| GenBank top hits | e value | %identity | Alignment |
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| BBN69855.1 transposable element gene [Prunus dulcis] | 4.5e-62 | 64.65 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPTRFI-------IAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIES------------TVEA
VSP Q VPKK G+TVV N+ NEL+PTR I IA EDQEKTTFT P+ TFA++RMPF LCNAPATFQRCM+AIFSDM+E +EA
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPTRFI-------IAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIES------------TVEA
Query: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
F TLK L SAPI+ AP+WSL FE+MCDA+D AIG +LGQK +K+ H I+YASR LN+AQ+NY+TTEKELLA+VFA EKFRPYLVGSKV V++DHA +
Subjt: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
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| GEV44874.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] | 7.5e-57 | 58.16 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPTRFIIAHE-------------------DQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIESTVEA
VSP QCVPKKGG TVV NKDNELIPTR + ++ DQ KTTFT PY TF ++RMPF LCNAP FQRCM+AIF+DMIE T+EA
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPTRFIIAHE-------------------DQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIESTVEA
Query: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHA
F+TLK L APIL AP+W + FE+MCDA+D AIG +LGQ+ DK PI+YAS+ + EA+ NYTTTEKE LA+V+A EKF+ YL+ +K V+TD++
Subjt: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHA
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| GFA47621.1 hypothetical protein [Tanacetum cinerariifolium] | 1.0e-58 | 60.22 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPTRFIIAH-------EDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIESTVEAFETLKAALISAP
VSP CVPKKGG+TV+ N +NEL+PTR + + +DQEKTTFT PY TFA+KRMPF LCNAP TFQRCM+AIF DMIE T+EAF TLK L AP
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPTRFIIAH-------EDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIESTVEAFETLKAALISAP
Query: ILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
IL A NW FE+MCDA+D A+G +LGQ+++K PI+Y S+ +N+ + NYTTTEKE+LA+V+AFEKFR YL+ K V+TDH+ +
Subjt: ILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
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| RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.4e-65 | 40.76 | Show/hide |
Query: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLN-EGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKN
C NH+AL+CWNRFD+ YQ EEIP+ALAAM L+ E DP Y SGAT+H+ NDPGK+S + PYKG D IFVGNG L ISH+G++++ T +L LK
Subjt: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLN-EGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKN
Query: VLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH---------LNEKF-
+LVVPEIKKNL+S+ +LT DN CSI F + F++K++ +++LA+ T+ LYALE+ + + + ++KA +WH RMGH L++KF
Subjt: VLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH---------LNEKF-
Query: --------------------------------------------------------------------TWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
TW+YPL+RKS+F CF KF++++ENQ++++IK
Subjt: --------------------------------------------------------------------TWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
Query: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
+ QSDGGGEF S++ + L + GI+ Q+SCP TP+QNGV E
Subjt: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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| XP_026435521.1 uncharacterized protein LOC113333225 [Papaver somniferum] | 7.7e-54 | 61.38 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPTR-------FIIAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCML---AIFSDMIESTVEAFETLKAALI
VSP Q VPKK G+TVV N+DN+L+PTR +IA EDQEKTTFT P+ TFA++RMPF LCNAPATFQRCM + D + EAF+TLK L
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPTR-------FIIAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCML---AIFSDMIESTVEAFETLKAALI
Query: SAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
+API+ P WS FE+MCD +D A+G +LGQ+ KV + IYYAS LN AQINY+TTEKELLAIVFA EKFR YLVG+KV VF+DHA +
Subjt: SAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9FIQ8 Integrase catalytic domain-containing protein | 3.4e-55 | 38.12 | Show/hide |
Query: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLNEGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNV
C H AL+CWNRF+H++Q+ +IP+ALAA+ L G + +GA++H+ DPG + + PY G DK+ VG+GN L ISH+G ++I +ILKNV
Subjt: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLNEGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNV
Query: LVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKN-RQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH--------LNEK---
L+VP +KKNLIS+S+LT D C + F + FL+K+ + RKILA T+ LY L D H EA +T + ++WH R+GH LN K
Subjt: LVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKN-RQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH--------LNEK---
Query: -------------------------------------------------------------------FTWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
FTWIYPLKRKS+F CF +F+ M+ENQ DKKIK
Subjt: -------------------------------------------------------------------FTWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
Query: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
+ QSDGGGE++ + + L + GI+HQ+SC TP+QNGV E
Subjt: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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| A0A2N9H612 Integrase catalytic domain-containing protein | 3.4e-55 | 38.12 | Show/hide |
Query: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLNEGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNV
C H AL+CWNRF+H++Q+ +IP+ALAA+ L G + +GA++H+ DPG + + PY G DK+ VG+GN L ISH+G ++I +ILKNV
Subjt: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLNEGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNV
Query: LVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKN-RQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH--------LNEK---
L+VP +KKNLIS+S+LT D C + F + FL+K+ + RKILA T+ LY L D H EA +T + ++WH R+GH LN K
Subjt: LVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKN-RQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH--------LNEK---
Query: -------------------------------------------------------------------FTWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
FTWIYPLKRKS+F CF +F+ M+ENQ DKKIK
Subjt: -------------------------------------------------------------------FTWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
Query: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
+ QSDGGGE++ + + L + GI+HQ+SC TP+QNGV E
Subjt: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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| A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-65 | 40.76 | Show/hide |
Query: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLN-EGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKN
C NH+AL+CWNRFD+ YQ EEIP+ALAAM L+ E DP Y SGAT+H+ NDPGK+S + PYKG D IFVGNG L ISH+G++++ T +L LK
Subjt: CFLGNHTALECWNRFDHSYQSEEIPKALAAMNLN-EGVDPLMYAYSGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKN
Query: VLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH---------LNEKF-
+LVVPEIKKNL+S+ +LT DN CSI F + F++K++ +++LA+ T+ LYALE+ + + + ++KA +WH RMGH L++KF
Subjt: VLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKILAKVTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH---------LNEKF-
Query: --------------------------------------------------------------------TWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
TW+YPL+RKS+F CF KF++++ENQ++++IK
Subjt: --------------------------------------------------------------------TWIYPLKRKSEFISCFKKFKLMIENQVDKKIK
Query: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
+ QSDGGGEF S++ + L + GI+ Q+SCP TP+QNGV E
Subjt: VLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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| A0A438H0L2 Reverse transcriptase | 3.7e-54 | 55.92 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPT----------------------RFIIAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIEST
VSP Q VPKK G+TV+ N+ E + T + I ED+EKTTFT P+ TFA++RMPF LCNAPATFQRCML+IFSDM+E
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPT----------------------RFIIAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIEST
Query: VE----------AFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGS
+E +FE LK L +API+ APNW L FEVMCDAND+A+GV+LGQ+ D + IYYAS+ LNEAQ NYTTTEKELLA+VFA +KFR YLVGS
Subjt: VE----------AFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGS
Query: KVTVFTDHATI
+ VFTDH+T+
Subjt: KVTVFTDHATI
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| A0A5H2XVG6 Transposable element protein | 2.2e-62 | 64.65 | Show/hide |
Query: VSPDQCVPKKGGVTVVTNKDNELIPTRFI-------IAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIES------------TVEA
VSP Q VPKK G+TVV N+ NEL+PTR I IA EDQEKTTFT P+ TFA++RMPF LCNAPATFQRCM+AIFSDM+E +EA
Subjt: VSPDQCVPKKGGVTVVTNKDNELIPTRFI-------IAHEDQEKTTFTFPYETFAFKRMPFDLCNAPATFQRCMLAIFSDMIES------------TVEA
Query: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
F TLK L SAPI+ AP+WSL FE+MCDA+D AIG +LGQK +K+ H I+YASR LN+AQ+NY+TTEKELLA+VFA EKFRPYLVGSKV V++DHA +
Subjt: FETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDHATI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.3e-14 | 46.88 | Show/hide |
Query: AFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDH
AF+ LK + PIL P+++ F + DA+DVA+G +L Q HP+ Y SR LNE +INY+T EKELLAIV+A + FR YL+G + +DH
Subjt: AFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDH
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.6e-15 | 44.9 | Show/hide |
Query: VEAFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDH
+EAFE LKA +I PIL P++ F + DA+++A+G +L Q HPI + SR LN+ ++NY+ EKELLAIV+A + FR YL+G + + +DH
Subjt: VEAFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGSKVTVFTDH
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.0e-12 | 40.2 | Show/hide |
Query: ESTVEAFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGS-KVTVFT
E+ +++F LK+ L S+ IL P ++ F + DA++ AIG +L Q PI Y SR LN+ + NY T EKE+LAI+++ + R YL G+ + V+T
Subjt: ESTVEAFETLKAALISAPILCAPNWSLSFEVMCDANDVAIGVMLGQKLDKVIHPIYYASRVLNEAQINYTTTEKELLAIVFAFEKFRPYLVGS-KVTVFT
Query: DH
DH
Subjt: DH
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-25 | 30.07 | Show/hide |
Query: SGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNVLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKI-LAK
SGAT H+ +D +S QPY G D + V +G+ + ISH G + + T L L N+L VP I KNLISV +L N S+ FF F VK+ + L +
Subjt: SGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNVLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKI-LAK
Query: VTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH-----LNE---------------------------------------------------
LY E + + S ++KA +S WH R+GH LN
Subjt: VTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH-----LNE---------------------------------------------------
Query: ---------------------KFTWIYPLKRKSEFISCFKKFKLMIENQVDKKIKVLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
++TW+YPLK+KS+ F FK ++EN+ +I SD GGEF + L E Q GI H S PHTP+ NG+ E
Subjt: ---------------------KFTWIYPLKRKSEFISCFKKFKLMIENQVDKKIKVLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-24 | 29.73 | Show/hide |
Query: SGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNVLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKI-LAK
SGAT H+ +D +S QPY G D + + +G+ + I+H G + + T L L VL VP I KNLISV +L N S+ FF F VK+ + L +
Subjt: SGATSHMVNDPGKVSTLQPYKGLDKIFVGNGNQLEISHVGQSKIVTDDNELILKNVLVVPEIKKNLISVSKLTRDNDCSITFFANDFLVKNRQRKI-LAK
Query: VTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH-----LNE---------------------------------------------------
LY E + + S +KA +S WH R+GH LN
Subjt: VTRTASLYALEDQHSEKNEACVATSTNNKAPYSIWHMRMGH-----LNE---------------------------------------------------
Query: ---------------------KFTWIYPLKRKSEFISCFKKFKLMIENQVDKKIKVLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
++TW+YPLK+KS+ F FK ++EN+ +I L SD GGEF + L++ L Q GI H S PHTP+ NG+ E
Subjt: ---------------------KFTWIYPLKRKSEFISCFKKFKLMIENQVDKKIKVLQSDGGGEFTSLELKELLEQSGIVHQLSCPHTPQQNGVVE
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