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Lag0036574 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036574
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:48732914..48733853
RNA-Seq ExpressionLag0036574
SyntenyLag0036574
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]3.5e-1331.76Show/hide
Query:  LADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDM-----TVSISAVADLQPRRVS--------SVGRSGGPALLWNPEVRFSLLSYSPN
        +A+  N  +P   GG KRK+D D +  +  KK R+EE+++  P +     T      A+   R++S         VG+SGG  LLWN +   S+ S+S  
Subjt:  LADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDM-----TVSISAVADLQPRRVS--------SVGRSGGPALLWNPEVRFSLLSYSPN

Query:  HIDGWVD-GGVNPWRFSGIYGFPQA-----------ELKG---------------------------DLVAIEAL--AWESRDTV-----GAAFTWCNGR
        HID  V   G+N WRF+G YG P+A            LKG                            L AI     A +  D V     G  FTW N R
Subjt:  HIDGWVD-GGVNPWRFSGIYGFPQA-----------ELKG---------------------------DLVAIEAL--AWESRDTV-----GAAFTWCNGR

Query:  PGEEIVWERIDRCLSNVAWQELFPVHELTHLDF
         G   V ER+DR   N  W  LFP  ++ + DF
Subjt:  PGEEIVWERIDRCLSNVAWQELFPVHELTHLDF

PKA50374.1 hypothetical protein AXF42_Ash013463 [Apostasia shenzhenica]2.7e-1335Show/hide
Query:  VSSVGRSGGPALLWNPEVRFSLLSYSPNHIDGWVDGGVN--PWRFSGIYG----------------------------------FPQAELKGDLVAIEAL
        VS VGRSGG A+LWN +   +LLS+S +HID  V    N   WRF+G YG                                    Q+E +G L   E  
Subjt:  VSSVGRSGGPALLWNPEVRFSLLSYSPNHIDGWVDGGVN--PWRFSGIYG----------------------------------FPQAELKGDLVAIEAL

Query:  AWESRDT-----------VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
            R+            +G  FTW NGR GEE + ER+DR +SN++WQ LFP   + HL
Subjt:  AWESRDT-----------VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

PWA83198.1 hypothetical protein CTI12_AA170930 [Artemisia annua]3.5e-1332.24Show/hide
Query:  KRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRR---VSSVGRSGGPALLWNPEVRFSLLSYSPNHID
        K  + ++ ADV N   P +     R+    +     GK++  E +N    D+ +        +PR    V S+GR+GG  L W  E   ++ ++S NHID
Subjt:  KRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRR---VSSVGRSGGPALLWNPEVRFSLLSYSPNHID

Query:  GWV-DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAWESRDTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFP
          V D   N WR +GIYG+P+ +       L   L   +  AW+   T G   TW NGR G   V +R+DR L+N  W +L P
Subjt:  GWV-DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAWESRDTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFP

TXG63522.1 hypothetical protein EZV62_010516 [Acer yangbiense]2.4e-1430.34Show/hide
Query:  GKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPR-RVSSVGRSGGPALLWNPEVRFSLLSYSPNH
        GK WKR ARES    T   A LT+GG  ++V   ++  +     RV ++ ++       I  V + +    V S GRSGG  LLW    +  +LSYS  H
Subjt:  GKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPR-RVSSVGRSGGPALLWNPEVRFSLLSYSPNH

Query:  IDGWV--DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAW---------------------ESRDTV-----------------GAAFTWCNGR
        ID  +  D G+  WRFSGIYG P          L   L  ++ L W                       RD +                 G  FTW N R
Subjt:  IDGWV--DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAW---------------------ESRDTV-----------------GAAFTWCNGR

Query:  PGEEIVWERIDRCLSNVAWQELFPVHELTHLDFS
         G + V ER+DR L++  W+ ++    + HL F+
Subjt:  PGEEIVWERIDRCLSNVAWQELFPVHELTHLDFS

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]2.7e-1332.5Show/hide
Query:  VSSVGRSGGPALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSGIYGFPQAELKGD-------------------------LVAIEALAWESRDT--
        V  VG SGG ALLW  E++  + S+S  H+D  +  + GV  W F+G YG P A L+ D                         L A E     +R    
Subjt:  VSSVGRSGGPALLWNPEVRFSLLSYSPNHIDGWV--DGGVNPWRFSGIYGFPQAELKGD-------------------------LVAIEALAWESRDT--

Query:  ------------------VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
                           GAAFTWCNGR G+ ++ ER+DRC+ N  W   FP+  + HL
Subjt:  ------------------VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

TrEMBL top hitse value%identityAlignment
A0A2N9H567 Reverse transcriptase domain-containing protein6.8e-1529.96Show/hide
Query:  NVSGKGWKRRARESLADVTNLQAPL-TLGGSKR-KVDSDQLAGQ---GGKKTRVEEENRV--------HPDMTVSISAVADLQPRRVSS-----------
        N     WK+RAR + + + +   P+ T G SKR +V  D +      G KK   E+E  V        H D  V       L+ + V S           
Subjt:  NVSGKGWKRRARESLADVTNLQAPL-TLGGSKR-KVDSDQLAGQ---GGKKTRVEEENRV--------HPDMTVSISAVADLQPRRVSS-----------

Query:  ----VGRSGGPALLWNPEVRFSLLSYSPNHIDGWVD-GGVNPWRFSGIYGFPQAELKGDLVAIEALAWESRDTV-------------------GAAFTWC
            VG  GG ALLW  EV   + S+S  HID  +   G   W F+G YG P+   + D + +  +A+ +  T                    G  FTW 
Subjt:  ----VGRSGGPALLWNPEVRFSLLSYSPNHIDGWVD-GGVNPWRFSGIYGFPQAELKGDLVAIEALAWESRDTV-------------------GAAFTWC

Query:  NGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFS
        NGR G + V+ER+DR      W+ LFP  ++ H+ FS
Subjt:  NGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFS

A0A803L8S1 Uncharacterized protein2.8e-1630.65Show/hide
Query:  VVQGREGDKGGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWN
        + +G E    GK  + KGWKR +RE      +++  + + G KR+   DQ   + G                    +V D    R     RSGG ALLW 
Subjt:  VVQGREGDKGGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWN

Query:  PEVRFSLLSYSPNHIDGWVDGGVN-PWRFSGIYGFPQAE-------LKGDLVAIEALAW-----------------------ESRDT-------------
          +  S+ S+S NHID W+   V+  WRF+GIYGFP+ E       L   L++  A  W                       E  D              
Subjt:  PEVRFSLLSYSPNHIDGWVDGGVN-PWRFSGIYGFPQAE-------LKGDLVAIEALAW-----------------------ESRDT-------------

Query:  --VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFSR
          +G  FTW N R G E V E++DR L+N AW+E FP   +THL   R
Subjt:  --VGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFSR

A0A803LCM9 Uncharacterized protein1.8e-1527.87Show/hide
Query:  VVQGREGDKGGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWN
        V  G E    G   +GKGWKR +R+      ++   + + G KR +D+     +      +E+E R    +  ++   +           R GG ALLWN
Subjt:  VVQGREGDKGGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWN

Query:  PEVRFSLLSYSPNHIDGWVDG-GVNPWRFSGIYGFPQAELK---------------------GDLV------------------------AIEALAWESR
          +  ++ S+S NHID  V     + WRFSGIYG P  E K                     GDL+                         +     E  
Subjt:  PEVRFSLLSYSPNHIDGWVDG-GVNPWRFSGIYGFPQAELK---------------------GDLV------------------------AIEALAWESR

Query:  DTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
          +G  FTW N R GEE + ER+DR L+N  W++ F    +THL
Subjt:  DTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

A0A803LHG7 Uncharacterized protein8.9e-1528.69Show/hide
Query:  GGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKV-----DSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWNPEVR
        GGK  + K WKR  R+   ++ N    + + G KR+V      +D L   G + +          D   S +  A  + RR     RSGG A+LW   + 
Subjt:  GGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKV-----DSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWNPEVR

Query:  FSLLSYSPNHIDGWV-DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAW----------------ESRD----------------------TVG
         +++S+S NHID WV + G + WRF+G YG  + E       L   L  +    W                  RD                       +G
Subjt:  FSLLSYSPNHIDGWV-DGGVNPWRFSGIYGFPQAE-------LKGDLVAIEALAW----------------ESRD----------------------TVG

Query:  AAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFSR
          FTW N R G+E V ER+D+  +N+AW++ FP   +THL   R
Subjt:  AAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFSR

A0A803M8Y9 Uncharacterized protein2.0e-1434.36Show/hide
Query:  VSSVG----RSGGPALLWNPEVRFSLLSYSPNHIDGWVD-GGVNPWRFSGIYGFPQAELK---GDLV---------------------------------
        VS VG    RSGG ALLW   +  ++ SYS NHID WV       WRF+G+YGFP+ E K   G L+                                 
Subjt:  VSSVG----RSGGPALLWNPEVRFSLLSYSPNHIDGWVD-GGVNPWRFSGIYGFPQAELK---GDLV---------------------------------

Query:  ---------AIEALAWESRDTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL
                 A+ +   E    +G  FTW N R G+  + ER+DR L+N  W+ELFPV  ++HL
Subjt:  ---------AIEALAWESRDTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGATAGTGTGGTAGTGGTGCAGGGTAGGGAGGGAGATAAGGGTGGGAAGAATGTCAGTGGCAAAGGGTGGAAGAGGCGTGCAAGAGAGAGTTTAGCAGATGT
CACAAACTTACAGGCACCTTTGACTCTGGGTGGGAGTAAGCGGAAGGTTGATTCAGATCAGTTGGCCGGTCAGGGCGGAAAGAAGACTAGAGTGGAGGAGGAAAACAGGG
TCCATCCAGATATGACTGTTTCGATTTCAGCAGTGGCTGACCTTCAGCCCCGCCGTGTGAGCAGTGTTGGGAGAAGTGGGGGTCCAGCGTTGCTGTGGAACCCTGAGGTT
CGGTTTAGTCTTCTGTCATACTCCCCCAATCACATAGATGGGTGGGTGGACGGAGGGGTGAACCCGTGGCGGTTTTCTGGGATTTATGGGTTTCCTCAAGCAGAATTGAA
GGGGGACTTGGTCGCTATTGAAGCACTTGCGTGGGAATCCAGGGACACCGTGGGGGCTGCCTTCACTTGGTGTAATGGGAGGCCGGGGGAGGAAATAGTTTGGGAGAGGA
TTGACAGATGTCTGAGTAATGTTGCTTGGCAGGAGCTGTTTCCAGTGCATGAGTTGACACACCTGGATTTCAGTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGATAGTGTGGTAGTGGTGCAGGGTAGGGAGGGAGATAAGGGTGGGAAGAATGTCAGTGGCAAAGGGTGGAAGAGGCGTGCAAGAGAGAGTTTAGCAGATGT
CACAAACTTACAGGCACCTTTGACTCTGGGTGGGAGTAAGCGGAAGGTTGATTCAGATCAGTTGGCCGGTCAGGGCGGAAAGAAGACTAGAGTGGAGGAGGAAAACAGGG
TCCATCCAGATATGACTGTTTCGATTTCAGCAGTGGCTGACCTTCAGCCCCGCCGTGTGAGCAGTGTTGGGAGAAGTGGGGGTCCAGCGTTGCTGTGGAACCCTGAGGTT
CGGTTTAGTCTTCTGTCATACTCCCCCAATCACATAGATGGGTGGGTGGACGGAGGGGTGAACCCGTGGCGGTTTTCTGGGATTTATGGGTTTCCTCAAGCAGAATTGAA
GGGGGACTTGGTCGCTATTGAAGCACTTGCGTGGGAATCCAGGGACACCGTGGGGGCTGCCTTCACTTGGTGTAATGGGAGGCCGGGGGAGGAAATAGTTTGGGAGAGGA
TTGACAGATGTCTGAGTAATGTTGCTTGGCAGGAGCTGTTTCCAGTGCATGAGTTGACACACCTGGATTTCAGTCGGTAG
Protein sequenceShow/hide protein sequence
MAVDSVVVVQGREGDKGGKNVSGKGWKRRARESLADVTNLQAPLTLGGSKRKVDSDQLAGQGGKKTRVEEENRVHPDMTVSISAVADLQPRRVSSVGRSGGPALLWNPEV
RFSLLSYSPNHIDGWVDGGVNPWRFSGIYGFPQAELKGDLVAIEALAWESRDTVGAAFTWCNGRPGEEIVWERIDRCLSNVAWQELFPVHELTHLDFSR