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Lag0036533 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036533
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:48069856..48070299
RNA-Seq ExpressionLag0036533
SyntenyLag0036533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]5.4e-2952.76Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE+V P G +E  VTFG G ++VT+M++ LVVNY  +YNAILGRPT+H L+ + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R+ DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.0e-2748.03Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG + L+ SLTPL+GFGGE++ P+G +EL +TF    +++TRM++FLVV+Y  +YN IL RPT+H L+ + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R  D+     ST+G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]3.0e-2749.22Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE V P G +EL VTFG G +++T+M++FLVV+Y  + NAILGRPT+H LK + S YH+ +KFPT  G+G + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSGD
        EQ++SRECY+ +++  D+     ST+GD
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSGD

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]9.3e-2954.33Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE+V   G +EL VTFG G ++VT+M++FLVVNY  +YNAILGRPT+H LK + STYH+  KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY  ++R+ DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]5.4e-2953.54Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S +T+ V+ LG   L+ S  PL+GFG E+V P G +EL VTFG G ++VT+M++FLVV+Y  +YNAILGR T+H LK + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R  DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141472.6e-2952.76Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE+V P G +E  VTFG G ++VT+M++ LVVNY  +YNAILGRPT+H L+ + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R+ DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

A0A6J1CZ14 uncharacterized protein LOC1110159015.0e-2848.03Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG + L+ SLTPL+GFGGE++ P+G +EL +TF    +++TRM++FLVV+Y  +YN IL RPT+H L+ + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R  D+     ST+G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

A0A6J1DAK4 uncharacterized protein LOC1110189021.4e-2749.22Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE V P G +EL VTFG G +++T+M++FLVV+Y  + NAILGRPT+H LK + S YH+ +KFPT  G+G + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSGD
        EQ++SRECY+ +++  D+     ST+GD
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSGD

A0A6J1DQY2 uncharacterized protein LOC1110223214.5e-2954.33Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S + +  + LG   L+ S  PLVGFGGE+V   G +EL VTFG G ++VT+M++FLVVNY  +YNAILGRPT+H LK + STYH+  KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY  ++R+ DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

A0A6J1DXV4 uncharacterized protein LOC1110251472.6e-2953.54Show/hide
Query:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG
        S +T+ V+ LG   L+ S  PL+GFG E+V P G +EL VTFG G ++VT+M++FLVV+Y  +YNAILGR T+H LK + STYH+ +KFPT  GVG + G
Subjt:  SASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYG

Query:  EQKMSRECYFMALRNIDRKVQATSTSG
        EQ++SRECY+ ++R  DR    TST G
Subjt:  EQKMSRECYFMALRNIDRKVQATSTSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGGCCTCGACCCACTGCGTTCTGAAGCTGGGAAGTGATCGCCTGAGGCCGAGCCTCACGCCACTAGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAG
CGTCGAACTTCTAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGATCAACTTTCTAGTGGTAAACTACATCCCAGCATATAATGCCATCTTGGGACGACCCA
CCCTACATGGACTTAAAGATGTAGCCTCAACCTACCACAAAGTCCTGAAATTCCCAACCGAAGAAGGTGTAGGAGTAGTGTATGGCGAGCAAAAGATGTCGAGGGAATGT
TACTTTATGGCGCTCAGGAACATCGACAGAAAGGTTCAAGCAACGTCGACCTCGGGAGATGGTCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAGCA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGGCCTCGACCCACTGCGTTCTGAAGCTGGGAAGTGATCGCCTGAGGCCGAGCCTCACGCCACTAGTGGGGTTTGGCGGAGAAAAAGTAAGCCCAAGAGGAAG
CGTCGAACTTCTAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGATCAACTTTCTAGTGGTAAACTACATCCCAGCATATAATGCCATCTTGGGACGACCCA
CCCTACATGGACTTAAAGATGTAGCCTCAACCTACCACAAAGTCCTGAAATTCCCAACCGAAGAAGGTGTAGGAGTAGTGTATGGCGAGCAAAAGATGTCGAGGGAATGT
TACTTTATGGCGCTCAGGAACATCGACAGAAAGGTTCAAGCAACGTCGACCTCGGGAGATGGTCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCTTCCAATGGAGCA
TTGA
Protein sequenceShow/hide protein sequence
MRSASTHCVLKLGSDRLRPSLTPLVGFGGEKVSPRGSVELLVTFGEGLQTVTRMINFLVVNYIPAYNAILGRPTLHGLKDVASTYHKVLKFPTEEGVGVVYGEQKMSREC
YFMALRNIDRKVQATSTSGDGRGRAFEGSSYPLPMEH