; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036658 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036658
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr2:209409..217187
RNA-Seq ExpressionLag0036658
SyntenyLag0036658
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19913.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]3.3e-12796.88Show/hide
Query:  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLEHISDPFHNNILSLLNSS
        PVQNLL+HISDPFHNN LSLLNSS
Subjt:  PVQNLLEHISDPFHNNILSLLNSS

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]2.5e-12795.15Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGPVQNLL+HI+DPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]3.9e-12896.04Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGPVQNLL+HISDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

XP_022936160.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]9.7e-12794.27Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGP+QNLLEH+SDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

XP_038898449.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]6.7e-12895.59Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGV+VIAICQAILMVGPEYARYCGIEALEPLGI+LPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGPVQNLLEHISDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

TrEMBL top hitse value%identityAlignment
A0A0A0L0U5 Chlorophyll a-b binding protein, chloroplastic6.1e-12795.56Show/hide
Query:  TSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
        +SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY
Subjt:  TSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDY

Query:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
        LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK
Subjt:  LGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGK

Query:  GPVQNLLEHISDPFHNNILSLLNSS
        GPVQNLL+HI+DPFHNN LSLLNSS
Subjt:  GPVQNLLEHISDPFHNNILSLLNSS

A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic1.9e-12896.04Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGPVQNLL+HISDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

A0A5D3D8P8 Chlorophyll a-b binding protein, chloroplastic1.6e-12796.88Show/hide
Query:  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGP+PYDYPKYL+GELPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLEHISDPFHNNILSLLNSS
        PVQNLL+HISDPFHNN LSLLNSS
Subjt:  PVQNLLEHISDPFHNNILSLLNSS

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic4.7e-12794.27Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKD AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGP+QNLLEH+SDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic1.4e-12693.83Show/hide
Query:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        K++SWYGE+RPRWLGP+PY+YPKYL+GELPGDYGFDIAGLS+DPVAF+KYFNFEILHARWAMLASLGAL+PEILDIFGAFHFTEPIWWRVGYSKLKGDTL
Subjt:  KNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLS+D AAFEELKVKEIKNGRLAMVAWLGFYSQAALT
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLEHISDPFHNNILSLLNSS
        GKGP+QNLLEH+SDPFHNN LSLLNSS
Subjt:  GKGPVQNLLEHISDPFHNNILSLLNSS

SwissProt top hitse value%identityAlignment
P27489 Chlorophyll a-b binding protein 13, chloroplastic1.8e-5444.92Show/hide
Query:  SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFT
        +NP+R    +G+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP AF K    E++H RWAML +LG + PE+L+ +    F 
Subjt:  SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFT

Query:  EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG
        EP+W++ G        LDYLG P  +L  +Q ++ +   Q +LM   E  R  G+  +        G+  YPGG  FDPL L+ D   F ELKVKEIKNG
Subjt:  EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG

Query:  RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN
        RLAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Subjt:  RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic3.6e-5244.07Show/hide
Query:  SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFT
        ++P+R  A       T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP AF +    E++H RWAML +LG + PE+L  +    F 
Subjt:  SNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFT

Query:  EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG
        EP+W++ G        LDYLG P  +L  +Q ++ +   Q +LM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNG
Subjt:  EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNG

Query:  RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN
        RLAM +  GF+ QA +TGKGP++NL +H+ DP  NN
Subjt:  RLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic1.2e-11480.89Show/hide
Query:  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        ++ WYG+ERPRW GPIPYDYP YL+GELPGDYGFDIAGL KD + F KYFNFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+
Subjt:  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

Query:  KGPVQNLLEHISDPFHNNILSLLNS
        KGPVQNL++H+SDP HNN++++L +
Subjt:  KGPVQNLLEHISDPFHNNILSLLNS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic3.9e-5445.53Show/hide
Query:  NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTE
        NP+R    LG+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F E
Subjt:  NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTE

Query:  PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGR
        P+W++ G        LDYLG P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGR
Subjt:  PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGR

Query:  LAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN
        LAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Subjt:  LAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN

Q9XF87 Chlorophyll a-b binding protein 2.4, chloroplastic1.3e-5250Show/hide
Query:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG
        +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Subjt:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG

Query:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA
          LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA
Subjt:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA

Query:  ALTGKGPVQNLLEHISDPFHNN
         +TGKGP++NL +HI+DP  NN
Subjt:  ALTGKGPVQNLLEHISDPFHNN

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein8.2e-11680.89Show/hide
Query:  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        ++ WYG+ERPRW GPIPYDYP YL+GELPGDYGFDIAGL KD + F KYFNFEILHARWAMLA+LGALIPE+ D+ G FHF EP+WWRVGYSKL+G+TL+
Subjt:  NTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGFY+QAA TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

Query:  KGPVQNLLEHISDPFHNNILSLLNS
        KGPVQNL++H+SDP HNN++++L +
Subjt:  KGPVQNLLEHISDPFHNNILSLLNS

AT2G05070.1 photosystem II light harvesting complex gene 2.21.7e-5248.89Show/hide
Query:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG
        +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Subjt:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG

Query:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA
          LDYLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA
Subjt:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA

Query:  ALTGKGPVQNLLEHISDPFHNNILS
         +TGKGP++NL +H++DP  NN  S
Subjt:  ALTGKGPVQNLLEHISDPFHNNILS

AT2G05100.1 photosystem II light harvesting complex gene 2.11.7e-5248.89Show/hide
Query:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG
        +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Subjt:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG

Query:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA
          LDYLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA
Subjt:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA

Query:  ALTGKGPVQNLLEHISDPFHNNILS
         +TGKGP++NL +H++DP  NN  S
Subjt:  ALTGKGPVQNLLEHISDPFHNNILS

AT3G27690.1 photosystem II light harvesting complex gene 2.38.9e-5450Show/hide
Query:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG
        +TP++  WYG +RP++LGP   + P YL+GE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Subjt:  NTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPIWWRVGYSKLKG

Query:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA
          LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA
Subjt:  DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQA

Query:  ALTGKGPVQNLLEHISDPFHNN
         +TGKGP++NL +HI+DP  NN
Subjt:  ALTGKGPVQNLLEHISDPFHNN

AT5G54270.1 light-harvesting chlorophyll B-binding protein 32.8e-5545.53Show/hide
Query:  NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTE
        NP+R    LG+   T  N  WYG +R ++LGP     P YL+GE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F E
Subjt:  NPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTE

Query:  PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGR
        P+W++ G        LDYLG P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGR
Subjt:  PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGR

Query:  LAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN
        LAM +  GF+ QA +TGKGP++NLL+H+ +P  NN
Subjt:  LAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACCTCATGGTATGGAGAAGAGCGTCCTCGGTG
GCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGT
ACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATC
TGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCA
AGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGT
TTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAA
GCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCAGATGTCTGGTGTTCAAATCCTGTTCGGCAAGACGCTAAACTTGGGGCACAACACAATACACCCAAAAACACCTCATGGTATGGAGAAGAGCGTCCTCGGTG
GCTTGGTCCAATTCCATATGATTATCCAAAATATCTGTCAGGTGAACTGCCGGGTGATTATGGATTCGATATTGCTGGTCTGAGCAAGGATCCCGTGGCTTTCCAGAAGT
ACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTGGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATC
TGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCA
AGCCATTTTGATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCTGGTGGTGTGTTGT
TTGACCCCTTGAACCTGTCCAAGGATACTGCAGCTTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTTGGATTTTACAGTCAA
GCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACACATTTCAGATCCTTTCCACAATAACATTCTTTCCCTGCTCAACTCTTCAAAGTAG
Protein sequenceShow/hide protein sequence
MQADVWCSNPVRQDAKLGAQHNTPKNTSWYGEERPRWLGPIPYDYPKYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFTEPI
WWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDTAAFEELKVKEIKNGRLAMVAWLGFYSQ
AALTGKGPVQNLLEHISDPFHNNILSLLNSSK