; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036578 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036578
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr3:48787146..48791632
RNA-Seq ExpressionLag0036578
SyntenyLag0036578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2615114.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]2.0e-3035.56Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRRRVLVEELS---------SQIWEGTIPKRVKFFLWTL
            +F+V  G++   WED W    PLKE FP L  L                         RR +   E+            IW+  +P +VK  +W +
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRRRVLVEELS---------SQIWEGTIPKRVKFFLWTL

Query:  ALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
        A+  +NT D++QRR P +  SP+   LC  K  + + IF
Subjt:  ALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

KAB2620658.1 hypothetical protein D8674_042607 [Pyrus ussuriensis x Pyrus communis]7.0e-3135.29Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQI
            +F+VG G++   WED W    PLKE +P L  L                         RR   +V +EE                       SSQI
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQI

Query:  WEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
        W+  +P +VK  +W +A+  +NT D++QRR P +  SP+   LC  K  + + IF
Subjt:  WEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

KAB2623078.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]8.6e-2932.16Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I +KYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLR--------------------------RRVLVEEL--------------------------
            +FKVG G++   WED W    PLKE FP L  L  R                            V +EE                           
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLR--------------------------RRVLVEEL--------------------------

Query:  ------------------------SSQIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
                                SSQIW+  +P +VK  +W +A+  +NT D++QRR P + ISP+   LC  K  + + IF
Subjt:  ------------------------SSQIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

KAB2635258.1 hypothetical protein D8674_025792 [Pyrus ussuriensis x Pyrus communis]1.1e-3135.66Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFK
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG      + +     S  SPWKDI+     +    +F+
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFK

Query:  VGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQIWEGTIPK
        VG G++   WED W    PLKE FP L  L                         RR    V +EE                       SSQIW+  +P 
Subjt:  VGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQIWEGTIPK

Query:  RVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMEC
        +VK  +W +A+  +NT D++QRR P + ISP+   LC  K  + + IF     T   C
Subjt:  RVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMEC

RVW91479.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.4e-2632.68Show/hide
Query:  ISTSRGLRQ--EAHTLLFLLVVDSPSRMILRAKGK-LSSGFEVGRGQGRGRGLGNTTLPWPGEGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMAC
        +  SRGLRQ     + LF LV D  SRM++RA+ + +  GF  GR         +    +  +G  + K  HLV+W+ V  PK +GGLG+ NI  +N+A 
Subjt:  ISTSRGLRQ--EAHTLLFLLVVDSPSRMILRAKGK-LSSGFEVGRGQGRGRGLGNTTLPWPGEGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMAC

Query:  LSKWLWRFEKEPGALWRKIIHSKYG---DGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLRRR
        L KWLWR+ +E   LW ++I S YG   +G+  D  +  KW S   PWK IA++   +   +R+ VG G++   WED W  ++PL   +P L  + + + 
Subjt:  LSKWLWRFEKEPGALWRKIIHSKYG---DGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLRRR

Query:  VLVEELSSQIWEGTIPKRVKFFLWTLALN------GINTMDKVQRRYPRLQISP
        + +  +         P R   FLW L          I  ++ + R    L +SP
Subjt:  VLVEELSSQIWEGTIPKRVKFFLWTLALN------GINTMDKVQRRYPRLQISP

TrEMBL top hitse value%identityAlignment
A0A5N5GWF9 Ribonuclease H protein9.9e-3135.56Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRRRVLVEELS---------SQIWEGTIPKRVKFFLWTL
            +F+V  G++   WED W    PLKE FP L  L                         RR +   E+            IW+  +P +VK  +W +
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRRRVLVEELS---------SQIWEGTIPKRVKFFLWTL

Query:  ALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
        A+  +NT D++QRR P +  SP+   LC  K  + + IF
Subjt:  ALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

A0A5N5GZA5 zf-RVT domain-containing protein3.4e-3135.29Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQI
            +F+VG G++   WED W    PLKE +P L  L                         RR   +V +EE                       SSQI
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQI

Query:  WEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
        W+  +P +VK  +W +A+  +NT D++QRR P +  SP+   LC  K  + + IF
Subjt:  WEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

A0A5N5H648 Ribonuclease H protein4.1e-2932.16Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I +KYG       L    W        S  SPWKDI+     +
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWK-------SVSSPWKDIARLAGFY

Query:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLR--------------------------RRVLVEEL--------------------------
            +FKVG G++   WED W    PLKE FP L  L  R                            V +EE                           
Subjt:  KNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLR--------------------------RRVLVEEL--------------------------

Query:  ------------------------SSQIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF
                                SSQIW+  +P +VK  +W +A+  +NT D++QRR P + ISP+   LC  K  + + IF
Subjt:  ------------------------SSQIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIF

A0A5N5I637 zf-RVT domain-containing protein5.2e-3235.66Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFK
        EG ++ K +HLVKWE V   K  GGLG+ N+R +N A L+KWLWRF KEP +LW K+I SKYG      + +     S  SPWKDI+     +    +F+
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFK

Query:  VGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQIWEGTIPK
        VG G++   WED W    PLKE FP L  L                         RR    V +EE                       SSQIW+  +P 
Subjt:  VGKGDKALIWEDTWAFERPLKEMFPLLISL-----------------------QLRR---RVLVEEL----------------------SSQIWEGTIPK

Query:  RVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMEC
        +VK  +W +A+  +NT D++QRR P + ISP+   LC  K  + + IF     T   C
Subjt:  RVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMEC

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)6.4e-3032.06Show/hide
Query:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYG-DGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRF
        EG +D K  HLV+WE VT  K  GGLGI ++R +N A  +KWLWRF  EP +LW +II SKYG D    D     K  S  +PW++I++    +    RF
Subjt:  EGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYG-DGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRF

Query:  KVGKGDKALIWEDTWAFERPLKEMFPLLISLQLRRR--------------VLVEELS------------------------------------------S
         VG G+K   WED W  E  LK++FP L SL  R++              +L++ L                                           S
Subjt:  KVGKGDKALIWEDTWAFERPLKEMFPLLISLQLRRR--------------VLVEELS------------------------------------------S

Query:  QIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMECGIGLLKLLERSVASLEMCWI
         IW+   P +++FF+W  A   INT D +QRR P++ +SP+  +LC     N   +F       + C    L+L  R + +L + W+
Subjt:  QIWEGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPN--MLCAVKMRNRHPIFCFIVNTRMECGIGLLKLLERSVASLEMCWI

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.4e-1336.44Show/hide
Query:  KGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIA-RLAGFYKNYSRFKVGKGD
        K  HLVKW  V +PK  GGLG+   ++ N A +SK  WR  +E  +LW  ++  KY  G IRD        S SS W+ IA  L     +   +  G G 
Subjt:  KGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIA-RLAGFYKNYSRFKVGKGD

Query:  KALIWEDTWAFERPLKEM
        +   W D W   +PL E+
Subjt:  KALIWEDTWAFERPLKEM

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.0e-1130.43Show/hide
Query:  DIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFKVGKG
        + KG H   W+ ++  K  GG+G  +I A N+A L K +WR    P +L  K+  S+Y      D L+       S  WK I       +  +R  VG G
Subjt:  DIKGSHLVKWESVTTPKLLGGLGIDNIRAKNMACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFKVGKG

Query:  DKALIWEDTWAFERP
        +  +IW   W   +P
Subjt:  DKALIWEDTWAFERP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGTACTTAATTCTCGTTAATGGTAAACTGAGAGATAAGATTTCGACCTCGAGAGGTCTTAGACAAGAGGCCCACACTCTCCTTTTCTTGCTGGTAGTGGACTC
TCCAAGCAGAATGATCTTGAGGGCCAAAGGGAAATTGTCCTCTGGTTTTGAGGTTGGTAGAGGCCAAGGTAGAGGCAGAGGTTTAGGCAACACAACTCTACCTTGGCCTG
GTGAAGGGGCTGATGATATCAAAGGATCTCATTTGGTGAAATGGGAGTCTGTGACTACTCCTAAATTGCTTGGGGGGCTTGGTATTGACAATATACGAGCTAAGAATATG
GCTTGTCTTTCAAAGTGGCTTTGGAGATTTGAAAAGGAACCTGGGGCTTTATGGAGGAAGATCATCCACAGTAAGTATGGGGACGGTTTTATTCGAGATCACCTGAGTTT
CAAAAAGTGGAAATCTGTCTCTAGCCCGTGGAAGGATATCGCTAGATTGGCTGGTTTTTACAAAAATTACAGTAGGTTTAAGGTTGGTAAAGGGGACAAAGCTCTGATTT
GGGAGGATACCTGGGCATTCGAAAGGCCTCTAAAGGAGATGTTCCCTCTTCTAATATCTTTGCAGTTGAGAAGAAGGGTGCTGGTGGAGGAGTTGAGCTCTCAAATATGG
GAAGGTACTATTCCTAAGAGGGTGAAGTTCTTCTTGTGGACTTTAGCTCTCAATGGTATCAACACTATGGATAAGGTGCAAAGAAGATATCCTAGGCTTCAAATATCCCC
GAACATGTTATGTGCTGTAAAAATGAGGAATCGGCATCCCATCTTTTGCTTCATTGTGAATACGCGGATGGAGTGTGGAATCGGTTTGCTGAAGCTCTTGGAGAGGAGTG
TTGCAAGCCTAGAAATGTGTTGGATTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGTACTTAATTCTCGTTAATGGTAAACTGAGAGATAAGATTTCGACCTCGAGAGGTCTTAGACAAGAGGCCCACACTCTCCTTTTCTTGCTGGTAGTGGACTC
TCCAAGCAGAATGATCTTGAGGGCCAAAGGGAAATTGTCCTCTGGTTTTGAGGTTGGTAGAGGCCAAGGTAGAGGCAGAGGTTTAGGCAACACAACTCTACCTTGGCCTG
GTGAAGGGGCTGATGATATCAAAGGATCTCATTTGGTGAAATGGGAGTCTGTGACTACTCCTAAATTGCTTGGGGGGCTTGGTATTGACAATATACGAGCTAAGAATATG
GCTTGTCTTTCAAAGTGGCTTTGGAGATTTGAAAAGGAACCTGGGGCTTTATGGAGGAAGATCATCCACAGTAAGTATGGGGACGGTTTTATTCGAGATCACCTGAGTTT
CAAAAAGTGGAAATCTGTCTCTAGCCCGTGGAAGGATATCGCTAGATTGGCTGGTTTTTACAAAAATTACAGTAGGTTTAAGGTTGGTAAAGGGGACAAAGCTCTGATTT
GGGAGGATACCTGGGCATTCGAAAGGCCTCTAAAGGAGATGTTCCCTCTTCTAATATCTTTGCAGTTGAGAAGAAGGGTGCTGGTGGAGGAGTTGAGCTCTCAAATATGG
GAAGGTACTATTCCTAAGAGGGTGAAGTTCTTCTTGTGGACTTTAGCTCTCAATGGTATCAACACTATGGATAAGGTGCAAAGAAGATATCCTAGGCTTCAAATATCCCC
GAACATGTTATGTGCTGTAAAAATGAGGAATCGGCATCCCATCTTTTGCTTCATTGTGAATACGCGGATGGAGTGTGGAATCGGTTTGCTGAAGCTCTTGGAGAGGAGTG
TTGCAAGCCTAGAAATGTGTTGGATTGGTTGA
Protein sequenceShow/hide protein sequence
MVKYLILVNGKLRDKISTSRGLRQEAHTLLFLLVVDSPSRMILRAKGKLSSGFEVGRGQGRGRGLGNTTLPWPGEGADDIKGSHLVKWESVTTPKLLGGLGIDNIRAKNM
ACLSKWLWRFEKEPGALWRKIIHSKYGDGFIRDHLSFKKWKSVSSPWKDIARLAGFYKNYSRFKVGKGDKALIWEDTWAFERPLKEMFPLLISLQLRRRVLVEELSSQIW
EGTIPKRVKFFLWTLALNGINTMDKVQRRYPRLQISPNMLCAVKMRNRHPIFCFIVNTRMECGIGLLKLLERSVASLEMCWIG