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Lag0036509 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036509
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPol-like polyprotein/retrotransposon
Genome locationchr3:47616973..47617755
RNA-Seq ExpressionLag0036509
SyntenyLag0036509
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR45251.1 hypothetical protein CICLE_v10003098mg [Citrus clementina]2.0e-1183.72Show/hide
Query:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
        F SPVK ++EKFDGR+NFGLWQVQVKDVLIQSGLHKALKG+ S
Subjt:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
KAF7802225.1 cytochrome p450 [Senna tora]1.5e-1182.61Show/hide
Query:  MSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
        MS F S VK DVEKFDGR+NFGLWQVQVKDVLIQSGLHKAL+G+ S
Subjt:  MSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
RYR65700.1 hypothetical protein Ahy_A03g011629 [Arachis hypogaea]7.6e-1171.43Show/hide
Query:  AEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
        A MS + S VK+++EKFDGR+NFGLWQ+QVKDVLIQSGLHKALK + S+
Subjt:  AEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]1.5e-1484.31Show/hide
Query:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSDG
        EA+MS FMSPVK+DVEKFDG +NFGLWQVQVKDVLIQS LHKALKGR S+G
Subjt:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSDG
XP_022154929.1 uncharacterized protein LOC111022075 [Momordica charantia]1.8e-1278Show/hide
Query:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
        EA++S  MSPVK+DVEKFD  +NFGLWQVQVKDV+IQSGLHKALKGR S+
Subjt:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
TrEMBL top hitse value%identityAlignment
A0A2H5QXN2 Uncharacterized protein9.7e-1283.72Show/hide
Query:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
        F SPVK ++EKFDGR+NFGLWQVQVKDVLIQSGLHKALKG+ S
Subjt:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
A0A445DRA2 Uncharacterized protein3.7e-1171.43Show/hide
Query:  AEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
        A MS + S VK+++EKFDGR+NFGLWQ+QVKDVLIQSGLHKALK + S+
Subjt:  AEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
A0A6J1CG82 uncharacterized protein LOC1110105217.2e-1584.31Show/hide
Query:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSDG
        EA+MS FMSPVK+DVEKFDG +NFGLWQVQVKDVLIQS LHKALKGR S+G
Subjt:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSDG
A0A6J1DNQ5 uncharacterized protein LOC1110220758.8e-1378Show/hide
Query:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
        EA++S  MSPVK+DVEKFD  +NFGLWQVQVKDV+IQSGLHKALKGR S+
Subjt:  EAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSD
V4T6T3 Uncharacterized protein9.7e-1283.72Show/hide
Query:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
        F SPVK ++EKFDGR+NFGLWQVQVKDVLIQSGLHKALKG+ S
Subjt:  FMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRS
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.4e-0454.05Show/hide
Query:  MSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKAL
        MS VK +V KF+G   F  WQ +++D+LIQ GLHK L
Subjt:  MSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKAL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTATCACCCTTGTCATCTCTTTCCTTCAAGCAAACTATTGGGTTTTGGCAAAATGTTAGAAGGGAGTTTGTCCCACCTCGGAAAGCATTGTCTGACCTTCCACA
TCAGAAAGCAAGGAGTGAAGCAGAAATGTCAAGCTTCATGAGTCCAGTGAAGATGGACGTGGAGAAATTTGATGGAAGGATGAACTTCGGCTTGTGGCAAGTGCAAGTCA
AGGATGTGCTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACGAAGCGATGGTCCTTTGAAAGCGGTGAATGTGGTCCAGTGGAGTCTAGTGGCTGTTCCAGTA
GAGGTTCGAAGAAGTCCAGCATCAGTGATGAAGATTGGGAGGAAAGTGCAATCAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTATCACCCTTGTCATCTCTTTCCTTCAAGCAAACTATTGGGTTTTGGCAAAATGTTAGAAGGGAGTTTGTCCCACCTCGGAAAGCATTGTCTGACCTTCCACA
TCAGAAAGCAAGGAGTGAAGCAGAAATGTCAAGCTTCATGAGTCCAGTGAAGATGGACGTGGAGAAATTTGATGGAAGGATGAACTTCGGCTTGTGGCAAGTGCAAGTCA
AGGATGTGCTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACGAAGCGATGGTCCTTTGAAAGCGGTGAATGTGGTCCAGTGGAGTCTAGTGGCTGTTCCAGTA
GAGGTTCGAAGAAGTCCAGCATCAGTGATGAAGATTGGGAGGAAAGTGCAATCAGATTAA
Protein sequenceShow/hide protein sequence
MVLSPLSSLSFKQTIGFWQNVRREFVPPRKALSDLPHQKARSEAEMSSFMSPVKMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRRSDGPLKAVNVVQWSLVAVPV
EVRRSPASVMKIGRKVQSD