CuGenDBv2

Gene ID	Lag0036672
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein TOPLESS
Genome location	chr2:303869..309554
RNA-Seq Expression	Lag0036672
Synteny	Lag0036672
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0048731 - system development (biological process)
InterPro domains	IPR027728 - Topless family

Homology

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GenBank top hits

e value

%identity

Alignment

RAL41375.1 hypothetical protein DM860_010169 [Cuscuta australis]

4.5e-12

42.65

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Query:  PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIG--VNLPVNVLPVSFADHGH------------DLPKTVMR
        P  N   V    + S GP  LC    PA + +    +   V    + + +++  P    IG  VNLPVNV+PVSF  HGH            DLPKTV+R
Subjt:  PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIG--VNLPVNVLPVSFADHGH------------DLPKTVMR

Query:  TSNQGSSPMCMDFHLVQQTLLLISMLIYTNSGSAIL
        T NQGSSPM MDFH VQQTLLL+     TN G   L
Subjt:  TSNQGSSPMCMDFHLVQQTLLLISMLIYTNSGSAIL

TYK29594.1 protein TOPLESS [Cucumis melo var. makuwa]

2.9e-11

68.33

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI
        VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI

XP_022153396.1 protein TOPLESS [Momordica charantia]

1.3e-11

71.43

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Query:  PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        PIG    VNLPVNVLPVSFA HGH        DLPKTV+RT NQGSSPM MDFH VQQTLLL+
Subjt:  PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

XP_023523502.1 protein TOPLESS [Cucurbita pepo subsp. pepo]

2.9e-11

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFH VQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

XP_038896551.1 protein TOPLESS [Benincasa hispida]

1.7e-11

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPKTVMRT NQGS+PM MDFH VQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BY14 protein TOPLESS

1.4e-11

68.33

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI
        VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI

A0A328D6M3 Uncharacterized protein

2.2e-12

42.65

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Query:  PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIG--VNLPVNVLPVSFADHGH------------DLPKTVMR
        P  N   V    + S GP  LC    PA + +    +   V    + + +++  P    IG  VNLPVNV+PVSF  HGH            DLPKTV+R
Subjt:  PIANQLGVGYSALVSDGPEHLCVG--PAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIG--VNLPVNVLPVSFADHGH------------DLPKTVMR

Query:  TSNQGSSPMCMDFHLVQQTLLLISMLIYTNSGSAIL
        T NQGSSPM MDFH VQQTLLL+     TN G   L
Subjt:  TSNQGSSPMCMDFHLVQQTLLLISMLIYTNSGSAIL

A0A5A7TRI4 Protein TOPLESS

1.4e-11

68.33

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI
        VNLPVNVLPVSFA HGH        DLPKTVMRT NQGSSP  MDFH +QQTLLL+  ++
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLISMLI

A0A6J1DKI7 protein TOPLESS

6.3e-12

71.43

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Query:  PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        PIG    VNLPVNVLPVSFA HGH        DLPKTV+RT NQGSSPM MDFH VQQTLLL+
Subjt:  PIG----VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

A0A6J1KEV5 protein TOPLESS-like

1.4e-11

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Query:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFH VQQTLLL+
Subjt:  VNLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

SwissProt top hits

e value

%identity

Alignment

Q0WV90 Topless-related protein 1

4.1e-08

56.9

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        V+L VN+LP++F    HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

Q10NY2 Protein TPR3

2.6e-07

55.93

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Query:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        PV     VNLPVN+LPV++   H +   D  K V RT +QGS+PM MDFH VQQTLLL+
Subjt:  PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

Q27GK7 Topless-related protein 4

2.2e-06

52.73

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Query:  NLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        NLPVNVLPV++    H        DLPK V R  +QGS+   MDFH VQQT+LL+
Subjt:  NLPVNVLPVSFADHGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

Q94AI7 Protein TOPLESS

2.8e-09

60.34

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

Arabidopsis top hits

e value

%identity

Alignment

AT1G15750.1 Transducin family protein / WD-40 repeat family protein

2.0e-10

60.34

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

AT1G15750.2 Transducin family protein / WD-40 repeat family protein

2.0e-10

60.34

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

AT1G15750.3 Transducin family protein / WD-40 repeat family protein

2.0e-10

60.34

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

AT1G15750.4 Transducin family protein / WD-40 repeat family protein

2.0e-10

60.34

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        VNL VN+LP+SF+   HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

AT1G80490.1 TOPLESS-related 1

2.9e-09

56.9

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Query:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI
        V+L VN+LP++F    HGH        DLPKTV RT +QGSSPM MDFH ++QTLLL+
Subjt:  VNLPVNVLPVSFAD--HGH--------DLPKTVMRTSNQGSSPMCMDFHLVQQTLLLI

Sequences

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CDS sequence

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ATGGCTGAGCGAATGATGCAAGATCTGACAGCTCTTGATCAAAGTCATCTCTCATCTCTTGGAGACCTTGAGGTCACCAGAGAAATCATATACATCATCCAAGCGCCCGA
GGAAGAATTTCACAAGTACTGGGATCACTTCAATGAGTTATGTGCGCTTCCTCATCGCCCACTATACGAGGAGTCCTTACTTTGCACTTCATTGAGCGTATGTTGGACTC
ATCATATGGCATACACGAAAGGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTCGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAG
TTAGATTTTGTAATTCCAATAGCTAACCAGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGCCCTGAGCATCTGTGCGTCGGGCCAGCGTTTGTGCTTAATGTTGG
GTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCCG
TATCATTTGCTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACATCAAACCAAGGGTCATCTCCAATGTGCATGGATTTTCATCTAGTCCAACAAACTCTGCTA
TTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACTGCTATGGAAATAGACGCGAACTGATTCAACCGGCAAGATG
GTTTATTCTCGTACAATCACATGCTCCTGTGTCAAATATTGATCAAGTTGTGATTGCTATACAAAAAGGCCTATCGGTGTCGGGAAAGATGGAGAAGGGATATGATATCA
CCCTGGTCGAACAAAAAGCCATCCAAATCACTTTCGAATATGTCTCGAAAGCTGATGCAAAGGTGCGCTGCTGA

mRNA sequence

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Protein sequence

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MAERMMQDLTALDQSHLSSLGDLEVTREIIYIIQAPEEEFHKYWDHFNELCALPHRPLYEESLLCTSLSVCWTHHMAYTKGEMEIVDELALVDSMSISISPELTSPKLHE
LDFVIPIANQLGVGYSALVSDGPEHLCVGPAFVLNVGCLSCLRVGLECLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKTVMRTSNQGSSPMCMDFHLVQQTLL
LISMLIYTNSGSAILALASNAFHCYGNRRELIQPARWFILVQSHAPVSNIDQVVIAIQKGLSVSGKMEKGYDITLVEQKAIQITFEYVSKADAKVRC

Lag0036672 (gene) of Sponge gourd (AG-4) v1 genome