; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036627 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036627
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr3:49644657..49646017
RNA-Seq ExpressionLag0036627
SyntenyLag0036627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG66120.1 hypothetical protein EZV62_007395 [Acer yangbiense]6.7e-2460.44Show/hide
Query:  YESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYE
        +ES+STAR++ L+SQL  +RK+G T++Q+L Q KDIADKF+ + EPLSYR HLGY  EGLG EY+ FVTS++N  DRPS+ DV SLL+++E
Subjt:  YESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYE

XP_022148871.1 uncharacterized protein LOC111017438 [Momordica charantia]5.8e-2853.66Show/hide
Query:  QLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFS
        ++Q+++KDGL+VSQ+LA+IK+I  K S+I EP+S +DH+ YI+EGLG EYN FVTS+QN +D  +L DVR+LL+AY+ RLEKQ SVDQLN+V+AN+AN  
Subjt:  QLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFS

Query:  FSKTQKRNQSNRSSNMPKHSPVP
         ++     +++R  +  +HSP P
Subjt:  FSKTQKRNQSNRSSNMPKHSPVP

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]1.3e-3846.05Show/hide
Query:  NQLLNHIFAFDMESLINGT-HPPPRFLDIAKTQEH-----------------------------------------LRIVYESSSTARVMGLRSQLQKIR
        NQLLN + A  +   ++GT  PPP+FLD  + Q +                                         L  VY+S +TAR+MGL+++LQ +R
Subjt:  NQLLNHIFAFDMESLINGT-HPPPRFLDIAKTQEH-----------------------------------------LRIVYESSSTARVMGLRSQLQKIR

Query:  KDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFSFSKTQK
        KDG +VSQ+LA+IK+IADKF+A+ EPLSYRDHL ++L+GLG+EYN FVTS+ N  D PSL DVRSLL+AYE RL+KQ +VDQLN+ +ANL N S     K
Subjt:  KDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFSFSKTQK

Query:  RNQSNRS-SNMPKHS
        R     S  N  KHS
Subjt:  RNQSNRS-SNMPKHS

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]1.9e-3960Show/hide
Query:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL
        E LR VYESSS A +MG  SQLQKI+KDGLTVSQ+LAQIKD+ D F+AI EPLSYRDHL YILEGLG+EYNPFV+S+ N T+RPS+ADVR+LLI Y+ RL
Subjt:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL

Query:  EKQTSVDQLNMVRANLANFSFSKTQKR---NQSNRSSNMPKHSPVPRLPQHFPFP
        EKQT+ D L +++AN+A+ S +   +     Q NRSS       V   P   P P
Subjt:  EKQTSVDQLNMVRANLANFSFSKTQKR---NQSNRSSNMPKHSPVPRLPQHFPFP

XP_038891713.1 uncharacterized protein LOC120081111 [Benincasa hispida]3.4e-2853.73Show/hide
Query:  MGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRAN
        M L+++LQKIRKD L++SQ+L+QIKD+ADKFS + E +SYRDHL +IL+GLG+EYN FVTS+QN  D  S+ DV SLL++YE +LEKQ ++D LN+ +A 
Subjt:  MGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRAN

Query:  LANFSFSKTQKRNQ----SNRSSNM---PKHSPV
        L+  SF    KRN      N SS +   P  SP+
Subjt:  LANFSFSKTQKRNQ----SNRSSNM---PKHSPV

TrEMBL top hitse value%identityAlignment
A0A5C7I9Y1 Uncharacterized protein3.2e-2460.44Show/hide
Query:  YESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYE
        +ES+STAR++ L+SQL  +RK+G T++Q+L Q KDIADKF+ + EPLSYR HLGY  EGLG EY+ FVTS++N  DRPS+ DV SLL+++E
Subjt:  YESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYE

A0A6J1D6N7 uncharacterized protein LOC1110174382.8e-2853.66Show/hide
Query:  QLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFS
        ++Q+++KDGL+VSQ+LA+IK+I  K S+I EP+S +DH+ YI+EGLG EYN FVTS+QN +D  +L DVR+LL+AY+ RLEKQ SVDQLN+V+AN+AN  
Subjt:  QLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFS

Query:  FSKTQKRNQSNRSSNMPKHSPVP
         ++     +++R  +  +HSP P
Subjt:  FSKTQKRNQSNRSSNMPKHSPVP

A0A6J1DQX7 uncharacterized protein LOC1110223156.1e-3946.05Show/hide
Query:  NQLLNHIFAFDMESLINGT-HPPPRFLDIAKTQEH-----------------------------------------LRIVYESSSTARVMGLRSQLQKIR
        NQLLN + A  +   ++GT  PPP+FLD  + Q +                                         L  VY+S +TAR+MGL+++LQ +R
Subjt:  NQLLNHIFAFDMESLINGT-HPPPRFLDIAKTQEH-----------------------------------------LRIVYESSSTARVMGLRSQLQKIR

Query:  KDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFSFSKTQK
        KDG +VSQ+LA+IK+IADKF+A+ EPLSYRDHL ++L+GLG+EYN FVTS+ N  D PSL DVRSLL+AYE RL+KQ +VDQLN+ +ANL N S     K
Subjt:  KDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFSFSKTQK

Query:  RNQSNRS-SNMPKHS
        R     S  N  KHS
Subjt:  RNQSNRS-SNMPKHS

A0A7J0DER3 Uncharacterized protein1.6e-2339.26Show/hide
Query:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL
        E L  +Y ++S A +  LR+ LQ I+KDGLT   ++ + + + +  ++I EP++Y DHL Y L GLG +YNPFVTS+Q+   RPS+ +V SLL++Y+ RL
Subjt:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL

Query:  EKQTSVDQLNMVRANLANFSFSKTQKRNQSNRS-------------SNMPKHSPVPRLPQHFP
        E+Q++ D L+ ++ANLAN ++ K + +N S  S             +  P +SP P  P+  P
Subjt:  EKQTSVDQLNMVRANLANFSFSKTQKRNQSNRS-------------SNMPKHSPVPRLPQHFP

A0A7J0E8R3 Uncharacterized protein1.6e-2339.26Show/hide
Query:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL
        E L  +Y ++S A +  LR+ LQ I+KDGLT   ++ + + + +  ++I EP++Y DHL Y L GLG +YNPFVTS+Q+   RPS+ +V SLL++Y+ RL
Subjt:  EHLRIVYESSSTARVMGLRSQLQKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRL

Query:  EKQTSVDQLNMVRANLANFSFSKTQKRNQSNRS-------------SNMPKHSPVPRLPQHFP
        E+Q++ D L+ ++ANLAN ++ K + +N S  S             +  P +SP P  P+  P
Subjt:  EKQTSVDQLNMVRANLANFSFSKTQKRNQSNRS-------------SNMPKHSPVPRLPQHFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAACCTCAAGTTTGTCTTCTTCCGGCCAAGACACTATTCCTGCTCTCCCTACAACCTCAACCGTAATCACAGCTCCCTCCCTTATCTCCACCTTTGTTGTCAC
CACCCATGTTTCGACGCCTGGCCCTTCTCATCGATCTCAACTCAGAGGCTTCACTCTTAATCAATTGCTCAACCACATCTTTGCTTTCGACATGGAAAGTTTAATCAACG
GTACGCATCCTCCTCCTAGATTTCTGGATATTGCGAAAACTCAGGAGCATCTTAGAATTGTTTATGAATCGTCTTCCACTGCTCGTGTTATGGGGTTAAGGTCTCAATTA
CAAAAAATCCGTAAAGATGGGCTCACTGTGTCTCAGTTCCTAGCTCAGATAAAAGATATAGCGGATAAATTCTCGGCCATTAGCGAACCACTGTCATATAGGGACCATCT
AGGCTACATTCTCGAAGGTTTAGGGACCGAATATAACCCGTTTGTGACATCAGTACAAAATTGCACTGATCGCCCATCTCTTGCGGATGTCCGTAGTTTGTTGATTGCGT
ATGAAGTTAGGCTTGAGAAACAAACCTCTGTCGACCAGTTGAATATGGTACGGGCTAATCTAGCTAATTTCTCCTTTTCCAAAACCCAGAAACGAAACCAATCCAATCGT
TCTTCCAATATGCCCAAGCATTCCCCTGTTCCTAGACTACCACAACATTTTCCCTTTCCTCCTCCAATCCCAGTCTTCTTGGCCGACCACAAACCTCTCCTCGTCCATAT
ACTAACTCAACTCGATGGCCTGATAACAACTCAAATCGCCCACAATGTCAGATTTGTGGGAAACTTGGCCATACAACCTTGTGTGCTACAATCAGCACAACCCCCTTTAT
CAAGCTTCTCCACCTCCATCAACTACTTCCCAACCTCCCCATGCTCTCTTCAACCAACTATCTCAGCCATCAACCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAACCTCAAGTTTGTCTTCTTCCGGCCAAGACACTATTCCTGCTCTCCCTACAACCTCAACCGTAATCACAGCTCCCTCCCTTATCTCCACCTTTGTTGTCAC
CACCCATGTTTCGACGCCTGGCCCTTCTCATCGATCTCAACTCAGAGGCTTCACTCTTAATCAATTGCTCAACCACATCTTTGCTTTCGACATGGAAAGTTTAATCAACG
GTACGCATCCTCCTCCTAGATTTCTGGATATTGCGAAAACTCAGGAGCATCTTAGAATTGTTTATGAATCGTCTTCCACTGCTCGTGTTATGGGGTTAAGGTCTCAATTA
CAAAAAATCCGTAAAGATGGGCTCACTGTGTCTCAGTTCCTAGCTCAGATAAAAGATATAGCGGATAAATTCTCGGCCATTAGCGAACCACTGTCATATAGGGACCATCT
AGGCTACATTCTCGAAGGTTTAGGGACCGAATATAACCCGTTTGTGACATCAGTACAAAATTGCACTGATCGCCCATCTCTTGCGGATGTCCGTAGTTTGTTGATTGCGT
ATGAAGTTAGGCTTGAGAAACAAACCTCTGTCGACCAGTTGAATATGGTACGGGCTAATCTAGCTAATTTCTCCTTTTCCAAAACCCAGAAACGAAACCAATCCAATCGT
TCTTCCAATATGCCCAAGCATTCCCCTGTTCCTAGACTACCACAACATTTTCCCTTTCCTCCTCCAATCCCAGTCTTCTTGGCCGACCACAAACCTCTCCTCGTCCATAT
ACTAACTCAACTCGATGGCCTGATAACAACTCAAATCGCCCACAATGTCAGATTTGTGGGAAACTTGGCCATACAACCTTGTGTGCTACAATCAGCACAACCCCCTTTAT
CAAGCTTCTCCACCTCCATCAACTACTTCCCAACCTCCCCATGCTCTCTTCAACCAACTATCTCAGCCATCAACCCCTAA
Protein sequenceShow/hide protein sequence
MASTSSLSSSGQDTIPALPTTSTVITAPSLISTFVVTTHVSTPGPSHRSQLRGFTLNQLLNHIFAFDMESLINGTHPPPRFLDIAKTQEHLRIVYESSSTARVMGLRSQL
QKIRKDGLTVSQFLAQIKDIADKFSAISEPLSYRDHLGYILEGLGTEYNPFVTSVQNCTDRPSLADVRSLLIAYEVRLEKQTSVDQLNMVRANLANFSFSKTQKRNQSNR
SSNMPKHSPVPRLPQHFPFPPPIPVFLADHKPLLVHILTQLDGLITTQIAHNVRFVGNLAIQPCVLQSAQPPLSSFSTSINYFPTSPCSLQPTISAINP