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Lag0036615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:49371827..49372252
RNA-Seq ExpressionLag0036615
SyntenyLag0036615
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062476.1 uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa]3.5e-1240.15Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQLGK   +RLVE++EQ+ YL EV +S                                   RV+TLE+KV +  + EHG+SSTS V  + ERV E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        L++SQ +++ + N M++DFRAT++ +R E+AD
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

TYK09914.1 uncharacterized protein E5676_scaffold16G00270 [Cucumis melo var. makuwa]1.9e-1043.4Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNSA--IRVETLE--SKVTKPSSTEHGESSTSSVDKMSERVDELNTSQTTMLRLFNEMTQDFRATIEALRGE
        MS+    GK   +RL+E+EEQ+LYL E+P+S   + V+TLE  + + +  + E G+SS+     M ERV EL++SQ T+L + N M +DFRAT+  +R E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNSA--IRVETLE--SKVTKPSSTEHGESSTSSVDKMSERVDELNTSQTTMLRLFNEMTQDFRATIEALRGE

Query:  MADEYT
        +AD  T
Subjt:  MADEYT

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]5.5e-1846.97Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVP---------------------------------NSAIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQL K H++RLVEIEEQLLYLREVP                                 + A+RVETLESK T+P S E G+SST+   ++  R+ E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVP---------------------------------NSAIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        LN S + M++LFNEMT+DF+ TI+ LR EM +
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]4.2e-1846.97Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MS TKQL K H++RLVEIEEQLLYLREVP+S                                 A+RVET ESK T+P S E G+SST+   ++  R+ E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        LN S +TM++LFNEMT+DF+ TI+ LR EM +
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]1.1e-1541.67Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQLGK HI+RLVEIEE+LL+LRE+P++                                  +RVETLE KV +  + E GESS+SS+  M ERV+E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        ++ S+ T++++ +E+T DF+AT++ +R E+A+
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

TrEMBL top hitse value%identityAlignment
A0A5A7UCI7 Uncharacterized protein9.2e-1139.39Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MS+   LGK   +RLVE+EEQ+LYL EVP S                                   RV+TLE  V +  S E G+SST SV  + ERV E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        L++SQ T+L + N M+++FRAT++ +R E+AD
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

A0A5D3DUL1 Uncharacterized protein1.7e-1240.15Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQLGK   +RLVE++EQ+ YL EV +S                                   RV+TLE+KV +  + EHG+SSTS V  + ERV E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        L++SQ +++ + N M++DFRAT++ +R E+AD
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

A0A6J1D906 Reverse transcriptase2.7e-1846.97Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVP---------------------------------NSAIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQL K H++RLVEIEEQLLYLREVP                                 + A+RVETLESK T+P S E G+SST+   ++  R+ E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVP---------------------------------NSAIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        LN S + M++LFNEMT+DF+ TI+ LR EM +
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

A0A6J1DK29 uncharacterized protein LOC1110218292.0e-1846.97Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MS TKQL K H++RLVEIEEQLLYLREVP+S                                 A+RVET ESK T+P S E G+SST+   ++  R+ E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        LN S +TM++LFNEMT+DF+ TI+ LR EM +
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

A0A6J1DLQ6 uncharacterized protein LOC1110223205.6e-1641.67Show/hide
Query:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE
        MSTTKQLGK HI+RLVEIEE+LL+LRE+P++                                  +RVETLE KV +  + E GESS+SS+  M ERV+E
Subjt:  MSTTKQLGKIHIERLVEIEEQLLYLREVPNS---------------------------------AIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDE

Query:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD
        ++ S+ T++++ +E+T DF+AT++ +R E+A+
Subjt:  LNTSQTTMLRLFNEMTQDFRATIEALRGEMAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACTACCAAACAATTAGGCAAGATCCACATTGAGCGACTTGTTGAGATAGAGGAACAATTGCTATATTTGAGGGAAGTACCTAACTCGGCAATAAGGGTAGAGAC
TCTGGAAAGCAAAGTTACAAAGCCTAGTAGCACTGAACATGGGGAGAGCTCCACGAGTTCCGTCGACAAGATGAGTGAGCGTGTTGACGAGTTGAATACATCCCAAACAA
CCATGTTGCGGTTGTTCAACGAGATGACCCAAGACTTTAGAGCCACCATTGAAGCCTTGAGAGGTGAGATGGCTGATGAATACACGACTGAAATTGACCATGCGAGCAGT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACTACCAAACAATTAGGCAAGATCCACATTGAGCGACTTGTTGAGATAGAGGAACAATTGCTATATTTGAGGGAAGTACCTAACTCGGCAATAAGGGTAGAGAC
TCTGGAAAGCAAAGTTACAAAGCCTAGTAGCACTGAACATGGGGAGAGCTCCACGAGTTCCGTCGACAAGATGAGTGAGCGTGTTGACGAGTTGAATACATCCCAAACAA
CCATGTTGCGGTTGTTCAACGAGATGACCCAAGACTTTAGAGCCACCATTGAAGCCTTGAGAGGTGAGATGGCTGATGAATACACGACTGAAATTGACCATGCGAGCAGT
TGA
Protein sequenceShow/hide protein sequence
MSTTKQLGKIHIERLVEIEEQLLYLREVPNSAIRVETLESKVTKPSSTEHGESSTSSVDKMSERVDELNTSQTTMLRLFNEMTQDFRATIEALRGEMADEYTTEIDHASS