; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036424 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036424
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:46261296..46262091
RNA-Seq ExpressionLag0036424
SyntenyLag0036424
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596619.1 E3 ubiquitin-protein ligase PUB23, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2958.12Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S         S   HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+LKS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

KAG7028156.1 E3 ubiquitin-protein ligase PUB23, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-2958.12Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S S           HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+LKS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

XP_008442921.1 PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo]1.2e-2858.87Show/hide
Query:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS
        S +++SE NRR ++ AGAPEFL S+I  SDS+ SHEALSTLHNLRLSDS  K+L + + E  +SLT  M  QQGT+E SR YAVL+LKS+VEVAD ++LS
Subjt:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS

Query:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR
        FLK +LFV+IV +LKD+++S +  KAAL +LI   P G  R
Subjt:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR

XP_023005635.1 E3 ubiquitin-protein ligase PUB22-like [Cucurbita maxima]6.9e-2958.12Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S S           HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+LKS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

XP_023540239.1 E3 ubiquitin-protein ligase PUB22-like [Cucurbita pepo subsp. pepo]5.3e-2958.12Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S         S   HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+LKS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

TrEMBL top hitse value%identityAlignment
A0A1S3B6U7 RING-type E3 ubiquitin transferase5.7e-2958.87Show/hide
Query:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS
        S +++SE NRR ++ AGAPEFL S+I  SDS+ SHEALSTLHNLRLSDS  K+L + + E  +SLT  M  QQGT+E SR YAVL+LKS+VEVAD ++LS
Subjt:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS

Query:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR
        FLK +LFV+IV +LKD+++S +  KAAL +LI   P G  R
Subjt:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR

A0A5D3DNW0 RING-type E3 ubiquitin transferase5.7e-2958.87Show/hide
Query:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS
        S +++SE NRR ++ AGAPEFL S+I  SDS+ SHEALSTLHNLRLSDS  K+L + + E  +SLT  M  QQGT+E SR YAVL+LKS+VEVAD ++LS
Subjt:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVM--QQGTYE-SRAYAVLVLKSMVEVADSVELS

Query:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR
        FLK +LFV+IV +LKD+++S +  KAAL +LI   P G  R
Subjt:  FLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGR

A0A6A2ZLY5 RING-type E3 ubiquitin transferase2.2e-2551.85Show/hide
Query:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLK
        S AS++  N+R ++S+GA EFLAS+++  DS  + EAL+TL+NL+LS++ LK L   NG+F  SLTRVMQ G+YE RAYAV VLKSM+E+AD ++L  L+
Subjt:  SAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLK

Query:  SDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTG
         +LFVE+  VL+D+  S ++ KA LK+L+   P G
Subjt:  SDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTG

A0A6J1GKE4 RING-type E3 ubiquitin transferase7.4e-2957.59Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S         S   HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASS--------DSAVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+ KS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

A0A6J1KXX6 RING-type E3 ubiquitin transferase3.3e-2958.12Show/hide
Query:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS
        P P PP   P+     SSSSS P      +      S A++SE+NRR ++SAGAPEFLAS+I +S S           HEALSTLHNLRLSDSKLK+LT 
Subjt:  PLPSPPSPSPR-----SSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDS--------AVSHEALSTLHNLRLSDSKLKTLTS

Query:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
         N E FDSLT+VM+QGTYESRAYA L+LKS++EVAD +EL+FLKS+LFVEIVG+LKDQ TS +SLKAAL +LI A     GR   K V  G
Subjt:  NNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

SwissProt top hitse value%identityAlignment
Q84TG3 E3 ubiquitin-protein ligase PUB233.0e-1940.94Show/hide
Query:  SDSEANRRSLQSAGAPEFLASLIA--SSDSAVSHEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFL
        S++  N+R L++AG PEFLA++++  S + +++ EAL+ L++L  S++ LK L +N  +     SLT++MQ+G YESR YA L+LK+++EVAD ++   L
Subjt:  SDSEANRRSLQSAGAPEFLASLIA--SSDSAVSHEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFL

Query:  KSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDGV
        K ++F E+V +L D+  S K+ KAA+ +L+   P   GR   K V  GV
Subjt:  KSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDGV

Q9SF15 E3 ubiquitin-protein ligase PUB246.1e-0431.71Show/hide
Query:  EALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTS
        E+L  LH + +  +  KT+   N    +SLT V+ Q  + S+AY +++L+++ E   S  +  L  ++F  I+G LKD   S
Subjt:  EALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTS

Q9SVC6 E3 ubiquitin-protein ligase PUB222.6e-1534.46Show/hide
Query:  SDSEANRRSLQSAGAPEFLASLIASS-----------------------------DSAVS--HEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQ
        S++  N+R L++A  PEFLA+++++S                             DS+ S   EALS L++L  S++ LK+L +N        +LT++MQ
Subjt:  SDSEANRRSLQSAGAPEFLASLIASS-----------------------------DSAVS--HEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQ

Query:  QGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
        +G YESRAYA L+LK ++EVAD +++  L+ +LF E++ +L DQ  S K+ ++A+++L++  P   GR   K V  G
Subjt:  QGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG

Arabidopsis top hitse value%identityAlignment
AT2G35930.1 plant U-box 232.1e-2040.94Show/hide
Query:  SDSEANRRSLQSAGAPEFLASLIA--SSDSAVSHEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFL
        S++  N+R L++AG PEFLA++++  S + +++ EAL+ L++L  S++ LK L +N  +     SLT++MQ+G YESR YA L+LK+++EVAD ++   L
Subjt:  SDSEANRRSLQSAGAPEFLASLIA--SSDSAVSHEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFL

Query:  KSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDGV
        K ++F E+V +L D+  S K+ KAA+ +L+   P   GR   K V  GV
Subjt:  KSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDGV

AT3G11840.1 plant U-box 244.3e-0531.71Show/hide
Query:  EALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTS
        E+L  LH + +  +  KT+   N    +SLT V+ Q  + S+AY +++L+++ E   S  +  L  ++F  I+G LKD   S
Subjt:  EALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTS

AT3G52450.1 plant U-box 221.9e-1634.46Show/hide
Query:  SDSEANRRSLQSAGAPEFLASLIASS-----------------------------DSAVS--HEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQ
        S++  N+R L++A  PEFLA+++++S                             DS+ S   EALS L++L  S++ LK+L +N        +LT++MQ
Subjt:  SDSEANRRSLQSAGAPEFLASLIASS-----------------------------DSAVS--HEALSTLHNLRLSDSKLKTLTSN--NGEFFDSLTRVMQ

Query:  QGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG
        +G YESRAYA L+LK ++EVAD +++  L+ +LF E++ +L DQ  S K+ ++A+++L++  P   GR   K V  G
Subjt:  QGTYESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCAGCGCTTCCCCACTCCCAAGCCCCCCGTCACCAAGCCCCAGATCCTCAAGCTCATCTCCTCCGCCTCCTCCTCCTCCTCCCCTTCCTCCCACATCTCCTGC
ATCCGCCGCCTCCGACTCCGAAGCCAACCGCCGCTCCCTCCAGTCCGCCGGCGCCCCCGAGTTTCTCGCCTCTCTCATTGCCTCCTCTGACTCCGCCGTCTCCCACGAAG
CCCTCTCCACTCTCCACAACCTCCGCCTCTCCGACTCCAAGCTCAAGACCCTCACCTCCAATAACGGGGAGTTTTTCGATTCCTTGACCAGAGTCATGCAGCAGGGGACC
TACGAGTCGAGAGCCTACGCTGTTCTTGTTCTCAAGTCCATGGTCGAAGTCGCCGATTCGGTTGAGCTGTCGTTCTTGAAATCCGACTTGTTCGTGGAGATCGTCGGGGT
TCTGAAGGACCAGACGACGTCCCCGAAGAGTTTGAAGGCGGCATTGAAGGTTCTGATCGTGGCCTATCCTACTGGCGGCGGCCGCGGCGGAGAGAAGGGTGTGCGAGATG
GCGTTGACGGTGGTGGATTTGCTGTGTGGGTGTGCGGACGGGCGGGCGGCGCTGCTGGGCACCGGAGAAGAAGGAGAAGGGAAAGGGAAGAGAAAGAGAAGAAAAGATTA
AAAAAAAAATTGTCGCCGGCCGCCGGCGCCGGCAGACTGTCTCCGGTGCCGGCAACGGACGGCGACCTTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCAGCGCTTCCCCACTCCCAAGCCCCCCGTCACCAAGCCCCAGATCCTCAAGCTCATCTCCTCCGCCTCCTCCTCCTCCTCCCCTTCCTCCCACATCTCCTGC
ATCCGCCGCCTCCGACTCCGAAGCCAACCGCCGCTCCCTCCAGTCCGCCGGCGCCCCCGAGTTTCTCGCCTCTCTCATTGCCTCCTCTGACTCCGCCGTCTCCCACGAAG
CCCTCTCCACTCTCCACAACCTCCGCCTCTCCGACTCCAAGCTCAAGACCCTCACCTCCAATAACGGGGAGTTTTTCGATTCCTTGACCAGAGTCATGCAGCAGGGGACC
TACGAGTCGAGAGCCTACGCTGTTCTTGTTCTCAAGTCCATGGTCGAAGTCGCCGATTCGGTTGAGCTGTCGTTCTTGAAATCCGACTTGTTCGTGGAGATCGTCGGGGT
TCTGAAGGACCAGACGACGTCCCCGAAGAGTTTGAAGGCGGCATTGAAGGTTCTGATCGTGGCCTATCCTACTGGCGGCGGCCGCGGCGGAGAGAAGGGTGTGCGAGATG
GCGTTGACGGTGGTGGATTTGCTGTGTGGGTGTGCGGACGGGCGGGCGGCGCTGCTGGGCACCGGAGAAGAAGGAGAAGGGAAAGGGAAGAGAAAGAGAAGAAAAGATTA
AAAAAAAAATTGTCGCCGGCCGCCGGCGCCGGCAGACTGTCTCCGGTGCCGGCAACGGACGGCGACCTTTGGTAG
Protein sequenceShow/hide protein sequence
MESSASPLPSPPSPSPRSSSSSPPPPPPPPLPPTSPASAASDSEANRRSLQSAGAPEFLASLIASSDSAVSHEALSTLHNLRLSDSKLKTLTSNNGEFFDSLTRVMQQGT
YESRAYAVLVLKSMVEVADSVELSFLKSDLFVEIVGVLKDQTTSPKSLKAALKVLIVAYPTGGGRGGEKGVRDGVDGGGFAVWVCGRAGGAAGHRRRRRREREEKEKKRL
KKKLSPAAGAGRLSPVPATDGDLW