; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036585 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036585
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor bHLH48
Genome locationchr3:48902732..48905464
RNA-Seq ExpressionLag0036585
SyntenyLag0036585
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136583.1 transcription factor bHLH48 [Cucumis sativus]1.4e-4164.91Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIER TK SVLA+EHS ETTS+VPLNSSVNLEKVKNE  T+TDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

XP_008443095.1 PREDICTED: transcription factor bHLH48 [Cucumis melo]5.2e-4163.74Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIER TK S+LA+EHS ETTS+VPLNSSVN EKVKNE  T+TDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

XP_022931797.1 transcription factor bHLH48-like [Cucurbita moschata]5.4e-3860Show/hide
Query:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST
        V  DDS+H+R+KDV KPYFSA NCNLTF TNS L E   KFSV+AEEHS ETTS+VPLNSSV+LEKVKNE   ETDSNPNHL   ISDP VENNTNQRS 
Subjt:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST

Query:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
        KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

XP_023538801.1 transcription factor bHLH48-like [Cucurbita pepo subsp. pepo]5.4e-3860Show/hide
Query:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST
        V  DDS+HHR+KDV KPYFSA NCNLTF TNS L E   KFSV+AEEHS ETTS+VPLNSSV+LEKVKNE   ETDSNPNH    ISDP VENNTNQRS 
Subjt:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST

Query:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
        KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

XP_038906343.1 transcription factor bHLH48-like [Benincasa hispida]8.1e-4265.5Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIERA K SVLAEEHS ETTS+VPLNSSVNLEKVKNE  TETDSNPN LQTLISDP VE N NQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

TrEMBL top hitse value%identityAlignment
A0A0A0LEI6 BHLH domain-containing protein6.7e-4264.91Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIER TK SVLA+EHS ETTS+VPLNSSVNLEKVKNE  T+TDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

A0A1S3B815 transcription factor bHLH482.5e-4163.74Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIER TK S+LA+EHS ETTS+VPLNSSVN EKVKNE  T+TDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

A0A5D3DPK9 Transcription factor bHLH482.5e-4163.74Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVVNDDS+HH IKDV KPYFSAFNCNLTF TNS LIER TK S+LA+EHS ETTS+VPLNSSVN EKVKNE  T+TDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
         KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

A0A6J1EUQ6 transcription factor bHLH48-like2.6e-3860Show/hide
Query:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST
        V  DDS+H+R+KDV KPYFSA NCNLTF TNS L E   KFSV+AEEHS ETTS+VPLNSSV+LEKVKNE   ETDSNPNHL   ISDP VENNTNQRS 
Subjt:  VVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRST

Query:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
        KRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  KRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

A0A6J1F3F3 transcription factor bHLH48-like3.7e-3259.65Show/hide
Query:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS
        AVV DDS       V KPYF AFNCNLTF TNS LIERA KFSVLAEEHS +TTS V L    NLEKVKNE  TETDSNPN LQTLISDP VE NTNQRS
Subjt:  AVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRS

Query:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK
        TKRKERE                                        E+ RREKINARMKLLQELVP CNK
Subjt:  TKRKERE----------------------------------------EKFRREKINARMKLLQELVPRCNK

SwissProt top hitse value%identityAlignment
Q3EAI1 Transcription factor bHLH605.9e-1138.34Show/hide
Query:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK
        + P   +F   L F +NS L+ERA +FSV+A E      S ET TS+VP NSS NL++VK E   ETDS+    Q LISD  +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK

Query:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNKEKKGEEKKRKKKVTVAGGGERWPAAGRR
        + E                                      E+ RREKINARMKLLQELVP C+   KG +   K K+ V  G      +G++
Subjt:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNKEKKGEEKKRKKKVTVAGGGERWPAAGRR

Q8VZ02 Transcription factor bHLH482.1e-0839.86Show/hide
Query:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------
        LTF +NS L++RA +FSV+A E     S ET +++P N   NL++VK E   ETDS            MVEN N +  S KRKERE              
Subjt:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------

Query:  ------------------------EKFRREKINARMKLLQELVPRCNK
                                E+ RREKINARMKLLQELVP C+K
Subjt:  ------------------------EKFRREKINARMKLLQELVPRCNK

Arabidopsis top hitse value%identityAlignment
AT2G42300.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-0939.86Show/hide
Query:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------
        LTF +NS L++RA +FSV+A E     S ET +++P N   NL++VK E   ETDS            MVEN N +  S KRKERE              
Subjt:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------

Query:  ------------------------EKFRREKINARMKLLQELVPRCNK
                                E+ RREKINARMKLLQELVP C+K
Subjt:  ------------------------EKFRREKINARMKLLQELVPRCNK

AT2G42300.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.9e-0939.47Show/hide
Query:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------
        LTF +NS L++RA +FSV+A E     S ET +++P N   NL++VK E   ETDS            MVEN N +  S KRKERE              
Subjt:  LTFLTNSTLIERATKFSVLAEEH----SSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-NTNQRSTKRKERE--------------

Query:  ------------------------EKFRREKINARMKLLQELVPRCNKEKKG
                                E+ RREKINARMKLLQELVP C+K   G
Subjt:  ------------------------EKFRREKINARMKLLQELVPRCNKEKKG

AT3G57800.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.2e-1238.34Show/hide
Query:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK
        + P   +F   L F +NS L+ERA +FSV+A E      S ET TS+VP NSS NL++VK E   ETDS+    Q LISD  +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK

Query:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNKEKKGEEKKRKKKVTVAGGGERWPAAGRR
        + E                                      E+ RREKINARMKLLQELVP C+   KG +   K K+ V  G      +G++
Subjt:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNKEKKGEEKKRKKKVTVAGGGERWPAAGRR

AT3G57800.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-1341.21Show/hide
Query:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK
        + P   +F   L F +NS L+ERA +FSV+A E      S ET TS+VP NSS NL++VK E   ETDS+    Q LISD  +EN     N N R+ KRK
Subjt:  LKPYFSAFNCNLTFLTNSTLIERATKFSVLAEEH-----SSET-TSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVEN-----NTNQRSTKRK

Query:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNK
        + E                                      E+ RREKINARMKLLQELVP C+K
Subjt:  ERE--------------------------------------EKFRREKINARMKLLQELVPRCNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAAAGGGAATGGTGGGTTTTGGTGCTGTGGCTGTGGCGATGGTGGCCCTGATGCTGGTTGGTGAAGGGGCAAGGACAAGGATGATGAAAGATGAACAGGAGAG
TTATCGGCCTCAGAACTTCATAGCGGCAGGTGGCTTCATACCCACAACGCCAGGGACGCCGGGCTTTGCCACAGGCTTTGGATTTGGACCTTCTGGCTTCTGTGCGTTTC
CGGGGAGCTGTGCTAACAACGTTCCTGCTGCAGTGCTTCCTACTCTTCCTGGCGGCGGCTCCTCTTCCTCCCCCGGTGCCGGTGGTGCTGGTGGCGGAATTGTATTTCTC
TTTGATTCGACTCCATTTCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCGTTTG
GGAATTTGAGCTCCTTCACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCAGATTCCAACAGTGGCGCCGCACGGCCGTTGTGAACGATG
ACTCTATTCACCACCGTATCAAAGATGTGCTGAAACCCTACTTTAGTGCCTTCAATTGCAATTTGACCTTCCTGACGAACTCAACTCTAATCGAACGCGCCACCAAGTTC
TCGGTCTTGGCCGAAGAGCATTCGTCGGAGACGACGAGTACAGTACCGTTGAATTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGGCCATCACTGAAACCGATTCGAA
CCCTAATCACTTGCAGACTTTAATCTCCGATCCGATGGTGGAGAACAACACGAACCAGAGATCGACGAAGAGGAAGGAGCGAGAGGAAAAGTTTAGGAGAGAGAAAATCA
ATGCTCGGATGAAGCTGCTTCAAGAACTGGTCCCTAGATGCAATAAAGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAAGTTACAGTCGCCGGCGGCGGCGAGCGG
TGGCCGGCCGCTGGTCGTCGGCAAGGAGATTTGAAGAAGATGAAGAAAGGGTGGAGGGAAGAGAGGAAGAGGAAAGAGATTAAAAAATACCTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAAAGGGAATGGTGGGTTTTGGTGCTGTGGCTGTGGCGATGGTGGCCCTGATGCTGGTTGGTGAAGGGGCAAGGACAAGGATGATGAAAGATGAACAGGAGAG
TTATCGGCCTCAGAACTTCATAGCGGCAGGTGGCTTCATACCCACAACGCCAGGGACGCCGGGCTTTGCCACAGGCTTTGGATTTGGACCTTCTGGCTTCTGTGCGTTTC
CGGGGAGCTGTGCTAACAACGTTCCTGCTGCAGTGCTTCCTACTCTTCCTGGCGGCGGCTCCTCTTCCTCCCCCGGTGCCGGTGGTGCTGGTGGCGGAATTGTATTTCTC
TTTGATTCGACTCCATTTCCTCTCTCATCGATCGATTGGCTCTGCAGTCCCACATTTGAGGAGTTGGGTTTTACTGGGAATTTGGGTGGATTGATAGGATTTTCCGTTTG
GGAATTTGAGCTCCTTCACTGCACTTCTGGAACTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTAGCCAGATTCCAACAGTGGCGCCGCACGGCCGTTGTGAACGATG
ACTCTATTCACCACCGTATCAAAGATGTGCTGAAACCCTACTTTAGTGCCTTCAATTGCAATTTGACCTTCCTGACGAACTCAACTCTAATCGAACGCGCCACCAAGTTC
TCGGTCTTGGCCGAAGAGCATTCGTCGGAGACGACGAGTACAGTACCGTTGAATTCGAGCGTCAATTTGGAGAAAGTGAAGAACGAGGCCATCACTGAAACCGATTCGAA
CCCTAATCACTTGCAGACTTTAATCTCCGATCCGATGGTGGAGAACAACACGAACCAGAGATCGACGAAGAGGAAGGAGCGAGAGGAAAAGTTTAGGAGAGAGAAAATCA
ATGCTCGGATGAAGCTGCTTCAAGAACTGGTCCCTAGATGCAATAAAGAGAAGAAAGGAGAAGAAAAGAAAAGAAAAAAAAAAGTTACAGTCGCCGGCGGCGGCGAGCGG
TGGCCGGCCGCTGGTCGTCGGCAAGGAGATTTGAAGAAGATGAAGAAAGGGTGGAGGGAAGAGAGGAAGAGGAAAGAGATTAAAAAATACCTAAAATAA
Protein sequenceShow/hide protein sequence
MGRKGMVGFGAVAVAMVALMLVGEGARTRMMKDEQESYRPQNFIAAGGFIPTTPGTPGFATGFGFGPSGFCAFPGSCANNVPAAVLPTLPGGGSSSSPGAGGAGGGIVFL
FDSTPFPLSSIDWLCSPTFEELGFTGNLGGLIGFSVWEFELLHCTSGTSGDAGFRASPLARFQQWRRTAVVNDDSIHHRIKDVLKPYFSAFNCNLTFLTNSTLIERATKF
SVLAEEHSSETTSTVPLNSSVNLEKVKNEAITETDSNPNHLQTLISDPMVENNTNQRSTKRKEREEKFRREKINARMKLLQELVPRCNKEKKGEEKKRKKKVTVAGGGER
WPAAGRRQGDLKKMKKGWREERKRKEIKKYLK