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Lag0036603 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036603
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:49118361..49119306
RNA-Seq ExpressionLag0036603
SyntenyLag0036603
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A3P8P8U8 Uncharacterized protein1.5e-0426.79Show/hide
Query:  EKLGEAQEILELLFKLSRSSQGCVHSSGEKLGEAEEIPEPLFKRH-GHPRGAYTLPGKSLGRPRKFLSLSSSVMVIPGVRTLFWGKAWAGPGNSRASL-Q
        E+    Q IL+ +F       G       +L E    P  L  R  G      +L  + LG PR    L   ++  P   +    +   GP +    + +
Subjt:  EKLGEAQEILELLFKLSRSSQGCVHSSGEKLGEAEEIPEPLFKRH-GHPRGAYTLPGKSLGRPRKFLSLSSSVMVIPGVRTLFWGKAWAGPGNSRASL-Q

Query:  ASWSSRGAYTLLGKSLGRPRKLSSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTLLGKSLGRPKKFPSLSSSCHGHPRGAYTLLGKGL
             R    L+ + LG PR LS L     G PR    L+ + LG PR    L     G PR    L+ + LG P+    L     G PR    L+ + L
Subjt:  ASWSSRGAYTLLGKSLGRPRKLSSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTLLGKSLGRPKKFPSLSSSCHGHPRGAYTLLGKGL

Query:  GRPRKFLSL
        G PR    L
Subjt:  GRPRKFLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCCTTGGAGTTGGGATGCTTGGCCTTGGCATGACGGGGTGCGTACACTCTTCTGCGGAAAAGCTTGGGGAGGCCCAGGAAATTCTCGAGCTTCTCTTCAAGCT
GTCACGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACA
CTCTTCCGGGGAAAAGCTTGGGGAGGCCCAGGAAATTCTTGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGCAGGC
CCAGGAAATTCCCGAGCCTCTCTTCAAGCATCATGGTCATCTAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCCAGGAAATTGTCGAGCCTCTCTTCAAG
CTGTCACGGTCATCCCAGGGGTGCGTACACTCTTCTTGGGAAAAGCTTGGGAAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCTAGGGGTGCGT
ACACTCTTCTGGGGAAAAGCTTGGGGAGACCTAAGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCGAGGAAATTCCTGAGCCTCTCTTCAAGCTGTTGTATTCATCCCGAGGGTGCGTACACTCAGTCGGGGGAAGTGCGAAAGTCTGGCCTCTACAAGGATCATTCCCG
TCTGGCCACACGTGTTACATCCTATGGAAAAGCACTTTATGCGAAACACAACGCAAAGAACTGTTGGGATTGGTGCCCTAAAACTCGTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCCTTGGAGTTGGGATGCTTGGCCTTGGCATGACGGGGTGCGTACACTCTTCTGCGGAAAAGCTTGGGGAGGCCCAGGAAATTCTCGAGCTTCTCTTCAAGCT
GTCACGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACA
CTCTTCCGGGGAAAAGCTTGGGGAGGCCCAGGAAATTCTTGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGCAGGC
CCAGGAAATTCCCGAGCCTCTCTTCAAGCATCATGGTCATCTAGAGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCCAGGAAATTGTCGAGCCTCTCTTCAAG
CTGTCACGGTCATCCCAGGGGTGCGTACACTCTTCTTGGGAAAAGCTTGGGAAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCTAGGGGTGCGT
ACACTCTTCTGGGGAAAAGCTTGGGGAGACCTAAGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCGAGGAAATTCCTGAGCCTCTCTTCAAGCTGTTGTATTCATCCCGAGGGTGCGTACACTCAGTCGGGGGAAGTGCGAAAGTCTGGCCTCTACAAGGATCATTCCCG
TCTGGCCACACGTGTTACATCCTATGGAAAAGCACTTTATGCGAAACACAACGCAAAGAACTGTTGGGATTGGTGCCCTAAAACTCGTAGATAA
Protein sequenceShow/hide protein sequence
MVGLGVGMLGLGMTGCVHSSAEKLGEAQEILELLFKLSRSSQGCVHSSGEKLGEAEEIPEPLFKRHGHPRGAYTLPGKSLGRPRKFLSLSSSVMVIPGVRTLFWGKAWAG
PGNSRASLQASWSSRGAYTLLGKSLGRPRKLSSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTLLGKSLGRPKKFPSLSSSCHGHPRGAYTLLGKGLG
RPRKFLSLSSSCCIHPEGAYTQSGEVRKSGLYKDHSRLATRVTSYGKALYAKHNAKNCWDWCPKTRR