| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033701.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa] | 1.1e-20 | 34.33 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
MTQK IE RLD ++ ++E I+KE+ ++P +E+ K+ AM+ + +P SS++T S+ K K R VD G
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------RGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHL
G G +R+KFKK+EMPVF G+D D W+ R + Y +GLE A FLA+KQE +V EY + E L APLP +
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------RGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHL
Query: SEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
+EDVL F+NG D VI+ V GL +M
Subjt: SEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
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| KAA0062661.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.2e-18 | 31.84 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
M Q RIE RL+ D ++ ++KE+ K+PAIE + ++S+ E L + S+ S E+ S+KGKE+E S K +G+ +
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
+ +K T ++R KFKKVEMPVF G+D DSWL + DG YR EE + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
FL +KQETTV EY + L+APL + EDV++ TF+NG I+A V GL +M++ L+
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
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| TYK01195.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.2e-18 | 31.84 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
M Q RIE RL+ D ++ ++KE+ K+PAIE + ++S+ E L + S+ S E+ S+KGKE+E S K +G+ +
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
+ +K T ++R KFKKVEMPVF G+D DSWL + DG YR EE + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
FL +KQETTV EY + L+APL + EDV++ TF+NG I+A V GL +M++ L+
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
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| TYK01454.1 uncharacterized protein E5676_scaffold772G00470 [Cucumis melo var. makuwa] | 9.0e-20 | 36.44 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRT----KPSSSDITEASSSKGKEREGSAMKET---KNQGVDA
M Q RIE R ++ D ++ GI+KE+ KLPAIE + +++ E+ + L M+ + RT + S S E+ +KGKE E ++ K +N G D
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRT----KPSSSDITEASSSKGKEREGSAMKET---KNQGVDA
Query: SPSVTCGSVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGYRGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRD
KK I T ++R KFKKVEMP+F DD DSWL R + G FL +KQE TV EY + L+APL + E+V+K TF+NG
Subjt: SPSVTCGSVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGYRGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRD
Query: SVIKAAVQCWETSGLHTVMKMLGLM
I+A V + L +M++ L+
Subjt: SVIKAAVQCWETSGLHTVMKMLGLM
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| TYK17386.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa] | 2.9e-18 | 30.65 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
MTQK IE RLD ++ ++E I+KE+ ++P +E+ K+ AM+ + +P SS++T S+ K K R VD G
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------------RGLEECEPFAGW---------------------
G G +R+KFKK+EMPVF G+D D W+ R + Y R E + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------------RGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
FLA+KQE +V EY + E L APLP ++EDVL F NG D VI+ V GL +M
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SW87 Gypsy/ty3 element polyprotein | 5.1e-21 | 34.33 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
MTQK IE RLD ++ ++E I+KE+ ++P +E+ K+ AM+ + +P SS++T S+ K K R VD G
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------RGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHL
G G +R+KFKK+EMPVF G+D D W+ R + Y +GLE A FLA+KQE +V EY + E L APLP +
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------RGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHL
Query: SEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
+EDVL F+NG D VI+ V GL +M
Subjt: SEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
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| A0A5A7VAG8 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-18 | 31.84 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
M Q RIE RL+ D ++ ++KE+ K+PAIE + ++S+ E L + S+ S E+ S+KGKE+E S K +G+ +
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
+ +K T ++R KFKKVEMPVF G+D DSWL + DG YR EE + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
FL +KQETTV EY + L+APL + EDV++ TF+NG I+A V GL +M++ L+
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
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| A0A5D3BPU7 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-18 | 31.84 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
M Q RIE RL+ D ++ ++KE+ K+PAIE + ++S+ E L + S+ S E+ S+KGKE+E S K +G+ +
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
+ +K T ++R KFKKVEMPVF G+D DSWL + DG YR EE + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRD----------------------DG-----YRGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
FL +KQETTV EY + L+APL + EDV++ TF+NG I+A V GL +M++ L+
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVMKMLGLM
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| A0A5D3BQK3 Reverse transcriptase domain-containing protein | 4.3e-20 | 36.44 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRT----KPSSSDITEASSSKGKEREGSAMKET---KNQGVDA
M Q RIE R ++ D ++ GI+KE+ KLPAIE + +++ E+ + L M+ + RT + S S E+ +KGKE E ++ K +N G D
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRT----KPSSSDITEASSSKGKEREGSAMKET---KNQGVDA
Query: SPSVTCGSVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGYRGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRD
KK I T ++R KFKKVEMP+F DD DSWL R + G FL +KQE TV EY + L+APL + E+V+K TF+NG
Subjt: SPSVTCGSVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGYRGLEECEPFAGWFLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRD
Query: SVIKAAVQCWETSGLHTVMKMLGLM
I+A V + L +M++ L+
Subjt: SVIKAAVQCWETSGLHTVMKMLGLM
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| A0A5D3D378 Gypsy/ty3 element polyprotein | 1.4e-18 | 30.65 | Show/hide |
Query: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
MTQK IE RLD ++ ++E I+KE+ ++P +E+ K+ AM+ + +P SS++T S+ K K R VD G
Subjt: MTQKRIEVRLDVTDTDLEGIEKEMHKLPAIERNPTKLSQTSEETVKALAMIASEMVHWRTKPSSSDITEASSSKGKEREGSAMKETKNQGVDASPSVTCG
Query: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------------RGLEECEPFAGW---------------------
G G +R+KFKK+EMPVF G+D D W+ R + Y R E + F W
Subjt: SVKKGAIGGTGSERLKFKKVEMPVFGGDDLDSWLLRDDGY---------------------------RGLEECEPFAGW---------------------
Query: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
FLA+KQE +V EY + E L APLP ++EDVL F NG D VI+ V GL +M
Subjt: -FLAVKQETTVREYWKALELLMAPLPHLSEDVLKTTFLNGRDSVIKAAVQCWETSGLHTVM
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