; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036435 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036435
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionExonuclease domain-containing protein
Genome locationchr3:46449797..46451084
RNA-Seq ExpressionLag0036435
SyntenyLag0036435
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590475.1 Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.5e-15384.4Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFRIYNLEGGQ+KRWTRKS++TKAGRKAKT+PS KPS+IRNEILEESVSTSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K+ TQKLQ C+IQ+TIVK+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QF+KSRQKPDG+VL +AHN RTFDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKITKISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKKN
        TFDLKLGI  L+ERSFT SDLINKKKN
Subjt:  TFDLKLGISYLVERSFTASDLINKKKN

XP_022961373.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata]1.3e-15284.1Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFR YNLEGGQ+KRWTRKS++TKAGRKAKT+PS KPS+IRNEILEESVSTSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K+ TQKLQ C+IQ+TIVK+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QF+KSRQKPDG+VL +AHN RTFDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKITKISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKKN
        TFDLKLGI  L+ERSFT SDLINKKKN
Subjt:  TFDLKLGISYLVERSFTASDLINKKKN

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]1.7e-15284.66Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFRIYNLEGGQ+KRWTRKS+TTKAGRKAKTNPS KPS+IRNEILEESVSTSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K  TQKLQ C+IQ+TI+K+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QFVKSRQKPDG+VL +AHN R FDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKITKISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKK
        TFDLKLGI  L+ERSFT SDLINKKK
Subjt:  TFDLKLGISYLVERSFTASDLINKKK

XP_023515555.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]1.7e-15283.79Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFRIYNLEGGQNKRWTRKS++TKAGRKAKT+PS KPS+IRNEILEESVSTSCT+SINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K+ TQKLQ C+IQ+TI K+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QF+KSRQKPDG+VL +AHN RTFDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKI KISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKKN
        TFDLKLGI  L+ERSFT SDLINKKKN
Subjt:  TFDLKLGISYLVERSFTASDLINKKKN

XP_038878496.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]1.3e-15284.8Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILR PKFGV TLANLWRENFHPLNRN  HSSW+ QLGFRIYNLEGGQNKRW RKS+TTKAGRKAK NPS KP++IRNEILEES+STSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        KSETQKLQYCDIQQ I+KNK+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI NS +H ITNHMVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSR--QKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        QFV+SR  QKPDG+VL +AHN RTFDVPFLLKEFSRCS DIP NW FFD++ LAR LMKSSDSKITKISLQALREYYDI LVGSAHRAMSDV SLS ILQ
Subjt:  QFVKSR--QKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDLINKKKN
        RLTF+LKLGIS L+ERSFTASDLINKKKN
Subjt:  RLTFDLKLGISYLVERSFTASDLINKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein1.1e-13978.22Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI R PK+GV  LANLWRENFHPLNRN+GH+ WY QL FRIYNLEGG+NKRWTRKS+TTKAG KAKTNPS KP++IRNEIL+ES+  SCTV+INK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        KSETQKLQYCDIQ TI+K+K+FA  VTV+ FDIETTG SR+ DRIVEIAFQDLSGGENSTFQTLINP+CYITNS +H I+N MV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QFVKSRQKP G+VL +AHN RTFDVPFLL EFSR SVDIP NWLFFDTM LAR LMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKK
        TFDLKL IS LVER+FT  DLINKKK
Subjt:  TFDLKLGISYLVERSFTASDLINKKK

A0A0N9LRH7 Exonuclease DPD12.4e-13978.22Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI R PK+GV  LANLWRENFHPLNRN+GH+ WY QL FRIYNLEGG+NKRWTRKS+TTKAG KAKTNPS KP++IRNEIL+ESV  SCTV+INK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        KSETQKLQYCDIQ TI+K+K+FA  VTV+ FDIETTG SR+ DRIVEIAFQDLSGGENSTFQTLINP+CYITNS +H I+N MV  P VP M+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QFVKSRQKP G+VL +AHN RTFDVPFLL EFSR SVDIP NWLFFDTM LAR LMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKK
        TFDLKL IS LVER+FT  DLINKKK
Subjt:  TFDLKLGISYLVERSFTASDLINKKK

A0A6J1C1V8 exonuclease DPD1, chloroplastic/mitochondrial6.0e-15183.49Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGVHTLAN WR NFHPLNRNYGHSSWY QL FRIYNLEGGQNKRWTRKS+TTKAGRK K NPS KPSDIRNEILE SVSTSCTVSINKTE
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        KSETQKLQYCDIQQT  K K+   PVTV+ FDIETTG SR KDRIVEIAFQDLSGGENSTFQTLINPECYI NS +H IT+ MVSRP+VPRMK+LIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QFV SRQKPDG++L +AHN RTFDVPFLL EFSRCS DIPQ+WLF D M LAR LM SSDSK++KISLQALREYY IPLVGSAHRAMSDV SLS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKKN
        TFDLKL I  L+ERSFTASDLI K K+
Subjt:  TFDLKLGISYLVERSFTASDLINKKKN

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial6.4e-15384.1Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFR YNLEGGQ+KRWTRKS++TKAGRKAKT+PS KPS+IRNEILEESVSTSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K+ TQKLQ C+IQ+TIVK+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QF+KSRQKPDG+VL +AHN RTFDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKITKISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKKN
        TFDLKLGI  L+ERSFT SDLINKKKN
Subjt:  TFDLKLGISYLVERSFTASDLINKKKN

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial8.4e-15384.66Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MCFSILRVPKFGV TLANLWRENFHPLNRNYGHSSWY QLGFRIYNLEGGQ+KRWTRKS+TTKAGRKAKTNPS KPS+IRNEILEESVSTSCTVSINK+E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL
        K  TQKLQ C+IQ+TI+K+K+ A PVTV+ FDIETTG SR+ DRIVEIA QDLSGGENSTFQTLINPECYI N+ +H IT+ MVSRP+VPRMKELIPILL
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILL

Query:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        QFVKSRQKPDG+VL +AHN R FDVPFLLKEFSRCSVDIP NWLFFD + LAR LMKS+DSKITKISLQALREYY+IPLVGSAHRAMSDV +LS ILQRL
Subjt:  QFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Query:  TFDLKLGISYLVERSFTASDLINKKK
        TFDLKLGI  L+ERSFT SDLINKKK
Subjt:  TFDLKLGISYLVERSFTASDLINKKK

SwissProt top hitse value%identityAlignment
Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial1.1e-6444.27Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  +++G    RW R++V+T       T  SR  S+ ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL
        +S T+   + ++QQ + ++KD +  +TV++ D+ETTGL R  +RI+EIA QD++GG  STFQTL+NP    ITN+++H I N MV RPEVPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL

Query:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        L++V+SRQKP G+V+ +AHNG++FD  FL+ EF+RCS +IP NWL  D++ LAR  MKS +  +    SL+AL +YY +   G AHRA+SDV  LS++ Q
Subjt:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDL
        +LT DLKL +S LV R  TASD+
Subjt:  RLTFDLKLGISYLVERSFTASDL

Q895K2 DNA polymerase III PolC-type1.5e-1026.77Show/hide
Query:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDVPF
        ++FDIETTG S   D+I+EI    +  G+    + T +NPE  I    +     H     + P+++E++P  + F++         + +AHN   FDV F
Subjt:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDVPF

Query:  LLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRLTFDLK----LGISYLVERSFTASDL
        + K      +    N    DT+ L + L      ++ +  L  + ++  IPL+ + HRA+ D  +   IL +   DLK    + ++ L E  F   D+
Subjt:  LLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRLTFDLK----LGISYLVERSFTASDL

Q8EQU6 DNA polymerase III PolC-type5.0e-0931.07Show/hide
Query:  TVLIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYI--TNSYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTF
        T ++FD+ETTGLS   D I+E+A   + GGE    F++  NP   +  T   L  IT+ MV+  + P + +++       K      G+ + +AHN  +F
Subjt:  TVLIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYI--TNSYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTF

Query:  DVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL
        D+ FL + F R   +   N +  DT+ LAR L+     ++    L  L ++ DI L    HRA+ D  +   +L +L
Subjt:  DVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRL

Q8RA32 DNA polymerase III PolC-type1.2e-1029.1Show/hide
Query:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITN--SYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDV
        ++FDIETTGLS   D I+EI    +   +   TF+T +NP+  I++  + L  I   MV   + P ++E++P  L+F K         + +AHN   FDV
Subjt:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITN--SYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDV

Query:  PFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRLTFDL-KLGISYLVE
         F+  +  +  + +    L  DT+ L+R L +     +    L  L E++++ L+   HRA+ D  + + I  ++   L ++GI  + E
Subjt:  PFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRLTFDL-KLGISYLVE

Q8XJR3 DNA polymerase III PolC-type1.3e-0931.21Show/hide
Query:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITN--SYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDV
        ++FDIETTG S   D+I+EI    L  GE   +F T ++P+  I    + L  IT +MV+    P + E++P  ++FV       G+ + +AHN   FDV
Subjt:  LIFDIETTGLSRDKDRIVEIAFQDLSGGE-NSTFQTLINPECYITN--SYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNGRTFDV

Query:  PFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
         F+ K        +       DT+ LAR L       + K+ L  + ++  I L  + HRA+ D  + + IL+
Subjt:  PFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-6644.27Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  +++G    RW R++V+T       T  SR  S+ ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL
        +S T+   + ++QQ + ++KD +  +TV++ D+ETTGL R  +RI+EIA QD++GG  STFQTL+NP    ITN+++H I N MV RPEVPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL

Query:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        L++V+SRQKP G+V+ +AHNG++FD  FL+ EF+RCS +IP NWL  D++ LAR  MKS +  +    SL+AL +YY +   G AHRA+SDV  LS++ Q
Subjt:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDL
        +LT DLKL +S LV R  TASD+
Subjt:  RLTFDLKLGISYLVERSFTASDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-6644.27Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  +++G    RW R++V+T       T  SR  S+ ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL
        +S T+   + ++QQ + ++KD +  +TV++ D+ETTGL R  +RI+EIA QD++GG  STFQTL+NP    ITN+++H I N MV RPEVPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL

Query:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        L++V+SRQKP G+V+ +AHNG++FD  FL+ EF+RCS +IP NWL  D++ LAR  MKS +  +    SL+AL +YY +   G AHRA+SDV  LS++ Q
Subjt:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDL
        +LT DLKL +S LV R  TASD+
Subjt:  RLTFDLKLGISYLVERSFTASDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-6644.27Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  +++G    RW R++V+T       T  SR  S+ ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL
        +S T+   + ++QQ + ++KD +  +TV++ D+ETTGL R  +RI+EIA QD++GG  STFQTL+NP    ITN+++H I N MV RPEVPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL

Query:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        L++V+SRQKP G+V+ +AHNG++FD  FL+ EF+RCS +IP NWL  D++ LAR  MKS +  +    SL+AL +YY +   G AHRA+SDV  LS++ Q
Subjt:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDL
        +LT DLKL +S LV R  TASD+
Subjt:  RLTFDLKLGISYLVERSFTASDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-6644.27Show/hide
Query:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  +++G    RW R++V+T       T  SR  S+ ++ +L  +V  +  +     E
Subjt:  MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTE

Query:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL
        +S T+   + ++QQ + ++KD +  +TV++ D+ETTGL R  +RI+EIA QD++GG  STFQTL+NP    ITN+++H I N MV RPEVPRM+ELIPI 
Subjt:  KSETQKLQYCDIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECY-ITNSYLHDITNHMVSRPEVPRMKELIPIL

Query:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ
        L++V+SRQKP G+V+ +AHNG++FD  FL+ EF+RCS +IP NWL  D++ LAR  MKS +  +    SL+AL +YY +   G AHRA+SDV  LS++ Q
Subjt:  LQFVKSRQKPDGHVLFIAHNGRTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKI-TKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQ

Query:  RLTFDLKLGISYLVERSFTASDL
        +LT DLKL +S LV R  TASD+
Subjt:  RLTFDLKLGISYLVERSFTASDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTTTCGATCTTGCGAGTTCCGAAGTTTGGAGTCCACACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGGTA
TGGTCAGCTTGGTTTTAGAATCTATAACCTTGAAGGTGGGCAGAACAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCCAAAACCAACCCCAGCC
GTAAACCAAGCGATATCAGAAATGAAATCTTAGAGGAATCGGTCTCCACAAGCTGTACAGTTAGCATTAACAAGACTGAGAAAAGTGAAACTCAGAAGCTTCAATACTGT
GATATTCAACAAACGATTGTTAAGAACAAGGACTTTGCTTGCCCCGTGACAGTTCTAATCTTTGACATTGAAACGACAGGTCTTAGTAGAGACAAAGATAGAATAGTGGA
AATCGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACACTAATAAATCCAGAGTGCTATATTACAAATTCATATCTTCATGACATTACAAACCATATGG
TCAGTCGACCCGAAGTTCCGAGGATGAAGGAACTTATTCCAATTTTATTACAATTTGTTAAAAGCCGTCAGAAACCTGATGGTCATGTATTATTCATAGCTCATAATGGT
CGTACCTTCGACGTGCCGTTTTTGCTCAAGGAATTCAGCCGTTGCTCCGTCGACATTCCTCAAAATTGGCTATTTTTCGATACCATGCATTTAGCCCGTCTGTTGATGAA
ATCCTCAGATTCGAAGATTACGAAAATCTCATTACAAGCTCTTCGCGAGTATTACGATATTCCGCTGGTGGGTTCAGCTCACCGTGCAATGTCGGACGTGACGTCGTTGT
CGCGGATTCTTCAAAGGCTTACTTTCGACCTCAAGCTAGGCATCTCGTATCTGGTCGAAAGGTCTTTCACAGCTTCAGATCTGATTAATAAGAAGAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTTTTCGATCTTGCGAGTTCCGAAGTTTGGAGTCCACACTTTAGCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGGTCATAGTTCTTGGTA
TGGTCAGCTTGGTTTTAGAATCTATAACCTTGAAGGTGGGCAGAACAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCCAAAACCAACCCCAGCC
GTAAACCAAGCGATATCAGAAATGAAATCTTAGAGGAATCGGTCTCCACAAGCTGTACAGTTAGCATTAACAAGACTGAGAAAAGTGAAACTCAGAAGCTTCAATACTGT
GATATTCAACAAACGATTGTTAAGAACAAGGACTTTGCTTGCCCCGTGACAGTTCTAATCTTTGACATTGAAACGACAGGTCTTAGTAGAGACAAAGATAGAATAGTGGA
AATCGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACACTAATAAATCCAGAGTGCTATATTACAAATTCATATCTTCATGACATTACAAACCATATGG
TCAGTCGACCCGAAGTTCCGAGGATGAAGGAACTTATTCCAATTTTATTACAATTTGTTAAAAGCCGTCAGAAACCTGATGGTCATGTATTATTCATAGCTCATAATGGT
CGTACCTTCGACGTGCCGTTTTTGCTCAAGGAATTCAGCCGTTGCTCCGTCGACATTCCTCAAAATTGGCTATTTTTCGATACCATGCATTTAGCCCGTCTGTTGATGAA
ATCCTCAGATTCGAAGATTACGAAAATCTCATTACAAGCTCTTCGCGAGTATTACGATATTCCGCTGGTGGGTTCAGCTCACCGTGCAATGTCGGACGTGACGTCGTTGT
CGCGGATTCTTCAAAGGCTTACTTTCGACCTCAAGCTAGGCATCTCGTATCTGGTCGAAAGGTCTTTCACAGCTTCAGATCTGATTAATAAGAAGAAGAACTAG
Protein sequenceShow/hide protein sequence
MCFSILRVPKFGVHTLANLWRENFHPLNRNYGHSSWYGQLGFRIYNLEGGQNKRWTRKSVTTKAGRKAKTNPSRKPSDIRNEILEESVSTSCTVSINKTEKSETQKLQYC
DIQQTIVKNKDFACPVTVLIFDIETTGLSRDKDRIVEIAFQDLSGGENSTFQTLINPECYITNSYLHDITNHMVSRPEVPRMKELIPILLQFVKSRQKPDGHVLFIAHNG
RTFDVPFLLKEFSRCSVDIPQNWLFFDTMHLARLLMKSSDSKITKISLQALREYYDIPLVGSAHRAMSDVTSLSRILQRLTFDLKLGISYLVERSFTASDLINKKKN