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Lag0036402 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036402
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr3:45812510..45813089
RNA-Seq ExpressionLag0036402
SyntenyLag0036402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010689380.1 PREDICTED: uncharacterized protein LOC104903090 [Beta vulgaris subsp. vulgaris]1.9e-0560.87Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        AS++++PL++CKKL +  IKSTTV LQLA++S+  P GI+ENVLIK
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

XP_019106514.1 PREDICTED: uncharacterized protein LOC109135623 [Beta vulgaris subsp. vulgaris]1.1e-0562.5Show/hide
Query:  ERASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        E AS+ ++PL++CKKL +  IKSTTV LQLAN+S+  P GI+ENVLIK
Subjt:  ERASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

XP_021634991.1 uncharacterized protein LOC110631460 [Hevea brasiliensis]1.5e-0556.52Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        AS+N++PL++C+KL IG +K TT+ LQL N+S+  P GI+ENVL+K
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

XP_021689332.1 uncharacterized protein LOC110671231 [Hevea brasiliensis]1.1e-0556.52Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        AS+NI+PL++C+KLN+G++  TT+ LQL ++SV  P GI+EN+LIK
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

XP_022157217.1 uncharacterized protein LOC111023979 [Momordica charantia]1.1e-0557.78Show/hide
Query:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        +IN  PL+LC+KLNIG+IK T++ +QL ++S   PYG++ENVLIK
Subjt:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

TrEMBL top hitse value%identityAlignment
A0A151RD37 Uncharacterized protein1.6e-0556.52Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        ASIN++PL++ K+L IG++K T + LQLA++SV  PYG+VE+VL+K
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

A0A151SV10 Retrovirus-related Pol polyprotein from transposon opus1.6e-0556.52Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        ASIN++PL++ K+L IG++K T + LQLA++SV  PYG+VE+VL+K
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

A0A2N9GQN1 Uncharacterized protein1.2e-0539.71Show/hide
Query:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIKEKEILKAFEDPQKTSETMLVGY
        AS+N++P ++  +L +G++K T++ LQLAN+SV  P G+VE+VLI E+E +   ++P ++ +  L+ Y
Subjt:  ASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIKEKEILKAFEDPQKTSETMLVGY

A0A6J1DTZ8 uncharacterized protein LOC1110239795.4e-0657.78Show/hide
Query:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        +IN  PL+LC+KLNIG+IK T++ +QL ++S   PYG++ENVLIK
Subjt:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

A0A6P9F5T6 uncharacterized protein LOC1089899769.2e-0655.56Show/hide
Query:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK
        SIN++PL++C+KL +G++K TT+ LQLANQS+  P+ I+E+VL+K
Subjt:  SINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATCAAGAAGAAAAAGGAAAAGCAGATGGAGACTGTATACCTCGCATCGACATGCAGTGCTCGTGCCCAATAGAAAGGGCTAGCATAAATATCATTCCATTAGC
ATTGTGCAAAAAGCTAAATATAGGACAGATAAAATCTACTACTGTTAGGCTACAGTTGGCTAACCAGTCTGTGGTTAGTCCATATGGGATTGTTGAGAATGTGCTCATTA
AAGAAAAGGAGATTCTAAAGGCTTTTGAGGACCCTCAGAAAACCTCAGAGACCATGTTGGTGGGTTATAGGAGAGGTGCTAGGAAGAGCACCAGTGATGGAACACTGGCC
AGTAGACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCATCAAGAAGAAAAAGGAAAAGCAGATGGAGACTGTATACCTCGCATCGACATGCAGTGCTCGTGCCCAATAGAAAGGGCTAGCATAAATATCATTCCATTAGC
ATTGTGCAAAAAGCTAAATATAGGACAGATAAAATCTACTACTGTTAGGCTACAGTTGGCTAACCAGTCTGTGGTTAGTCCATATGGGATTGTTGAGAATGTGCTCATTA
AAGAAAAGGAGATTCTAAAGGCTTTTGAGGACCCTCAGAAAACCTCAGAGACCATGTTGGTGGGTTATAGGAGAGGTGCTAGGAAGAGCACCAGTGATGGAACACTGGCC
AGTAGACCACCTTGA
Protein sequenceShow/hide protein sequence
MTHQEEKGKADGDCIPRIDMQCSCPIERASINIIPLALCKKLNIGQIKSTTVRLQLANQSVVSPYGIVENVLIKEKEILKAFEDPQKTSETMLVGYRRGARKSTSDGTLA
SRPP