; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036675 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036675
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:322102..328192
RNA-Seq ExpressionLag0036675
SyntenyLag0036675
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAS55787.1 hypothetical protein [Oryza sativa Japonica Group]1.5e-3628.54Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------
        GKEILI+A +QAI  Y M  FK P ++ DE+ KM   FWWG   G+ + HW +W  L  +K  GGLGFRD KLF QA+L +  W                
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------

Query:  -----------------APT-----------------RVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI
                         +PT                 R+ N    R+       R L +R +  + + + K V ++I + G W + K+ + F  ID + I
Subjt:  -----------------APT-----------------RVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI

Query:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNKSIHS------------
               R  ED I W  ++   FSV SAY+LA QL++ N  SSS+++  NK+W   WK     K +I   R  +++     NK   +            
Subjt:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNKSIHS------------

Query:  NSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKRPELKTLRSHE--RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKK-SWP
          +   +++ R +  +     +E   Y  S    K   +K     E  RW  P     KLN D S+    + GGIG ILR+   + I    + +   S P
Subjt:  NSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKRPELKTLRSHE--RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKK-SWP

Query:  IKILEHIPSVGFE-GDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLA
        ++   H    G         +PI VE+D S+VI +LN   +D S ++   +E   L    ++I      R++NV +  LA
Subjt:  IKILEHIPSVGFE-GDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLA

ABA98898.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]2.2e-3537.61Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWA------PTRVSNMEE
        GKEILI+A +QAI  Y M  FKLP ++CDE+ K+   FWWG  KGK KAHW SW  +   K  GGLGFRD +LF QA+LA+  W          +    +
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWA------PTRVSNMEE

Query:  HRLGARSLQKRIPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH
          L     ++ I  + + + K V +++D  G+W  + + + F  +D E I +     R  ED I W  ++   FS+ SAY LA QL+N  E+SSS+    
Subjt:  HRLGARSLQKRIPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH

Query:  NKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNK
         K W + WK     K K+   R I++     +NK
Subjt:  NKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNK

EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica Group]9.3e-4228.71Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------
        GKE+LI+A +QAI  Y M  FKLP ++ D++ K+   FWW    G+ K HW +W  L   K  GGLGFRD +LF QA+LA+  W                
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------

Query:  -----------------APT-----------------RVSNMEEHRLGARSLQKRIPVEDDLKGKK------VQEIIDDQGNWIAEKVLENFTIIDVETI
                         +P                  RV N    R+   S   R      + GK       V ++I + G+W   K+ + F  +D E I
Subjt:  -----------------APT-----------------RVSNMEEHRLGARSLQKRIPVEDDLKGKK------VQEIIDDQGNWIAEKVLENFTIIDVETI

Query:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH-------------THFVGLNKSIH
        +N     R  ED I W  ++  +FSV SAY+LA QL N  E+SSS   + NKAW   WK +   K KI   R  ++              ++   N+ IH
Subjt:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH-------------THFVGLNKSIH

Query:  SNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKR----------PELKTLRSHER-WRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQR
          S P   +  R I+  +DL      +      +GK           P+ + L +H+  W  P     KLN D S+      GG+G ILR+S+   I   
Subjt:  SNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKR----------PELKTLRSHER-WRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQR

Query:  FKQIKKSWPIKILEHIPSVGFEGDDL----ISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPP
         K +++      LE       EG  L      +PI VE+D ++V+ +L G   D S ++  I E   L    + I      R++N  +  LA T      
Subjt:  FKQIKKSWPIKILEHIPSVGFEGDDL----ISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPP

Query:  LFSVLSSPPIMDEGTGFWVGYPPIWVKNLLNEN
                   D   GFW+G     + +LL+EN
Subjt:  LFSVLSSPPIMDEGTGFWVGYPPIWVKNLLNEN

KAF5481481.1 hypothetical protein F2P56_002126 [Juglans regia]9.0e-3730.18Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRL---
        G+E+LI+A   +I TY MSCFKLP +LC E+  + A+FWWG+ K +N+  WISWRKLC SK   G+GF+DL+ F  A+LAK  W   +  +   H++   
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRL---

Query:  -----GARSL----------QKRIPVEDDLK----GKKVQEIIDDQGN-WIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLA
               +++           K +P  D +       KV E+ID   N W  EKV       +   ++N       R D ++W  E+  +FSV SAY+L 
Subjt:  -----GARSL----------QKRIPVEDDLK----GKKVQEIIDDQGN-WIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLA

Query:  YQLSNPNEASSSTAASHNKAWRNFW----------KSRAIPKAKICDTRGINHTHFVGLNKSIHSNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGK
               ++    +++ N   R+F           KS  +    +C   G+ +      NK ++ N K    S  +AI+ +L L + E  S    Q+RG 
Subjt:  YQLSNPNEASSSTAASHNKAWRNFW----------KSRAIPKAKICDTRGINHTHFVGLNKSIHSNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGK

Query:  RPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFK-QIKKSWPIKILEHIPSVGFEGDDLISV-PIFVESDTSNVINILN
         P+        RW+PP     KLN D +   ++   G+G +LRD     +    K +   S PI+I       G +    + +  + VESD+  V+  LN
Subjt:  RPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFK-QIKKSWPIKILEHIPSVGFEGDDLISV-PIFVESDTSNVINILN

Query:  GEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLAR
         E E +S     + EI R+ ++F ++   +  R  N  A CLAR
Subjt:  GEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLAR

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.8e-3726.37Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRL---
        GKEILI+A  QA+  Y MS FKLP  LC++I K  ARFWWG  K K+  HW  W  +  +K RGGLGFRDL  F QA++AK  W   R  N    R+   
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRL---

Query:  --------------------------GARSLQK--RIPVEDDLKGKK----------------------------VQEIIDDQGNWIAEKVLENFTIIDV
                                  G++ ++K  R  + D   GKK                            V ++ID +  W  +++ ++F   D+
Subjt:  --------------------------GARSLQK--RIPVEDDLKGKK----------------------------VQEIIDDQGNWIAEKVLENFTIIDV

Query:  ETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH-----------NKA----WR----------NFWKSRAI--PKAKICD
        E I+         EDE++W  ++K  +SV S YQLA   + PNE  SS ++S             K     WR          N WK R++  P  + C 
Subjt:  ETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH-----------NKA----WR----------NFWKSRAI--PKAKICD

Query:  TRGINHTHFV----------GLNKSIHSNSKPNNNSMLRAIE--------------------------------RSLDLR--EVEPNSYPNSQQRGKRP-
         +    +H +           L   I   SK +N     AI+                                +  D R    + +S   + QR  +P 
Subjt:  TRGINHTHFV----------GLNKSIHSNSKPNNNSMLRAIE--------------------------------RSLDLR--EVEPNSYPNSQQRGKRP-

Query:  ----ELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPIKILE-HIPSVGFE-GDDLISVPIFVESDTSNVINI
                    ++W+PPS N  KLN DA+ S + +  G+G I+RD+    +    KQ +    + + E      G +  + + S  + VESD   V+ +
Subjt:  ----ELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPIKILE-HIPSVGFE-GDDLISVPIFVESDTSNVINI

Query:  LNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPPLFSVLSSPPIMDEGTGFWVGYPPIWVKNLLN
        LN      ++I + + ++ R   +FK++ F + PR  N  A  LA+                + +  T  WVG  P  V+N+LN
Subjt:  LNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPPLFSVLSSPPIMDEGTGFWVGYPPIWVKNLLN

TrEMBL top hitse value%identityAlignment
A0A2N9J7E4 Uncharacterized protein6.3e-3627.54Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRLGAR
        G+EILI+A VQAI TYTM+CFKLP  LC EI  +  RFWWG+   K K HW+ W KLC SK  GGLGFRDL+ F  A+LAK  W     +N   +R+ + 
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRLGAR

Query:  SLQKR---IPVEDDLKGK-------KVQEIIDD---------------QGNWIAE----KVLENFTII--DVETIINTPTGGRDREDEIIWSKERKEVFS
            +   +   +  +G        K +++I                   NW+ +    +VL     +  D  TI+  P   R +ED+I W   R   +S
Subjt:  SLQKR---IPVEDDLKGK-------KVQEIIDD---------------QGNWIAE----KVLENFTII--DVETIINTPTGGRDREDEIIWSKERKEVFS

Query:  VNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH----------------------------THFVGLNKSIHSNSKPNNNSM
        V S Y+L  + +   +A SS     +  W+  W +R   K K    R  +                             T ++  NK  H    P ++  
Subjt:  VNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH----------------------------THFVGLNKSIHSNSKPNNNSM

Query:  LRAIERS-LDLREVEPNSYPNSQQRGKRPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPIKILEHIP---
         +   R+ + L+E    +     ++   P+        RWR P  N +K+N D +   +  SGGIG ++RD +  +I    +++     ++++E +    
Subjt:  LRAIERS-LDLREVEPNSYPNSQQRGKRPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPIKILEHIP---

Query:  SVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLAR
        ++ F  +  I   + VE D  N+I  LN  +   +     IE+   +   F+ I   +  R+ N  A  LAR
Subjt:  SVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLAR

B8BN96 Reverse transcriptase domain-containing protein4.5e-4228.71Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------
        GKE+LI+A +QAI  Y M  FKLP ++ D++ K+   FWW    G+ K HW +W  L   K  GGLGFRD +LF QA+LA+  W                
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------

Query:  -----------------APT-----------------RVSNMEEHRLGARSLQKRIPVEDDLKGKK------VQEIIDDQGNWIAEKVLENFTIIDVETI
                         +P                  RV N    R+   S   R      + GK       V ++I + G+W   K+ + F  +D E I
Subjt:  -----------------APT-----------------RVSNMEEHRLGARSLQKRIPVEDDLKGKK------VQEIIDDQGNWIAEKVLENFTIIDVETI

Query:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH-------------THFVGLNKSIH
        +N     R  ED I W  ++  +FSV SAY+LA QL N  E+SSS   + NKAW   WK +   K KI   R  ++              ++   N+ IH
Subjt:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINH-------------THFVGLNKSIH

Query:  SNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKR----------PELKTLRSHER-WRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQR
          S P   +  R I+  +DL      +      +GK           P+ + L +H+  W  P     KLN D S+      GG+G ILR+S+   I   
Subjt:  SNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKR----------PELKTLRSHER-WRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQR

Query:  FKQIKKSWPIKILEHIPSVGFEGDDL----ISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPP
         K +++      LE       EG  L      +PI VE+D ++V+ +L G   D S ++  I E   L    + I      R++N  +  LA T      
Subjt:  FKQIKKSWPIKILEHIPSVGFEGDDL----ISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPP

Query:  LFSVLSSPPIMDEGTGFWVGYPPIWVKNLLNEN
                   D   GFW+G     + +LL+EN
Subjt:  LFSVLSSPPIMDEGTGFWVGYPPIWVKNLLNEN

Q2QNX8 Retrotransposon protein, putative, unclassified1.1e-3537.61Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWA------PTRVSNMEE
        GKEILI+A +QAI  Y M  FKLP ++CDE+ K+   FWWG  KGK KAHW SW  +   K  GGLGFRD +LF QA+LA+  W          +    +
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWA------PTRVSNMEE

Query:  HRLGARSLQKRIPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH
          L     ++ I  + + + K V +++D  G+W  + + + F  +D E I +     R  ED I W  ++   FS+ SAY LA QL+N  E+SSS+    
Subjt:  HRLGARSLQKRIPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASH

Query:  NKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNK
         K W + WK     K K+   R I++     +NK
Subjt:  NKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNK

Q75M12 Reverse transcriptase domain-containing protein7.5e-3728.54Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------
        GKEILI+A +QAI  Y M  FK P ++ DE+ KM   FWWG   G+ + HW +W  L  +K  GGLGFRD KLF QA+L +  W                
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------

Query:  -----------------APT-----------------RVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI
                         +PT                 R+ N    R+       R L +R +  + + + K V ++I + G W + K+ + F  ID + I
Subjt:  -----------------APT-----------------RVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI

Query:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNKSIHS------------
               R  ED I W  ++   FSV SAY+LA QL++ N  SSS+++  NK+W   WK     K +I   R  +++     NK   +            
Subjt:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGINHTHFVGLNKSIHS------------

Query:  NSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKRPELKTLRSHE--RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKK-SWP
          +   +++ R +  +     +E   Y  S    K   +K     E  RW  P     KLN D S+    + GGIG ILR+   + I    + +   S P
Subjt:  NSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKRPELKTLRSHE--RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKK-SWP

Query:  IKILEHIPSVGFE-GDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLA
        ++   H    G         +PI VE+D S+VI +LN   +D S ++   +E   L    ++I      R++NV +  LA
Subjt:  IKILEHIPSVGFE-GDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLA

Q8S5K1 Putative retroelement1.4e-3527.49Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------
        GKEILI+A +QA+  Y M  FKLP ++C+E+ K+   FWWG  KG  + HW SW  L   K +GG+GFRD +LF QA+LA+  W                
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW----------------

Query:  -----------------AP-----------------TRVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI
                         +P                  R+ N +  RL       RS  +R I  + + + + V ++ID  G+W  +K+ ++F  +D E I
Subjt:  -----------------AP-----------------TRVSNMEEHRLG-----ARSLQKR-IPVEDDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETI

Query:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAK-ICDTRGINHTHFVGL-----------------
        +N     R  +D I W  ++   FSV SAY LA  L++ +E SSS+   +++AW   WK  A  K   + + R  +    + L                 
Subjt:  INTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAK-ICDTRGINHTHFVGL-----------------

Query:  ------NKSIHSNSKPNNNSMLRAIER-SLDLREVE--PNSYPNSQQRGKRPELKTLRSHERWRPPSVNAW--------KLNTDASWSGQKKSGGIGWIL
              N+ +H    P      R IE   L L E++  P + P   +       K L S +R R P  + W        KLN D S+      GGIG +L
Subjt:  ------NKSIHSNSKPNNNSMLRAIER-SLDLREVE--PNSYPNSQQRGKRPELKTLRSHERWRPPSVNAW--------KLNTDASWSGQKKSGGIGWIL

Query:  RDSSWSSI---CQRFKQIKKSWPIKILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADC
        R+ +   I   C        +   ++L     +       + +PI +E+D   +I++        S+++F I EI+ L    ++I F  C R++N  +  
Subjt:  RDSSWSSI---CQRFKQIKKSWPIKILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADC

Query:  LA
        LA
Subjt:  LA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.4e-0829.63Show/hide
Query:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRLGAR
        G+  L +A + ++  ++MS   LP ++ + ++++   F WG    K K H + W K+C  K  GGLG R  K   +A+++K+ W   +    E++ L   
Subjt:  GKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRLGAR

Query:  SLQKRIPV
         LQK+  V
Subjt:  SLQKRIPV

P93295 Uncharacterized mitochondrial protein AtMg003102.9e-1450.7Show/hide
Query:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSK-DRGGLGFRDLKLFKQAMLAK
        A+  Y MSCF+L   LC ++      FWW   + K K  W++W+KLC SK D GGLGFRDL  F QA+LAK
Subjt:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSK-DRGGLGFRDLKLFKQAMLAK

Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein1.8e-0627.69Show/hide
Query:  DASWSGQKKSGGIGWILRDSS--------WSSICQRFKQ--IKKSWPIKILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEIN
        DA+W  Q    G GW+ + +S        +S+ C+RF      ++W IK    + ++  E  DL+     V SD+ ++++ LN     +++I   + EI 
Subjt:  DASWSGQKKSGGIGWILRDSS--------WSSICQRFKQ--IKKSWPIKILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEIN

Query:  RLKNQFKEIHFDYCPRNENVAADCLARTTV
         ++N+F+ I F + PR  N  AD  A+ ++
Subjt:  RLKNQFKEIHFDYCPRNENVAADCLARTTV

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.1e-1128.86Show/hide
Query:  RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPI--KILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISF
        +W+ P     K NTDA+W  +    GIGWILR+ S   +    + + ++  +    LE +              I  ESD   ++N+LN + +    +  
Subjt:  RWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWPI--KILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISF

Query:  TIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTV----YPPPLFSVL
         +E+I +L + F+E+ F++ PR  N  AD +AR ++    Y P LFS++
Subjt:  TIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTV----YPPPLFSVL

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-2122.8Show/hide
Query:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW---------------------------
        A+ TYTM+CF LP  +C +I  + A FWW   +     HW +W  L   K  GG+GF+D++ F  A+L K +W                           
Subjt:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLW---------------------------

Query:  ----APTRV-----SNMEEHRLGARSL-------------------------QKRIPVEDDLKGK---KVQEIIDDQG-NWIAEKVLENFTIIDVETIIN
             P+ V     ++ E  R GAR++                          +R+P ++        KV ++ID+ G  W  + +   F  ++ + I  
Subjt:  ----APTRV-----SNMEEHRLGARSL-------------------------QKRIPVEDDLKGK---KVQEIIDDQG-NWIAEKVLENFTIIDVETIIN

Query:  TPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTA-ASHNKAWRNFWKSRAIPKAK-----------------------------ICDT-
           GGR   D   W       ++V S Y +  Q+ N   +    +  S N  ++  WKS+  PK +                              C + 
Subjt:  TPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTA-ASHNKAWRNFWKSRAIPKAK-----------------------------ICDT-

Query:  -RGINH----THFVGLNKSIHS------------------------NSKP-----------------NNNSMLRAIERSLDLREV---------EPNSYP
           +NH      F  L  +I S                        N  P                  N + L    R  + +EV         E     
Subjt:  -RGINH----THFVGLNKSIHS------------------------NSKP-----------------NNNSMLRAIERSLDLREV---------EPNSYP

Query:  NSQQRGKRPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDS----SW--SSICQRFKQIKKS------WPIKILEHIPSVGFEGDDLIS
         ++  G +P++    S  RWRPP     K NTDA+W+   +  GIGW+LR+      W  +    + K + ++      W +  L       F+ + +I 
Subjt:  NSQQRGKRPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDS----SW--SSICQRFKQIKKS------WPIKILEHIPSVGFEGDDLIS

Query:  VPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTV----YPPPLFSVLSS
             ESD+  +I ILN + E    +  TI+++ RL +QF E+ F + PR  N  A+ +AR ++    Y P L+S++ S
Subjt:  VPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTV----YPPPLFSVLSS

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.7e-0526.34Show/hide
Query:  DLREVEPNSYPNSQQRGKR---PELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSI-C------QRFKQIKKSWPIKILEHIPSV
        D +E   N+  N QQ G R   P   T     +W PP  +  K N DAS   +    G+GWILR+S  + I C       R    +      I     S 
Subjt:  DLREVEPNSYPNSQQRGKR---PELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSI-C------QRFKQIKKSWPIKILEHIPSV

Query:  GFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPPLFSVLSSPP
        GF    +I      E D   +  ++N +  +  ++   ++ I      F+ I F +  R +N  AD LA+  +     +S+  S P
Subjt:  GFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPPLFSVLSSPP

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-1550.7Show/hide
Query:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSK-DRGGLGFRDLKLFKQAMLAK
        A+  Y MSCF+L   LC ++      FWW   + K K  W++W+KLC SK D GGLGFRDL  F QA+LAK
Subjt:  AILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSK-DRGGLGFRDLKLFKQAMLAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAAGAAATCCTTATAGAAGCAAATGTTCAGGCAATACTGACTTATACCATGAGTTGTTTCAAACTCCCCTCAAACCTATGCGATGAGATAAACAAAATGTGTGC
TAGATTCTGGTGGGGAGAAGCAAAAGGAAAAAACAAGGCTCATTGGATAAGTTGGAGGAAACTATGTGTTAGCAAAGATAGAGGAGGCCTTGGTTTTAGAGATTTAAAGC
TTTTCAAGCAAGCCATGCTAGCAAAACTCCTTTGGGCTCCAACCCGTGTCTCTAACATGGAGGAGCATCGTTTGGGGGCGAGATCTCTTCAAAAAAGGATACCGGTGGAA
GATGATCTAAAAGGGAAGAAAGTTCAGGAGATTATAGACGATCAGGGGAACTGGATAGCAGAAAAGGTCCTGGAGAATTTCACCATCATAGATGTTGAAACCATCATTAA
CACCCCGACTGGAGGAAGAGATAGGGAGGATGAAATAATCTGGAGTAAAGAAAGAAAGGAAGTATTCTCTGTGAATAGTGCGTACCAATTGGCCTACCAGCTCTCTAACC
CAAATGAGGCATCGTCATCAACAGCAGCATCACACAACAAAGCATGGAGAAACTTCTGGAAGAGCAGAGCAATTCCAAAAGCCAAAATTTGTGACACACGAGGAATCAAC
CACACACATTTTGTGGGACTAAACAAATCTATTCACTCCAACAGCAAACCAAACAATAATTCCATGTTGAGAGCTATTGAAAGAAGCCTAGACTTGAGGGAGGTTGAGCC
TAATTCTTACCCCAATTCCCAGCAACGAGGTAAAAGGCCCGAGTTAAAGACCCTCAGGAGTCATGAGAGATGGAGACCGCCGTCGGTGAACGCTTGGAAGCTGAACACGG
ATGCATCATGGAGCGGTCAGAAGAAATCAGGCGGAATCGGATGGATTCTACGTGACTCCTCATGGTCTTCTATCTGCCAGAGATTCAAACAAATAAAAAAAAGTTGGCCC
ATAAAAATCTTGGAACACATACCTTCAGTCGGCTTTGAAGGCGACGACTTGATCTCTGTTCCCATCTTTGTCGAGTCCGACACATCAAATGTCATCAATATCCTAAATGG
CGAATATGAGGATATCTCGAAAATCTCTTTCACTATCGAAGAGATAAACCGTTTGAAGAATCAATTCAAGGAGATTCACTTCGACTACTGCCCAAGAAACGAAAATGTTG
CCGCGGATTGTCTTGCGCGAACAACGGTTTATCCCCCTCCCCTGTTTTCTGTTTTGTCTTCCCCTCCGATTATGGATGAGGGAACGGGCTTTTGGGTTGGATATCCCCCT
ATTTGGGTTAAGAACCTCTTAAATGAGAATGAGTTTTTTCGTGAAATCCTCGTCTACTTTGTTGAAGAGATTGACGAGACCAGCTGCGTTCGACTCGACTATGATGGAAG
ACGATGTCAAGTTGGGATAGTTTGCTCGCAAGGAATGCGGAGGAATCTAATCGGCATGACTCATGAGGCTCTCCGGCGCGAATTGGCCACAAAATTTTGTGAGGGGACAG
TGACAACGCAAGGGTGCAGCGACGAAGAACGGCGGCGACGCGAAGAGAAAAAGAAAACGGAACGGGCAGCGTGGGTACGACGACACGAAGATCTTGGGTTTCAGATTTGC
AGGTTCGCGAGTGCCGGTCGGCGGTTTCAGATCTACTACTCACGTGGGTACGACCAGCGGTTTCAGATCTGCAGGTTCGGAAGTGACTGGCGGTGGTTTCAGATTTGCAG
TCCACCTCATACTACCGATCGTCGTCGACCGACCACCATCGTTCACCTCCGACTACCGGTTGCGGCCGACCGCTACCACCAACCTTCAACTATAGGCCTCGGCCGACAGG
TCGTGATCGTCGACCTCCGACGACCGGCTGCCGATCGACCACCCACATCCACCTCTGACTACTTGTCGTCGCCGACCTCCGTCGACCAGCCACCATTGTCGACCTCCCAC
TACCGGTCGCTGTCGACCTCCGTTGATCGACCACCACTGTCGACCTTCGACTACTGGTTGTCGTCGACCGATCGCCACCGTCCACCTCCAACTACCGATCATCGCCGACC
TCCGTCGACCGATTGCCATCGTCAACCTCCGACTACCGACCACGACCAATCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAAGAAATCCTTATAGAAGCAAATGTTCAGGCAATACTGACTTATACCATGAGTTGTTTCAAACTCCCCTCAAACCTATGCGATGAGATAAACAAAATGTGTGC
TAGATTCTGGTGGGGAGAAGCAAAAGGAAAAAACAAGGCTCATTGGATAAGTTGGAGGAAACTATGTGTTAGCAAAGATAGAGGAGGCCTTGGTTTTAGAGATTTAAAGC
TTTTCAAGCAAGCCATGCTAGCAAAACTCCTTTGGGCTCCAACCCGTGTCTCTAACATGGAGGAGCATCGTTTGGGGGCGAGATCTCTTCAAAAAAGGATACCGGTGGAA
GATGATCTAAAAGGGAAGAAAGTTCAGGAGATTATAGACGATCAGGGGAACTGGATAGCAGAAAAGGTCCTGGAGAATTTCACCATCATAGATGTTGAAACCATCATTAA
CACCCCGACTGGAGGAAGAGATAGGGAGGATGAAATAATCTGGAGTAAAGAAAGAAAGGAAGTATTCTCTGTGAATAGTGCGTACCAATTGGCCTACCAGCTCTCTAACC
CAAATGAGGCATCGTCATCAACAGCAGCATCACACAACAAAGCATGGAGAAACTTCTGGAAGAGCAGAGCAATTCCAAAAGCCAAAATTTGTGACACACGAGGAATCAAC
CACACACATTTTGTGGGACTAAACAAATCTATTCACTCCAACAGCAAACCAAACAATAATTCCATGTTGAGAGCTATTGAAAGAAGCCTAGACTTGAGGGAGGTTGAGCC
TAATTCTTACCCCAATTCCCAGCAACGAGGTAAAAGGCCCGAGTTAAAGACCCTCAGGAGTCATGAGAGATGGAGACCGCCGTCGGTGAACGCTTGGAAGCTGAACACGG
ATGCATCATGGAGCGGTCAGAAGAAATCAGGCGGAATCGGATGGATTCTACGTGACTCCTCATGGTCTTCTATCTGCCAGAGATTCAAACAAATAAAAAAAAGTTGGCCC
ATAAAAATCTTGGAACACATACCTTCAGTCGGCTTTGAAGGCGACGACTTGATCTCTGTTCCCATCTTTGTCGAGTCCGACACATCAAATGTCATCAATATCCTAAATGG
CGAATATGAGGATATCTCGAAAATCTCTTTCACTATCGAAGAGATAAACCGTTTGAAGAATCAATTCAAGGAGATTCACTTCGACTACTGCCCAAGAAACGAAAATGTTG
CCGCGGATTGTCTTGCGCGAACAACGGTTTATCCCCCTCCCCTGTTTTCTGTTTTGTCTTCCCCTCCGATTATGGATGAGGGAACGGGCTTTTGGGTTGGATATCCCCCT
ATTTGGGTTAAGAACCTCTTAAATGAGAATGAGTTTTTTCGTGAAATCCTCGTCTACTTTGTTGAAGAGATTGACGAGACCAGCTGCGTTCGACTCGACTATGATGGAAG
ACGATGTCAAGTTGGGATAGTTTGCTCGCAAGGAATGCGGAGGAATCTAATCGGCATGACTCATGAGGCTCTCCGGCGCGAATTGGCCACAAAATTTTGTGAGGGGACAG
TGACAACGCAAGGGTGCAGCGACGAAGAACGGCGGCGACGCGAAGAGAAAAAGAAAACGGAACGGGCAGCGTGGGTACGACGACACGAAGATCTTGGGTTTCAGATTTGC
AGGTTCGCGAGTGCCGGTCGGCGGTTTCAGATCTACTACTCACGTGGGTACGACCAGCGGTTTCAGATCTGCAGGTTCGGAAGTGACTGGCGGTGGTTTCAGATTTGCAG
TCCACCTCATACTACCGATCGTCGTCGACCGACCACCATCGTTCACCTCCGACTACCGGTTGCGGCCGACCGCTACCACCAACCTTCAACTATAGGCCTCGGCCGACAGG
TCGTGATCGTCGACCTCCGACGACCGGCTGCCGATCGACCACCCACATCCACCTCTGACTACTTGTCGTCGCCGACCTCCGTCGACCAGCCACCATTGTCGACCTCCCAC
TACCGGTCGCTGTCGACCTCCGTTGATCGACCACCACTGTCGACCTTCGACTACTGGTTGTCGTCGACCGATCGCCACCGTCCACCTCCAACTACCGATCATCGCCGACC
TCCGTCGACCGATTGCCATCGTCAACCTCCGACTACCGACCACGACCAATCGTAA
Protein sequenceShow/hide protein sequence
MGKEILIEANVQAILTYTMSCFKLPSNLCDEINKMCARFWWGEAKGKNKAHWISWRKLCVSKDRGGLGFRDLKLFKQAMLAKLLWAPTRVSNMEEHRLGARSLQKRIPVE
DDLKGKKVQEIIDDQGNWIAEKVLENFTIIDVETIINTPTGGRDREDEIIWSKERKEVFSVNSAYQLAYQLSNPNEASSSTAASHNKAWRNFWKSRAIPKAKICDTRGIN
HTHFVGLNKSIHSNSKPNNNSMLRAIERSLDLREVEPNSYPNSQQRGKRPELKTLRSHERWRPPSVNAWKLNTDASWSGQKKSGGIGWILRDSSWSSICQRFKQIKKSWP
IKILEHIPSVGFEGDDLISVPIFVESDTSNVINILNGEYEDISKISFTIEEINRLKNQFKEIHFDYCPRNENVAADCLARTTVYPPPLFSVLSSPPIMDEGTGFWVGYPP
IWVKNLLNENEFFREILVYFVEEIDETSCVRLDYDGRRCQVGIVCSQGMRRNLIGMTHEALRRELATKFCEGTVTTQGCSDEERRRREEKKKTERAAWVRRHEDLGFQIC
RFASAGRRFQIYYSRGYDQRFQICRFGSDWRWFQICSPPHTTDRRRPTTIVHLRLPVAADRYHQPSTIGLGRQVVIVDLRRPAADRPPTSTSDYLSSPTSVDQPPLSTSH
YRSLSTSVDRPPLSTFDYWLSSTDRHRPPPTTDHRRPPSTDCHRQPPTTDHDQS