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Lag0036398 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036398
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr3:45766451..45767310
RNA-Seq ExpressionLag0036398
SyntenyLag0036398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033523.1 hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa]5.5e-0432.65Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + S  +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N N + TLGR +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]8.5e-0533.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + SG +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TL R +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]3.2e-0433.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITESNLELD--KSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D +Q + SG +L +     E+ ++    K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TLG  +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITESNLELD--KSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

TYK21863.1 uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]8.5e-0533.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + SG +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TL R +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.1e-0738.78Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIE----TSITESNLELDKSHFLLEWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MVHF + SD+ K+ L++L D DQ ++ G IL +      +I +S +  D   FL +W  E+    +SS K W L SS+  K  N +P+ TLGR II +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIE----TSITESNLELDKSHFLLEWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein4.1e-0533.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + SG +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TL R +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

A0A5A7SST7 PMD domain-containing protein2.7e-0432.65Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + S  +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N N + TLGR +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

A0A5A7U4C3 Uncharacterized protein1.6e-0433.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITESNLELD--KSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D +Q + SG +L +     E+ ++    K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TLG  +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITESNLELD--KSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

A0A5D3BB02 PMD domain-containing protein2.7e-0432.65Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + S  +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N N + TLGR +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

A0A5D3DEA3 Uncharacterized protein4.1e-0533.67Show/hide
Query:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN
        MV+F + SD+ K+ L++L D++Q + SG +L +     E+  + ++ K +F+L  +W  EK+   +S    W L SS+  K  N NP+ TL R +I +
Subjt:  MVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITES--NLELDKSHFLL--EWFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGTGATCAACCCTTAGTTCAGGCAAAATTCAGGCTTATCACTTGCCCATCACATCCTGCCTCGGCTAGTGATAAATCTCTGATTCAAGCGGAATTCAGGTTGAT
CACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCATCCTCTGATTCAGGTGGAATTCGGGAACATGGTGCATTTCATAAAGCTTTCAGATAATGGGAAGAAAGATCTAG
TTGTTCTAATGGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCTAATAGAGACTTCAATTACAGAGTCTAACCTCGAATTGGACAAATCTCATTTTCTTCTGGAA
TGGTTTGTAGAAAAGGCTCAAGGCCAACACTCTTCCACTAAGGTTTGGATTCTACGGTCTTCTTTAGAAGAAAAAAAGTCAAATGTCAATCCAAAACCGACGTTGGGGCG
TCACATCATTGAAAATCAGTTCGAGCCTTTTGTGAAGCCTGGTGTCCTTCAACCAACACCCTCCACACTTCGTCTGGAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGTGATCAACCCTTAGTTCAGGCAAAATTCAGGCTTATCACTTGCCCATCACATCCTGCCTCGGCTAGTGATAAATCTCTGATTCAAGCGGAATTCAGGTTGAT
CACTTGCCCTTCACATCTTGCCTCAGGCAGTGATCATCCTCTGATTCAGGTGGAATTCGGGAACATGGTGCATTTCATAAAGCTTTCAGATAATGGGAAGAAAGATCTAG
TTGTTCTAATGGACAAAGATCAACCTATCAAAAGTGGGACCATTCTTCTAATAGAGACTTCAATTACAGAGTCTAACCTCGAATTGGACAAATCTCATTTTCTTCTGGAA
TGGTTTGTAGAAAAGGCTCAAGGCCAACACTCTTCCACTAAGGTTTGGATTCTACGGTCTTCTTTAGAAGAAAAAAAGTCAAATGTCAATCCAAAACCGACGTTGGGGCG
TCACATCATTGAAAATCAGTTCGAGCCTTTTGTGAAGCCTGGTGTCCTTCAACCAACACCCTCCACACTTCGTCTGGAGAAATAA
Protein sequenceShow/hide protein sequence
MRSDQPLVQAKFRLITCPSHPASASDKSLIQAEFRLITCPSHLASGSDHPLIQVEFGNMVHFIKLSDNGKKDLVVLMDKDQPIKSGTILLIETSITESNLELDKSHFLLE
WFVEKAQGQHSSTKVWILRSSLEEKKSNVNPKPTLGRHIIENQFEPFVKPGVLQPTPSTLRLEK