CuGenDBv2

Gene ID	Lag0036390
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	serine/arginine-rich splicing factor 11
Genome location	chr3:45665160..45666684
RNA-Seq Expression	Lag0036390
Synteny	Lag0036390
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

6.3e-35

89.08

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

4.5e-33

87.39

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR   SS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

3.5e-38

94.96

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSSSATS+TSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERS+SHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

1.5e-33

88.24

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR +SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

XP_038879353.1 NKAP family protein [Benincasa hispida]

4.3e-36

89.92

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSSSATSYTSDSSSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSESDYSR++SSSQSEPETS RSKRHK+NDR K+DK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

2.2e-33

87.39

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR   SS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

3.0e-35

89.08

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERSRSHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

A0A6J1C3K8 serine/arginine-rich splicing factor 11

1.7e-38

94.96

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSSSATS+TSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERS+SHHHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

4.1e-32

88.24

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSSSA+ YTSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE S RSKRHKKND TK  K
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
        ERERS+S HHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

A0A6J1I4D4 NKAP family protein isoform X2

1.6e-31

87.39

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK
        MAASSSSA+ YTSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE S RSKRHKKND TKK  
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKE
         RERS+S HHK+RKHKAKE
Subjt:  ERERSRSHHHKKRKHKAKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

1.1e-10

52.89

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+RHKK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKK

Query:  DKERERSRSHHHKKRKHKAKE
         K++ERS+SH HK+ K++ ++
Subjt:  DKERERSRSHHHKKRKHKAKE

AT5G27860.2 unknown protein

1.1e-10

52.89

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+RHKK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKK

Query:  DKERERSRSHHHKKRKHKAKE
         K++ERS+SH HK+ K++ ++
Subjt:  DKERERSRSHHHKKRKHKAKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCGTCTTCTTCTTCTCGACGTCGCCGTCGCCGGAGAAGTCGCCGTGACAAAGATCGTGACGCCCT
TAGGATTCGCAAGAAGAGTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTCTCTTCCTCTGACTCCGAATCCGATTACTCCAGAAGCG
ATAGCTCTTCTCAAAGCGAGCCCGAAACGTCAGTTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCAT
AAAAAGCGTAAACATAAAGCTAAAGAGGTAGATCACTTGCCTGTTTGGGTACTATTTTTCTCTTTGTTTCTGTTAATGCTGTTTTTCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSVRSKRHKKNDRTKKDKERERSRSHHH
KKRKHKAKEVDHLPVWVLFFSLFLLMLFF

Lag0036390 (gene) of Sponge gourd (AG-4) v1 genome