; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036605 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036605
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr3:49154609..49155754
RNA-Seq ExpressionLag0036605
SyntenyLag0036605
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.4e-1066.07Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
KAA0061331.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.2e-1066.07Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
KAA0063700.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-1062.71Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ KLF E N D  +HS +PSRMKRK S+ INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.2e-1064.41Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
TYK28989.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.2e-1064.41Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
TrEMBL top hitse value%identityAlignment
A0A5A7V6H5 Ty3-gypsy retrotransposon protein3.5e-1066.07Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
A0A5A7V935 Ty3-gypsy retrotransposon protein2.0e-1062.71Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ KLF E N D  +HS +PSRMKRK S+ INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
A0A5A7VRG7 Retrotransposon gag protein1.6e-1064.41Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
A0A5D3BBF9 Gag protease polyprotein4.6e-1066.07Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEG
A0A5D3DZZ8 Retrotransposon gag protein2.0e-1064.41Show/hide
Query:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
        M +L+ K F E N D+K+HS +PSRMKRK SV INTEGSL VKP  II TNP NEG +Q
Subjt:  MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGA
AGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATTTGATCAAGACATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGT
CGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGCGAATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCC
CCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCG
CTTCGTGCAATTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCGTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCTCCAAG
TTCAAAGGTTCTCGCGCGCTTCGATGCAGTTCCTTCCTCCAAGTTTGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTGCCACGCGCTTCGC
TATGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCATGCTCTTCGTTGCAGTTCCTTCCTCCAAGTTCG
AAGGTTTTCACGCGCTTCGTTGCAGTTCCTGCCTCCAAGTTCGAAGGTTCTCACGCGCTTCATTGTCGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGCGCTTCGCTGTA
GTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCATCGCTCATGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGA
AGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATTTGATCAAGACATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGT
CGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGCGAATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCC
CCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCG
CTTCGTGCAATTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCGTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCTCCAAG
TTCAAAGGTTCTCGCGCGCTTCGATGCAGTTCCTTCCTCCAAGTTTGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTGCCACGCGCTTCGC
TATGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCATGCTCTTCGTTGCAGTTCCTTCCTCCAAGTTCG
AAGGTTTTCACGCGCTTCGTTGCAGTTCCTGCCTCCAAGTTCGAAGGTTCTCACGCGCTTCATTGTCGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGCGCTTCGCTGTA
GTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCATCGCTCATGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTTGA
Protein sequenceShow/hide protein sequence
MNNLELKLFDEVNSDEKLHSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNPANEGFDQDMTKIRAFKCKSSLSQEPKLHDAPSPHELKSEWKLLPPSSKVPTRFAAVPS
PKFEGSHALRCSSFLTVRRFSRASLQFLPPSSKVLTRFVQFLPPNSKVLTRFAAVPSPKFEGSHALHCSSFLQVQRFSRASMQFLPPSLKVFTRFVAVPSSKFEGCHALR
YAIPSPKFEGSHALRAVPSSKFEGSHALRCSSFLQVRRFSRASLQFLPPSSKVLTRFIVVPSSKFEGSHALRCSSFPPSSKVLTSLRIAHALRCSSFLQV