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Lag0036659 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036659
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr2:222372..222791
RNA-Seq ExpressionLag0036659
SyntenyLag0036659
Gene Ontology termsGO:0009765 - photosynthesis, light harvesting (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591186.1 Chlorophyll a-b binding protein 7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.7e-4391.82Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF
        MALFQPHTSPSAISSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SSKF
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF

Query:  KALAEEARKD
        KALAE+ARKD
Subjt:  KALAEEARKD
KAG7024072.1 Chlorophyll a-b binding protein 7, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]8.7e-4391.82Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF
        MALFQPHTSPSAISSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SSKF
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF

Query:  KALAEEARKD
        KALAE+ARKD
Subjt:  KALAEEARKD
XP_022936160.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]3.0e-4391.07Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        M MALFQPHTSPSAISSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD
XP_022975375.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita maxima]1.9e-4288.39Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        M MALF PHTSPSA+SSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAG+LIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD
XP_023521109.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-4391.96Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        M MALFQPHTSPSAISSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAEEARKD
Subjt:  KFKALAEEARKD
TrEMBL top hitse value%identityAlignment
A0A1S3BVA0 Chlorophyll a-b binding protein, chloroplastic1.9e-4083.93Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        + MAL QPHT  S+ISSSSASFYG+ LQQLR  TT LNLR++HSI HRSTCRASW+ELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKK +AVANSS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAEEARKD
Subjt:  KFKALAEEARKD
A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic1.9e-4085.45Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF
        MAL QPHT  S+ISSSSASFYG+ LQQLR  TT LNLR++HSI HRSTCRASW+ELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKK +AVANSSKF
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF

Query:  KALAEEARKD
        KALAEEARKD
Subjt:  KALAEEARKD
A0A5D3D8N7 Chlorophyll a-b binding protein of LHCII type 1 isoform X21.9e-4085.45Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF
        MAL QPHT  S+ISSSSASFYG+ LQQLR  TT LNLR++HSI HRSTCRASW+ELAGVLIFSA+PFTAVKAIANSPLGESLQRQLEKKK +AVANSSKF
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKF

Query:  KALAEEARKD
        KALAEEARKD
Subjt:  KALAEEARKD
A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic1.4e-4391.07Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        M MALFQPHTSPSAISSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAGVLIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD
A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic9.3e-4388.39Show/hide
Query:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS
        M MALF PHTSPSA+SSSSASFYGSSLQQLRSRT ALNLRNS SI HR TC ASW+ELAG+LIFSAIPFTAVKAIANSP GESLQRQLEKKKNAAVA SS
Subjt:  MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSS

Query:  KFKALAEEARKD
        KFKALAE+ARKD
Subjt:  KFKALAEEARKD
SwissProt top hitse value%identityAlignment
Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic2.0e-1856.76Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSI-HHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSK
        MALFQ       +SS S+S+  SS+  L  R      RN  ++   RS CRASW+ELAGVL+FSAIPFTAVKAIANS +G SL+R+LE+KK  AV NSS+
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSI-HHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSK

Query:  FKALAEEARKD
        FK+ A+EAR D
Subjt:  FKALAEEARKD
Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein1.4e-1956.76Show/hide
Query:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSI-HHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSK
        MALFQ       +SS S+S+  SS+  L  R      RN  ++   RS CRASW+ELAGVL+FSAIPFTAVKAIANS +G SL+R+LE+KK  AV NSS+
Subjt:  MALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSI-HHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSK

Query:  FKALAEEARKD
        FK+ A+EAR D
Subjt:  FKALAEEARKD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCGCTATTTCAGCCACACACTTCACCTTCTGCAATTTCATCTTCCTCCGCCTCATTCTACGGGAGTTCTCTTCAACAACTCCGTTCGCGAACCACTGCCCT
AAATCTTCGAAACAGCCACTCTATCCATCATCGTTCCACTTGCAGAGCTTCGTGGGAGGAGCTTGCGGGGGTTCTGATATTCTCCGCAATCCCCTTCACGGCTGTGAAAG
CCATCGCCAATAGCCCACTCGGAGAGTCGCTCCAGAGGCAATTGGAAAAGAAGAAAAATGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGA
AAAGATAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCGCTATTTCAGCCACACACTTCACCTTCTGCAATTTCATCTTCCTCCGCCTCATTCTACGGGAGTTCTCTTCAACAACTCCGTTCGCGAACCACTGCCCT
AAATCTTCGAAACAGCCACTCTATCCATCATCGTTCCACTTGCAGAGCTTCGTGGGAGGAGCTTGCGGGGGTTCTGATATTCTCCGCAATCCCCTTCACGGCTGTGAAAG
CCATCGCCAATAGCCCACTCGGAGAGTCGCTCCAGAGGCAATTGGAAAAGAAGAAAAATGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGA
AAAGATAGGTAA
Protein sequenceShow/hide protein sequence
MAMALFQPHTSPSAISSSSASFYGSSLQQLRSRTTALNLRNSHSIHHRSTCRASWEELAGVLIFSAIPFTAVKAIANSPLGESLQRQLEKKKNAAVANSSKFKALAEEAR
KDR