGAGCCTGATCAGCAGGCCCACCGGGAGCCATGA
Protein sequenceShow/hide protein sequence
MPEEMIFDEATFWVQFHHLPLGLRNDTVAYTLGSRLGTVQRVETNEMDECWGRFLRARVKMKINEPLCRGLTLNDGPTRKILVAIKYERLPDFCYYCGMIDHNDGACPQI
KSQVKPEKQFGSWMRVATPPRKNRFNTSGRGFEGRTGGRARFGNRQMTWQWRSDSEDEEEDTLHEDSLTTQSSEGSEGSRQPEIDRRPAKTPVTDETPLQSKSSTKITGI
NDPLSFDNANNMDIFPIDADGMKQGKNQGDINGCNDQKLKKIRDQSKGKGKCGAESLGQGQPDGVKREDGPNSNTIQNKAHFINTPIQPIDLTLATEKNAQPTSSQAHDT
QAADPTHLNEDDLMEEDTHNVKLRQTRNPFQISPKSSDGGKFNPAKSKDGKDKDRVVDKAEVGEQKTLKRWKRMSKPRDYFQTNQSTQQPMQVSQKKRVTDDDSLEIISG
KKVKNLIPLNDGILSAEPDQQAHREP