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Lag0036556 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036556
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:48439667..48440105
RNA-Seq ExpressionLag0036556
SyntenyLag0036556
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7814608.1 putative ZmL1 non-LTR retrotransposon protein [Senna tora]8.3e-0436.27Show/hide
Query:  IKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDF-DFTCNQISS
        I+ LE+ AILEGIK      + N   +EVE D  +   +L     D S ++L V+ I    S+F  + F   SR+AN VAH++ +   +F D T N +  
Subjt:  IKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDF-DFTCNQISS

Query:  LE
        LE
Subjt:  LE
KAF7821986.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]2.2e-0436.96Show/hide
Query:  IKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFDF
        I+ +E+ A+LEG+K     C    I   +ESD+   V +L   + D S + L ++EI  L S F SI F    REAN VAH++A   ++F +
Subjt:  IKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFDF
XP_023928427.1 uncharacterized protein LOC112039753 [Quercus suber]8.3e-0432.61Show/hide
Query:  DIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFD
        +++ +E+ AI   I+  + T     I   +ESDS+E VK +   ++    ++  +++++ LA   K+  FLH  REAN VAH++A  AI  D
Subjt:  DIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFD
XP_037439691.1 uncharacterized protein LOC119307722 isoform X1 [Triticum dicoccoides]4.9e-0436.05Show/hide
Query:  DIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVAR
        D+ ++E+ A+LEG++   H       +L VESDS E V+ +T  SE  +   +  D+ + + S F     +HC+RE+N VAH +AR
Subjt:  DIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVAR
TrEMBL top hitse value%identityAlignment
A0A6J1CNR4 uncharacterized protein LOC1110129506.9e-0434.44Show/hide
Query:  ESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFDFTC
        ES A+LEG++   H    N   ++ ESDS++ + +LT     W    +++++I+ LA  F    FLH  R +N  A  VA  A+ FD  C
Subjt:  ESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFDFTC
A0A6P4PAK8 uncharacterized protein LOC1084814129.0e-0443.08Show/hide
Query:  LEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFD
        +EVE D++  +K LT  SED S ++ ++ EI+  A  F+SI F H  REAN VAH + R+   F+
Subjt:  LEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFD
A0A803MUM1 Uncharacterized protein3.3e-0639.56Show/hide
Query:  RVSRKWDIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVA
        +V + WD   +E+KA++ G+K +   C+  ++   VESD    VK++ G  +D S + L   EI+ +A  F SIVF H  REAN VAH++A
Subjt:  RVSRKWDIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTTCCCGAAAATGGGACATCAAAGCTTTGGAATCAAAAGCTATTTTGGAAGGGATCAAATCGATTGTGCATACCTGTGATCAAAATCAAATTTCCCTCGAGGT
GGAATCAGACTCCATGGAAGCTGTGAAGGTCCTGACGGGGAGATCAGAGGACTGGTCGAAGATGAAGCTTTTCGTGGATGAAATTCAGGCTTTGGCTTCACGGTTTAAGT
CCATCGTTTTCCTTCATTGTAGCAGAGAGGCGAATTTTGTGGCTCATTCAGTGGCGAGGAAAGCTATCGATTTTGATTTCACTTGTAACCAGATATCTTCCCTGGAATCA
AATTTGGGGCGTGTGTTTTTGGGCCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTTCCCGAAAATGGGACATCAAAGCTTTGGAATCAAAAGCTATTTTGGAAGGGATCAAATCGATTGTGCATACCTGTGATCAAAATCAAATTTCCCTCGAGGT
GGAATCAGACTCCATGGAAGCTGTGAAGGTCCTGACGGGGAGATCAGAGGACTGGTCGAAGATGAAGCTTTTCGTGGATGAAATTCAGGCTTTGGCTTCACGGTTTAAGT
CCATCGTTTTCCTTCATTGTAGCAGAGAGGCGAATTTTGTGGCTCATTCAGTGGCGAGGAAAGCTATCGATTTTGATTTCACTTGTAACCAGATATCTTCCCTGGAATCA
AATTTGGGGCGTGTGTTTTTGGGCCCCTGA
Protein sequenceShow/hide protein sequence
MRVSRKWDIKALESKAILEGIKSIVHTCDQNQISLEVESDSMEAVKVLTGRSEDWSKMKLFVDEIQALASRFKSIVFLHCSREANFVAHSVARKAIDFDFTCNQISSLES
NLGRVFLGP