; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036434 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036434
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGATA transcription factor 16-like
Genome locationchr3:46439509..46442035
RNA-Seq ExpressionLag0036434
SyntenyLag0036434
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135614.1 GATA transcription factor 16-like isoform X3 [Momordica charantia]1.6e-3462.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

XP_022135615.1 GATA transcription factor 16-like isoform X4 [Momordica charantia]1.6e-3462.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

XP_022989484.1 GATA transcription factor 16-like [Cucurbita maxima]1.1e-3568.97Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHNDASTVSASSSCSGTTA--------GGRDREEDLGECASLRMRLMMAFG
        KCC+ CNTT TPLWRGGPAGPKSLCNACGIRFRKRRIS   G  RKR+R H   S+ ++SSS SGTTA        G  D EEDLGEC SLRMR+MM F 
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHNDASTVSASSSCSGTTA--------GGRDREEDLGECASLRMRLMMAFG

Query:  EEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        EE VVVVQN+ SSV+KQ      KLG EEEQAAV LMALSCGSVF
Subjt:  EEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

XP_023530140.1 GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]9.6e-3561.45Show/hide
Query:  QGLLPTDDA--AKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHND----ASTVSASSSCSGTTA-----------GGR
        +GLLP         KCC+ CNTT TPLWRGGPAGPKSLCNACGIRFRKRRIS   G  RK++R H+     A + + SSS +GTTA           G  
Subjt:  QGLLPTDDA--AKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHND----ASTVSASSSCSGTTA-----------GGR

Query:  DREEDLGECASLRMRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        D EEDLGEC SLRMR+MM F EE VVVVQN+ SSV+KQ      KLG EEEQAAV LMALSCGSVF
Subjt:  DREEDLGECASLRMRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

XP_038880207.1 GATA transcription factor 17-like [Benincasa hispida]3.0e-4469.08Show/hide
Query:  AKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC----DRKRDRLHNDAS----TVSASSSCSGTT------AGGRDREEDLGECASLR
        A  KCC+ C TT TPLWRGGP GPKSLCNACGIRFRKRRIS +G     DRKR+R+HN+ S    TVSA++S +GTT      +G  D +E+LGEC SL 
Subjt:  AKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC----DRKRDRLHNDAS----TVSASSSCSGTT------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV
        MRLMMA  EE V+VVQNLPSSVKKQR QR RKLGEEE+QAAVSLMALSCGSV
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV

TrEMBL top hitse value%identityAlignment
A0A6J1C1I3 GATA transcription factor 16-like isoform X47.9e-3562.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

A0A6J1C1Y1 GATA transcription factor 16-like isoform X37.9e-3562.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

A0A6J1C373 GATA transcription factor 17-like isoform X17.9e-3562.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

A0A6J1C5A4 GATA transcription factor 17-like isoform X27.9e-3562.09Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR
        K C+ C TT TPLWRGGPAGPKSLCNACGIRFRKRR+S +    GCDRKR++ H    +  + +SA++S S T          A G + EEDLGEC SLR
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL----GCDRKRDRLH----NDASTVSASSSCSGTT---------AGGRDREEDLGECASLR

Query:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        MRLMMA GEE VVV QN    + KQR    RKLG EEEQAAVSLMALSCGSVF
Subjt:  MRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

A0A6J1JPG4 GATA transcription factor 16-like5.5e-3668.97Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHNDASTVSASSSCSGTTA--------GGRDREEDLGECASLRMRLMMAFG
        KCC+ CNTT TPLWRGGPAGPKSLCNACGIRFRKRRIS   G  RKR+R H   S+ ++SSS SGTTA        G  D EEDLGEC SLRMR+MM F 
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISA-LGCDRKRDRLHNDASTVSASSSCSGTTA--------GGRDREEDLGECASLRMRLMMAFG

Query:  EEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
        EE VVVVQN+ SSV+KQ      KLG EEEQAAV LMALSCGSVF
Subjt:  EEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 212.2e-1070.73Show/hide
Query:  IKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL
        I+ C  CNTT TPLWR GP GPKSLCNACGIR RK R +A+
Subjt:  IKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISAL

Q8LC59 GATA transcription factor 238.2e-1337.32Show/hide
Query:  DDAAKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRK-RRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEE
        ++   I+CC  C TT TP+WRGGP GPKSLCNACGIR RK RR   LG    R      +  ++  SS  G                             
Subjt:  DDAAKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRK-RRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEE

Query:  GVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV
        GV V             ++RR L +EEEQAA+ L+ LSC SV
Subjt:  GVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV

Q8LG10 GATA transcription factor 152.0e-1444.85Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALG--CDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV
        K C  C T+ TPLWRGGPAGPKSLCNACGIR RK+R + +    + K+ + HN                    R    G+  SL+ RL M  G E  V++
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALG--CDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV

Query:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGS
        Q           QRR KLG EEEQAAV LMALS  S
Subjt:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGS

Q9FJ10 GATA transcription factor 163.0e-1544.93Show/hide
Query:  KIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV
        K K C  C T+ TPLWRGGP GPKSLCNACGIR RK+R      ++K  +                +++GG +R+   GE  SL+  LM    + G+   
Subjt:  KIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV

Query:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
            S+V+KQ    R+KLG EEEQAAV LMALS GSV+
Subjt:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

Q9LIB5 GATA transcription factor 176.1e-1641.06Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC---DRKRDRLHNDASTVSASS------SCSGTTAGGRDREEDLGECASLRM------R
        + C+ C T  TPLWRGGPAGPKSLCNACGI+ RK+R +ALG    ++K++R  N  + ++           +    G  D ++D   C + R       +
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC---DRKRDRLHNDASTVSASS------SCSGTTAGGRDREEDLGECASLRM------R

Query:  LMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
         +  F + G  V     S+V+K+R    RKLG EEE+AAV LMALSC SV+
Subjt:  LMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 151.4e-1544.85Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALG--CDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV
        K C  C T+ TPLWRGGPAGPKSLCNACGIR RK+R + +    + K+ + HN                    R    G+  SL+ RL M  G E  V++
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALG--CDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV

Query:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGS
        Q           QRR KLG EEEQAAV LMALS  S
Subjt:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGS

AT3G16870.1 GATA transcription factor 174.3e-1741.06Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC---DRKRDRLHNDASTVSASS------SCSGTTAGGRDREEDLGECASLRM------R
        + C+ C T  TPLWRGGPAGPKSLCNACGI+ RK+R +ALG    ++K++R  N  + ++           +    G  D ++D   C + R       +
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGC---DRKRDRLHNDASTVSASS------SCSGTTAGGRDREEDLGECASLRM------R

Query:  LMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
         +  F + G  V     S+V+K+R    RKLG EEE+AAV LMALSC SV+
Subjt:  LMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF

AT4G16141.1 GATA type zinc finger transcription factor family protein2.4e-1536.59Show/hide
Query:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVV---
        K C+ C T+ TPLWRGGPAGPKSLCNACGI+ RK+R +ALG  +   ++ + ++      S +  T  G      + +C    +++  A GE G V    
Subjt:  KCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVV---

Query:  ---VQNLPSSVKKQRCQRR-------------------------RKLGEEEEQAAVSLMALSCG
            +N  SS   ++  +R                         RKLG EEE+AAV LMALSCG
Subjt:  ---VQNLPSSVKKQRCQRR-------------------------RKLGEEEEQAAVSLMALSCG

AT5G26930.1 GATA transcription factor 235.8e-1437.32Show/hide
Query:  DDAAKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRK-RRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEE
        ++   I+CC  C TT TP+WRGGP GPKSLCNACGIR RK RR   LG    R      +  ++  SS  G                             
Subjt:  DDAAKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRK-RRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEE

Query:  GVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV
        GV V             ++RR L +EEEQAA+ L+ LSC SV
Subjt:  GVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSV

AT5G49300.1 GATA transcription factor 162.1e-1644.93Show/hide
Query:  KIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV
        K K C  C T+ TPLWRGGP GPKSLCNACGIR RK+R      ++K  +                +++GG +R+   GE  SL+  LM    + G+   
Subjt:  KIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRKRRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVV

Query:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF
            S+V+KQ    R+KLG EEEQAAV LMALS GSV+
Subjt:  QNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGATATTTAAAACCGTTCTTCATTACTGAAGAAAGGATCTCGAATTGTATTCTCTCCTCTTGCTCTCCTCTTGCTCTCCTCCTTCAACTTTCTGACTTAAGCAT
CGAAGGCGGTGTGACAAGTACCACACTGGCGTGCAGGTTTTTCTATCTTGCAGGTCACATCTTCTTGGTGGCATGTGAAGGTCAGGGACTATTGCCCACCGATGACGCCG
CCAAGATCAAATGCTGCCTTCATTGTAACACCACCACCACTCCTCTCTGGCGTGGAGGCCCCGCTGGACCCAAGTCACTGTGTAATGCATGTGGGATCAGGTTTAGGAAG
AGAAGAATATCCGCCTTAGGATGTGACAGGAAGAGAGACAGACTTCATAACGATGCCTCCACCGTCTCCGCCTCCTCTTCATGTAGTGGGACGACGGCCGGCGGCCGAGA
CAGGGAGGAGGATTTGGGGGAATGTGCTTCGTTGAGGATGAGGCTGATGATGGCATTTGGGGAGGAGGGGGTGGTGGTGGTGCAGAATTTACCGTCGTCGGTTAAGAAAC
AGCGGTGCCAGCGGCGGAGGAAGCTCGGGGAGGAGGAGGAGCAGGCGGCGGTGTCGTTGATGGCGCTGTCGTGTGGCTCTGTGTTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGATATTTAAAACCGTTCTTCATTACTGAAGAAAGGATCTCGAATTGTATTCTCTCCTCTTGCTCTCCTCTTGCTCTCCTCCTTCAACTTTCTGACTTAAGCAT
CGAAGGCGGTGTGACAAGTACCACACTGGCGTGCAGGTTTTTCTATCTTGCAGGTCACATCTTCTTGGTGGCATGTGAAGGTCAGGGACTATTGCCCACCGATGACGCCG
CCAAGATCAAATGCTGCCTTCATTGTAACACCACCACCACTCCTCTCTGGCGTGGAGGCCCCGCTGGACCCAAGTCACTGTGTAATGCATGTGGGATCAGGTTTAGGAAG
AGAAGAATATCCGCCTTAGGATGTGACAGGAAGAGAGACAGACTTCATAACGATGCCTCCACCGTCTCCGCCTCCTCTTCATGTAGTGGGACGACGGCCGGCGGCCGAGA
CAGGGAGGAGGATTTGGGGGAATGTGCTTCGTTGAGGATGAGGCTGATGATGGCATTTGGGGAGGAGGGGGTGGTGGTGGTGCAGAATTTACCGTCGTCGGTTAAGAAAC
AGCGGTGCCAGCGGCGGAGGAAGCTCGGGGAGGAGGAGGAGCAGGCGGCGGTGTCGTTGATGGCGCTGTCGTGTGGCTCTGTGTTTGGCTGA
Protein sequenceShow/hide protein sequence
MSRYLKPFFITEERISNCILSSCSPLALLLQLSDLSIEGGVTSTTLACRFFYLAGHIFLVACEGQGLLPTDDAAKIKCCLHCNTTTTPLWRGGPAGPKSLCNACGIRFRK
RRISALGCDRKRDRLHNDASTVSASSSCSGTTAGGRDREEDLGECASLRMRLMMAFGEEGVVVVQNLPSSVKKQRCQRRRKLGEEEEQAAVSLMALSCGSVFG