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Lag0036387 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036387
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr3:45575021..45575404
RNA-Seq ExpressionLag0036387
SyntenyLag0036387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.3e-0736.19Show/hide
Query:  TLATLASFLPDGRRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYC
        T+ T +      R  Y+S M++++R+N+  Q   LEK+A+WP  K+E+  ARRK V ++L  +P LE  D ++L  IL  ++++   +L +P  +K  +C
Subjt:  TLATLASFLPDGRRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYC

Query:  MLLLG
        M LLG
Subjt:  MLLLG
XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]6.8e-0432.61Show/hide
Query:  RRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYCMLLL
        R S+ + MI+++RS +  Q   + ++ASW K K E    RRK+V+  + ++  L+  D++    +L  D+Q+ D +L++P H +  YC+ LL
Subjt:  RRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYCMLLL
TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859537.4e-0435.87Show/hide
Query:  RRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYCMLLL
        R S     +E+IRS +     +L+ IA WPK K       R +V+++L  +PKL  +D+ KL  IL   ++ I+ +LS+P   K +YC +LL
Subjt:  RRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYCMLLL
A0A6J1DW73 uncharacterized protein LOC1110250186.4e-0836.19Show/hide
Query:  TLATLASFLPDGRRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYC
        T+ T +      R  Y+S M++++R+N+  Q   LEK+A+WP  K+E+  ARRK V ++L  +P LE  D ++L  IL  ++++   +L +P  +K  +C
Subjt:  TLATLASFLPDGRRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTIL--DMQEIDHYLSLPPHWKYDYC

Query:  MLLLG
        M LLG
Subjt:  MLLLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGATGAGGAGATGATAGCAATATTGACAGCGGTATGCACCACACAACAGATACTCACGCTAGCTACATTAGCTAGCTTTCTACCCGACGGAAGAAGATCCTA
TTCATCAAACATGATAGAAATGATTCGATCTAATTTGGGAAAACAAATCGTTGAGCTCGAGAAGATTGCATCGTGGCCTAAGACGAAGGACGAGAGGGCGAAGGCTAGGA
GGAAAAAAGTGATTGAGGAGCTTCTAGCAATGCCTAAATTGGAATTGAAGGATAAGTTGAAGCTTTTTACCATCTTAGATATGCAAGAGATTGACCATTATCTCAGTCTC
CCACCTCATTGGAAGTATGACTATTGCATGCTTCTCTTGGGAACATGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGATGAGGAGATGATAGCAATATTGACAGCGGTATGCACCACACAACAGATACTCACGCTAGCTACATTAGCTAGCTTTCTACCCGACGGAAGAAGATCCTA
TTCATCAAACATGATAGAAATGATTCGATCTAATTTGGGAAAACAAATCGTTGAGCTCGAGAAGATTGCATCGTGGCCTAAGACGAAGGACGAGAGGGCGAAGGCTAGGA
GGAAAAAAGTGATTGAGGAGCTTCTAGCAATGCCTAAATTGGAATTGAAGGATAAGTTGAAGCTTTTTACCATCTTAGATATGCAAGAGATTGACCATTATCTCAGTCTC
CCACCTCATTGGAAGTATGACTATTGCATGCTTCTCTTGGGAACATGCAATTAA
Protein sequenceShow/hide protein sequence
MENDEEMIAILTAVCTTQQILTLATLASFLPDGRRSYSSNMIEMIRSNLGKQIVELEKIASWPKTKDERAKARRKKVIEELLAMPKLELKDKLKLFTILDMQEIDHYLSL
PPHWKYDYCMLLLGTCN