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Lag0036487 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036487
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr3:47167828..47168469
RNA-Seq ExpressionLag0036487
SyntenyLag0036487
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG55646.1 hypothetical protein EZV62_020902 [Acer yangbiense]1.8e-3340.27Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N
        M +YL+ MK  AD L + G+P  E+ L  N   GLD EY+P+   I A+E  TWQE+Y TL+++++ L H+N VSA  +L ++ + +++T         N
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N

Query:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS
         +   ++ N G ++   R     G GR RGRGGRN     NS+P+CQVCGK GH+   CY R +  YMGS P      +S +  +ATP  ++D +W   S
Subjt:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS

Query:  GATNHTTNDIQNLGQQNAYNG
        GATNH TND  NL  ++ Y G
Subjt:  GATNHTTNDIQNLGQQNAYNG

TXG69253.1 hypothetical protein EZV62_004188 [Acer yangbiense]1.1e-3340.27Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N
        M +YL+ MK  AD L + G+P  E+ L  N+  GLD EY+P+   I A+E  TWQE+Y TL+++++ L H+N VSA  +L ++ + +++T         N
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N

Query:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS
         +   ++ N G ++   R     G GR RGRGGRN     NS+P+CQVCGK GH+   CY R +  YMGS P      +S +  +ATP  ++D +W   S
Subjt:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS

Query:  GATNHTTNDIQNLGQQNAYNG
        GATNH TND  NL  ++ Y G
Subjt:  GATNHTTNDIQNLGQQNAYNG

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]5.6e-5156.87Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTENFSQETRSQ
        MSDYLS+MKQ AD LTL GEP+S SSL+++  TGL+ EYL + CQINAKE+I+WQEV+ TLITFEN L HLN VS + D+S  SANY   ++ SQ     
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTENFSQETRSQ

Query:  NHGYDQIRSQRNNGRGRGRGRGGRNFYPRGN-SKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSGATNHTTNDIQ
          G  Q R Q  N   RGR RGGR    R N S+P+CQVCGK+GH    CYHRLNM+YMG+ P+ G  +  A I  P +I DP+WL+ SGATNH TND  
Subjt:  NHGYDQIRSQRNNGRGRGRGRGGRNFYPRGN-SKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSGATNHTTNDIQ

Query:  NLGQQNAYNGS
        NLGQQ  Y G+
Subjt:  NLGQQNAYNGS

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]1.6e-3442.73Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------
        MS+YL  MKQ ++ L L GEPV+ + L++   +GL+ EYLP+ CQI  K+S +WQE++ TL+TFENTL  LN VS      +S+ S NYV ++       
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------

Query:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG
          + SQ  + Q  G       +NN RGRGRGR     Y   NSKPSCQ+CGK GH    CY R +  +  +      +  +A +A P I+ +PSWL  SG
Subjt:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG

Query:  ATNHTTNDIQNLGQQNAYNG
        AT+H T+D+ NL  ++ YNG
Subjt:  ATNHTTNDIQNLGQQNAYNG

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]1.6e-3442.73Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------
        MS+YL  MKQ ++ L L GEPV+ + L++   +GL+ EYLP+ CQI  K+S +WQE++ TL+TFENTL  LN VS      +S+ S NYV ++       
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------

Query:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG
          + SQ  + Q  G       +NN RGRGRGR     Y   NSKPSCQ+CGK GH    CY R +  +  +      +  +A +A P I+ +PSWL  SG
Subjt:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG

Query:  ATNHTTNDIQNLGQQNAYNG
        AT+H T+D+ NL  ++ YNG
Subjt:  ATNHTTNDIQNLGQQNAYNG

TrEMBL top hitse value%identityAlignment
A0A5C7HHE9 Uncharacterized protein8.8e-3440.27Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N
        M +YL+ MK  AD L + G+P  E+ L  N   GLD EY+P+   I A+E  TWQE+Y TL+++++ L H+N VSA  +L ++ + +++T         N
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N

Query:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS
         +   ++ N G ++   R     G GR RGRGGRN     NS+P+CQVCGK GH+   CY R +  YMGS P      +S +  +ATP  ++D +W   S
Subjt:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS

Query:  GATNHTTNDIQNLGQQNAYNG
        GATNH TND  NL  ++ Y G
Subjt:  GATNHTTNDIQNLGQQNAYNG

A0A5C7IJ06 Uncharacterized protein5.1e-3440.27Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N
        M +YL+ MK  AD L + G+P  E+ L  N+  GLD EY+P+   I A+E  TWQE+Y TL+++++ L H+N VSA  +L ++ + +++T         N
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTE--------N

Query:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS
         +   ++ N G ++   R     G GR RGRGGRN     NS+P+CQVCGK GH+   CY R +  YMGS P      +S +  +ATP  ++D +W   S
Subjt:  FSQETRSQNHGYDQI--RSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAP--KEGEHSAAASIATPGIINDPSWLLYS

Query:  GATNHTTNDIQNLGQQNAYNG
        GATNH TND  NL  ++ Y G
Subjt:  GATNHTTNDIQNLGQQNAYNG

A0A6J1CLV9 uncharacterized protein LOC1110128092.7e-5156.87Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTENFSQETRSQ
        MSDYLS+MKQ AD LTL GEP+S SSL+++  TGL+ EYL + CQINAKE+I+WQEV+ TLITFEN L HLN VS + D+S  SANY   ++ SQ     
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTENFSQETRSQ

Query:  NHGYDQIRSQRNNGRGRGRGRGGRNFYPRGN-SKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSGATNHTTNDIQ
          G  Q R Q  N   RGR RGGR    R N S+P+CQVCGK+GH    CYHRLNM+YMG+ P+ G  +  A I  P +I DP+WL+ SGATNH TND  
Subjt:  NHGYDQIRSQRNNGRGRGRGRGGRNFYPRGN-SKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSGATNHTTNDIQ

Query:  NLGQQNAYNGS
        NLGQQ  Y G+
Subjt:  NLGQQNAYNGS

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X27.9e-3542.73Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------
        MS+YL  MKQ ++ L L GEPV+ + L++   +GL+ EYLP+ CQI  K+S +WQE++ TL+TFENTL  LN VS      +S+ S NYV ++       
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------

Query:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG
          + SQ  + Q  G       +NN RGRGRGR     Y   NSKPSCQ+CGK GH    CY R +  +  +      +  +A +A P I+ +PSWL  SG
Subjt:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG

Query:  ATNHTTNDIQNLGQQNAYNG
        AT+H T+D+ NL  ++ YNG
Subjt:  ATNHTTNDIQNLGQQNAYNG

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X17.9e-3542.73Show/hide
Query:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------
        MS+YL  MKQ ++ L L GEPV+ + L++   +GL+ EYLP+ CQI  K+S +WQE++ TL+TFENTL  LN VS      +S+ S NYV ++       
Subjt:  MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVS--ALPDLSNASANYVSTE-------

Query:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG
          + SQ  + Q  G       +NN RGRGRGR     Y   NSKPSCQ+CGK GH    CY R +  +  +      +  +A +A P I+ +PSWL  SG
Subjt:  --NFSQETRSQNHGYDQIRSQRNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSG

Query:  ATNHTTNDIQNLGQQNAYNG
        AT+H T+D+ NL  ++ YNG
Subjt:  ATNHTTNDIQNLGQQNAYNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACTACCTATCTTCAATGAAGCAGAACGCAGATGGACTGACCCTTGTTGGTGAACCTGTAAGTGAAAGTTCACTAATAACAAACACATTTACGGGTCTAGATGT
TGAATATTTACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTTAACACTCATCACGTTTGAGAATACTCTCAATCATCTCAATCAAG
TAAGTGCACTTCCGGATTTGTCTAATGCTTCAGCTAACTATGTTTCTACCGAAAATTTCAGTCAAGAGACTAGATCACAGAACCATGGGTATGACCAAATTAGAAGCCAA
CGAAACAATGGTAGAGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAACCCTCATGTCAAGTGTGCGGAAAGATGGGGCACACTGTTGA
AAAATGCTACCATCGGCTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTCCATTGCAACCCCAGGCATAATAAATGACCCAAGCT
GGCTACTATATAGTGGTGCCACCAATCACACCACAAATGATATTCAAAATCTTGGCCAACAGAATGCATACAATGGGAGCAACTTACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACTACCTATCTTCAATGAAGCAGAACGCAGATGGACTGACCCTTGTTGGTGAACCTGTAAGTGAAAGTTCACTAATAACAAACACATTTACGGGTCTAGATGT
TGAATATTTACCGGTAGCATGCCAGATAAATGCCAAAGAATCAATCACTTGGCAAGAAGTTTATTTAACACTCATCACGTTTGAGAATACTCTCAATCATCTCAATCAAG
TAAGTGCACTTCCGGATTTGTCTAATGCTTCAGCTAACTATGTTTCTACCGAAAATTTCAGTCAAGAGACTAGATCACAGAACCATGGGTATGACCAAATTAGAAGCCAA
CGAAACAATGGTAGAGGTAGAGGTAGAGGTAGAGGTGGAAGAAATTTCTACCCAAGAGGAAACTCAAAACCCTCATGTCAAGTGTGCGGAAAGATGGGGCACACTGTTGA
AAAATGCTACCATCGGCTCAATATGCGCTACATGGGAAGCGCACCCAAAGAAGGTGAACACTCTGCAGCTGCTTCCATTGCAACCCCAGGCATAATAAATGACCCAAGCT
GGCTACTATATAGTGGTGCCACCAATCACACCACAAATGATATTCAAAATCTTGGCCAACAGAATGCATACAATGGGAGCAACTTACAGTAG
Protein sequenceShow/hide protein sequence
MSDYLSSMKQNADGLTLVGEPVSESSLITNTFTGLDVEYLPVACQINAKESITWQEVYLTLITFENTLNHLNQVSALPDLSNASANYVSTENFSQETRSQNHGYDQIRSQ
RNNGRGRGRGRGGRNFYPRGNSKPSCQVCGKMGHTVEKCYHRLNMRYMGSAPKEGEHSAAASIATPGIINDPSWLLYSGATNHTTNDIQNLGQQNAYNGSNLQ