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Lag0036406 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036406
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RGLG2
Genome locationchr3:45971995..45973763
RNA-Seq ExpressionLag0036406
SyntenyLag0036406
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578679.1 E3 ubiquitin-protein ligase RGLG2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0956.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTSPQECY NVDNGRRLDRRYSRIADNY +L E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

KAG7016218.1 E3 ubiquitin-protein ligase RGLG2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0956.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTSPQECY NVDNGRRLDRRYSRIADNY +L E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

XP_004142779.1 E3 ubiquitin-protein ligase RGLG2 [Cucumis sativus]3.5e-0956.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTS QECY NVDNGRRLDRRYSRIADNY SL E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

XP_022938742.1 E3 ubiquitin-protein ligase RGLG2 [Cucurbita moschata]1.2e-0956.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTSPQECY NVDNGRRLDRRYSRIADNY +L E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

XP_023551215.1 E3 ubiquitin-protein ligase RGLG2 [Cucurbita pepo subsp. pepo]2.7e-0955.7Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTSPQ+CY NVDNGRRLDRRYSRIADNY +L E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

TrEMBL top hitse value%identityAlignment
A0A0A0KUC6 RING-type domain-containing protein1.7e-0956.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTS QECY NVDNGRRLDRRYSRIADNY SL E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

A0A1S3C8B4 E3 ubiquitin-protein ligase RGLG23.8e-0955.7Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTS QECY NVDNGRRLDR+YSRIADNY SL E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

A0A5A7T2K5 E3 ubiquitin-protein ligase RGLG23.8e-0955.7Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTS QECY NVDNGRRLDR+YSRIADNY SL E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

A0A5D3CDJ4 E3 ubiquitin-protein ligase RGLG23.8e-0955.7Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTS QECY NVDNGRRLDR+YSRIADNY SL E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

A0A6J1FEY1 E3 ubiquitin-protein ligase RGLG25.8e-1056.96Show/hide
Query:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT
        Y   SYGHETPS            YTSPQECY NVDNGRRLDRRYSRIADNY +L E       A LES+  +   DFT
Subjt:  YCSQSYGHETPS------------YTSPQECYRNVDNGRRLDRRYSRIADNYISLNE----FILAQLESTLFV--YDFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACGTTGAAAAAAGGCGTGTTTGGAAGGCTAGGTATTTCACTGGACTTACGATGTCGGGCAATGCCGAACATTGTATGGGTGGAAGATCTGAGCCATTGAAGGT
CGTAGGTCGTAGATCTGAAGTCATCGAGGTCGTGGGTTGTTGTCATGGGAGCAGATCTGAAGCTTTAGGCTGCAGAGATTGGATAGTTAATGGTAGGAGATTGGATAGAA
GATATTGTTCTCAATCATATGGACATGAAACCCCAAGTTATACATCTCCCCAAGAGTGTTATCGGAACGTTGATAATGGCAGGAGACTAGATAGAAGATACTCAAGGATT
GCTGATAATTACATTTCTTTAAATGAGTTTATCCTTGCACAATTGGAGAGTACTCTGTTTGTTTATGATTTCACTATCAAGGTTTTTCTTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGACGTTGAAAAAAGGCGTGTTTGGAAGGCTAGGTATTTCACTGGACTTACGATGTCGGGCAATGCCGAACATTGTATGGGTGGAAGATCTGAGCCATTGAAGGT
CGTAGGTCGTAGATCTGAAGTCATCGAGGTCGTGGGTTGTTGTCATGGGAGCAGATCTGAAGCTTTAGGCTGCAGAGATTGGATAGTTAATGGTAGGAGATTGGATAGAA
GATATTGTTCTCAATCATATGGACATGAAACCCCAAGTTATACATCTCCCCAAGAGTGTTATCGGAACGTTGATAATGGCAGGAGACTAGATAGAAGATACTCAAGGATT
GCTGATAATTACATTTCTTTAAATGAGTTTATCCTTGCACAATTGGAGAGTACTCTGTTTGTTTATGATTTCACTATCAAGGTTTTTCTTGGATAA
Protein sequenceShow/hide protein sequence
MSDVEKRRVWKARYFTGLTMSGNAEHCMGGRSEPLKVVGRRSEVIEVVGCCHGSRSEALGCRDWIVNGRRLDRRYCSQSYGHETPSYTSPQECYRNVDNGRRLDRRYSRI
ADNYISLNEFILAQLESTLFVYDFTIKVFLG