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Lag0036645 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036645
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr2:127220..130311
RNA-Seq ExpressionLag0036645
SyntenyLag0036645
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66153.1 hypothetical protein [Beta vulgaris subsp. vulgaris]3.8e-0952.63Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        F W G+  + GM  V+W    LP+ LGG+G+G+  H N ALL KWIWRFL+E +ALW
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
KAA0041081.1 Myb_DNA-bind_6 domain-containing protein [Cucumis melo var. makuwa]1.1e-1157.89Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        FFW+G +G  GMHNV+W T +  +L+GG+GIG+F   N  LL+KWIWRFLH  NAL+
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
KAA0055821.1 uncharacterized protein E6C27_scaffold181G002160 [Cucumis melo var. makuwa]2.4e-1158.93Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENAL
        FFW+G++    MHNV+W T    +L+GG+GIG++   NLALL+KWIWRFLHE NAL
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENAL
TYK12026.1 Homeodomain-like superfamily protein, putative isoform 2 [Cucumis melo var. makuwa]1.1e-1157.89Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        FFW+G +G  GMHNV+W T +  +L+GG+GIG+F   N  LL+KWIWRFLH  NAL+
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
XP_034926097.1 uncharacterized protein LOC118057579 [Populus alba]3.8e-0940Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALWYPSNTFIVKSLIDDLGPNTHVNG
        F W G      + NV W T  +P+  GG+GIGS Q+ N ALL KW+WR+  EE+++W    T I       L P  H+ G
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALWYPSNTFIVKSLIDDLGPNTHVNG
TrEMBL top hitse value%identityAlignment
A0A5A7THE0 Myb_DNA-bind_6 domain-containing protein5.1e-1257.89Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        FFW+G +G  GMHNV+W T +  +L+GG+GIG+F   N  LL+KWIWRFLH  NAL+
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
A0A5A7UQH4 Reverse transcriptase domain-containing protein1.1e-1158.93Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENAL
        FFW+G++    MHNV+W T    +L+GG+GIG++   NLALL+KWIWRFLHE NAL
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENAL
A0A5D3CNM9 Homeodomain-like superfamily protein, putative isoform 25.1e-1257.89Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        FFW+G +G  GMHNV+W T +  +L+GG+GIG+F   N  LL+KWIWRFLH  NAL+
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein4.1e-0948.39Show/hide
Query:  SFFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALWYPSN
        +F W+GS G  G H +NWT    P+  GG+GI   Q  N ALL+KW+WR+  E NALW   N
Subjt:  SFFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALWYPSN
F4NCK1 Reverse transcriptase domain-containing protein1.8e-0952.63Show/hide
Query:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        F W G+  + GM  V+W    LP+ LGG+G+G+  H N ALL KWIWRFL+E +ALW
Subjt:  FFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.3e-0436.21Show/hide
Query:  SFFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
        +F W  +  +   H V W+    P+  GG+G+ + +  N AL+SK  WR L E+N+LW
Subjt:  SFFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALW
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTTTCTGGGAAGGATCTAGAGGTGAGGGTGGTATGCACAATGTTAATTGGACTACTGCACGACTTCCTCAATTGTTGGGTGGCATTGGTATCGGTAGCTTCCA
GCATCACAATTTAGCCCTTTTATCAAAATGGATTTGGAGATTCTTACATGAGGAGAATGCCCTTTGGTATCCATCCAATACTTTTATAGTAAAATCCCTTATAGACGATC
TTGGACCAAATACTCATGTGAATGGTCTCTATAAGGACTCACTTGCTCTCATTTTTGTGGGTCATCCATTTCAGGGAGAAAAGAAGACCTTGTGGCTTGCTTTGAACAAA
GTCTTTCTTTGGATATCCCCTAGGGATAATTGGCAACTCCAAATATTCTTCTCGGACTTTGATGCAATCCTTCTCATTGGGACGAAGGAATATGGCTATGTGAGCACCGA
GACCACCCCACTGCACGCAATATTGTGGTCACCCTCAATGGAATTTAGGTATATGCTAAGAGTTGGAGCTTCTGTCTATCCCGCCATTTCCCCTGGTTGTATCAATGTCA
ATAATAAACTGGTGTCTCGTTGCCTTCTTGGCAAAACTGGACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTTTCTGGGAAGGATCTAGAGGTGAGGGTGGTATGCACAATGTTAATTGGACTACTGCACGACTTCCTCAATTGTTGGGTGGCATTGGTATCGGTAGCTTCCA
GCATCACAATTTAGCCCTTTTATCAAAATGGATTTGGAGATTCTTACATGAGGAGAATGCCCTTTGGTATCCATCCAATACTTTTATAGTAAAATCCCTTATAGACGATC
TTGGACCAAATACTCATGTGAATGGTCTCTATAAGGACTCACTTGCTCTCATTTTTGTGGGTCATCCATTTCAGGGAGAAAAGAAGACCTTGTGGCTTGCTTTGAACAAA
GTCTTTCTTTGGATATCCCCTAGGGATAATTGGCAACTCCAAATATTCTTCTCGGACTTTGATGCAATCCTTCTCATTGGGACGAAGGAATATGGCTATGTGAGCACCGA
GACCACCCCACTGCACGCAATATTGTGGTCACCCTCAATGGAATTTAGGTATATGCTAAGAGTTGGAGCTTCTGTCTATCCCGCCATTTCCCCTGGTTGTATCAATGTCA
ATAATAAACTGGTGTCTCGTTGCCTTCTTGGCAAAACTGGACTGTAG
Protein sequenceShow/hide protein sequence
MSFFWEGSRGEGGMHNVNWTTARLPQLLGGIGIGSFQHHNLALLSKWIWRFLHEENALWYPSNTFIVKSLIDDLGPNTHVNGLYKDSLALIFVGHPFQGEKKTLWLALNK
VFLWISPRDNWQLQIFFSDFDAILLIGTKEYGYVSTETTPLHAILWSPSMEFRYMLRVGASVYPAISPGCINVNNKLVSRCLLGKTGL