CuGenDBv2

Gene ID	Lag0036661
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr2:232592..235131
RNA-Seq Expression	Lag0036661
Synteny	Lag0036661
Gene Ontology terms	GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

BBH07150.1 TatD related DNase [Prunus dulcis]

1.1e-24

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

BBN69274.1 TatD related DNase [Prunus dulcis]

1.1e-24

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]

8.5e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K ++++V  EF  N + NK TNETYICLIPKK  S KV D R ISLITS YK+IAKVLA RL++ L+ TISG Q AFI+GRQI+DA+LVA + V++
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R + ++  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]

1.1e-24

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]

1.1e-24

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

TrEMBL top hits

e value

%identity

Alignment

A0A2P6QQZ3 Putative RNA-directed DNA polymerase

4.1e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K ++++V  EF  N + NK TNETYICLIPKK  S KV D R ISLITS YK+IAKVLA RL++ L+ TISG Q AFI+GRQI+DA+LVA + V++
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R + ++  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

A0A4Y1RS61 TatD related DNase

5.4e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)

5.4e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

A0A5H2XQW2 TatD related DNase

5.4e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV D R ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +N K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

M5VS59 Reverse transcriptase domain-containing protein (Fragment)

2.4e-25

54.92

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Query:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED
        W ++K D+++V Q+FFQ+ I N  TNET+ICLIPKK  S KV DNR ISL+TS YK+I+KVLA RL++ L  TIS  Q AF+Q RQI+DA+LVA + VE+
Subjt:  WNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVED

Query:  YRVRNEKDFLLKDKVSLEKAYD
         R +  K  +   K+  EKAYD
Subjt:  YRVRNEKDFLLKDKVSLEKAYD

SwissProt top hits

e value

%identity

Alignment

P14381 Transposon TX1 uncharacterized 149 kDa protein

4.6e-05

30.85

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Query:  YWNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILV
        +W+ L PD   V  E F+            + L+PKK     +++ R +SL+++ YK++AK ++ RLK  LA  I   Q+  + GR I D + +
Subjt:  YWNILKPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILV

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATTAATGACAGCAATTGCAATGTGAAAGATGATGTACAGCAGCTGCTGGGATCGTCAAATATCAGTTCTGAAAATGGGTTAATTCAGTCCAAGGATTTTAAGGAATT
GTCTGACCAAATTCCAAGGGAGAGAGACCATTTTAATGAGGTGTTGGGTTCTCCAAAAGATGTTAATGCTATTAATAGTCTCTCTCCTTCTAAAGATGTTGATGCTATTA
ATGAGGCGTTGGGTCCTGAAGTTCAGCCGCCCCATATTTATGAAACTCCTTCCAAGAATTTTAATGTCGTTACTTGCAATTTAAATAAGGATGTCCAACAGGTAACATTA
AAGACCTATTCTCGAAAAAAGGCTTCTCATTCATTGGCTGTTAAGTCTAACATTAATGCTGATCAATTGGAAGCTGAATGCACTCATTTAATTGTTGCAAATAAGGCTGT
GGGATCTTCAAATGTCAGTGCTGGAAATGGGTTGTTTCAGGCCAAGGAATTTAAAGAATCTTCTGTTCGAATTCCAGGGGGGAGTAATATTTTCATCAGAGGTATTGGCA
ATTCTATAAACATAGTACTCATTCTCCGGTGGAATCAGACGATGAGTCTACTGTTAGTATCATCTCCTTCATCAAGTCTATCTGTGACCTTGAATTTGGAGAGGTCACCT
GTTGTTTCTTCTAGTTTGTGTTTTAGGTTGTTGCTGATTTTCTGTTGTTATGGTGGATTTGAGGATCAATTCCTAGAAGAATCTATCAATATGGGGTCCATTTGTTTCTC
CGGGAAAGATTTATTTTGGTTTGCCGAAGCTTCTAGTCTCAAGTGCATTGGGATGCATGCGGATGGATATGGTATCATGGGATCAGTTTTTGGAGGAAAATTTTTGGGAT
TCTTCAGATGCCAGTTATTATCAAAGCCATTCAGCATTTGGATAGTTGGTAATTGGGTTGGGTACCCTATCCTGGGGACACTATGGACGCGACATTATTGGAACATCTTG
AAGCCGGATATAGTAGAGGTGTTCCAAGAATTTTTCCAAAACGACATTAATAATAAGAAAACCAACGAAACCTACATATGTCTAATTCCTAAGAAGAAAAAATCCTCCAA
AGTAAGGGACAATAGACAAATAAGCTTGATCACCTCTCCTTACAAGCTGATTGCTAAGGTGCTGGCCGAAAGGTTAAAAAAAGCCCTTGCGCTAACCATCAGTGGCTGTC
AGGCGGCCTTCATTCAGGGAAGACAAATTATTGATGCTATTTTAGTAGCAACTAAAGCAGTGGAAGATTATAGAGTTAGAAATGAGAAAGACTTCTTACTCAAAGACAAA
GTAAGTCTTGAGAAGGCTTATGACATCAACTGA

mRNA sequence

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Protein sequence

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MINDSNCNVKDDVQQLLGSSNISSENGLIQSKDFKELSDQIPRERDHFNEVLGSPKDVNAINSLSPSKDVDAINEALGPEVQPPHIYETPSKNFNVVTCNLNKDVQQVTL
KTYSRKKASHSLAVKSNINADQLEAECTHLIVANKAVGSSNVSAGNGLFQAKEFKESSVRIPGGSNIFIRGIGNSINIVLILRWNQTMSLLLVSSPSSSLSVTLNLERSP
VVSSSLCFRLLLIFCCYGGFEDQFLEESINMGSICFSGKDLFWFAEASSLKCIGMHADGYGIMGSVFGGKFLGFFRCQLLSKPFSIWIVGNWVGYPILGTLWTRHYWNIL
KPDIVEVFQEFFQNDINNKKTNETYICLIPKKKKSSKVRDNRQISLITSPYKLIAKVLAERLKKALALTISGCQAAFIQGRQIIDAILVATKAVEDYRVRNEKDFLLKDK
VSLEKAYDIN

Lag0036661 (gene) of Sponge gourd (AG-4) v1 genome